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The map label for this gene is ydhJ [C]

Identifier: 17231139

GI number: 17231139

Start: 4400164

End: 4401468

Strand: Direct

Name: ydhJ [C]

Synonym: alr3647

Alternate gene names: 17231139

Gene position: 4400164-4401468 (Clockwise)

Preceding gene: 17231138

Following gene: 17231140

Centisome position: 68.6

GC content: 46.74

Gene sequence:

>1305_bases
ATGAATCAAAAACTGTTATTTAAGCCTGCTAATCAAGGGGTAATTGCATTAGTGATTGCAGCTACTGCCATGACATCGGG
AATTGTTTTGTACGCAGTTAGTCAGTTTGGGCAAGTTAGTAAAACTAGTGCATCGGATGCTGTACCAACTGAGGCGATCG
CTCCCAAGATAACTGCTTTGGGTAGACTAGAACCAGAAACAGAAGTGATCAGTTTATCTGCACCATTAGCCTTAGATGGC
GATCGCATTGCTCAAATCCTGGTGGAAGAAGGTGATGAAGTGCAAGCTGGACAGGTAGTAGCAATTTTAGACTCCCGCGC
CCGCTTGCAAACCGCCGTACTCCAAGCCGAAAAACAAATACGCGTTGCCCAAGCCAAACTCAATCAAGTCAAGGCTGGAG
CCAAAACTGGCGATATCCGCGCCCAGCAAGCTAGCGTGGAACGCTTACAAGCCCAATCCCAAGGCGATAGAACAGGACAA
CAACAAACCATTGCGCGGATAGAAGCGCAATGGCAAGGTGACAGAATCGCCCAAGAAGCCACAATTAGGAAGCTAGAGGC
AGAACTGAAAAATGCCGAAGCCGAATATCAACGCTATCAGCAGCTTTACTCAGAAGGGGCAATTTCTAGTTCAGCAATTG
ATACCAGACGCTTGAGTGTGGAAACTGCCAAAGAGCAACTAGACGAAGCCAAAGCAGTGCTGAACCGGATTAATTCCACT
GCTAGCAAAGAACTAGCAGAAGCCAAAGTTGCACTGAACCGGATTAACGCCACCAGTAACAAGCAAATTAGCGAAGCCAA
AGCCACACTCACCAGTATTGCCGAAGTTAGACCAGTAGATGTGCAAGCAGCACAAACAGAAGTTGAAGAGGCGATCGCTT
CTCTCAAACGCGCCACAACCGACCTAGAAGCAGCTTATATCAGAGCGCCACAGGCGGGACAGATTCTCAAAATTCATACC
CGTGTCGGCGAAAAAATCAGTGATGATGGCATTGCTGACTTAGCACAAACCGACCAAATGTTAGCTATTGCCGAAGTCTA
TCAAACTGATATCGGTAAAGTGAAACTGGGACAGCAAGCAGTCATTACCAGCCAAGCCTTTGGTGGCGAATTGCGAGGAA
AAGTGTCCCAAATTGGCTTGCAGGTAGGACGACAAAACGTATTTAGCAACCAGCCAGGAGAGAACCTAGATAGCCGAGTC
GTTGAAGTCAAAATTCGCCTCAACCCTGAAGACAGCAAAAAAGTTGCAAGTTTCACAAACTTGCAAGTGCAAGCAGCAAT
TGAAACAATTCAAAATTCCAAATGA

Upstream 100 bases:

>100_bases
TGACACTTTATTTAAAAAATAATCAAACAAATAAAATGGCTAACTCTTATCTTAATTGATTTCATTGATCGGTTAAATTA
ACTTATTTTGTGAGGAGAAG

Downstream 100 bases:

>100_bases
AAGAATTTTCAGAAAACTATTGACTAACGACTAAATAATATTATGTTTTCTCAAATTTTTCGCAAAACTCCGCTAGCTTG
GCGGCAGTTAATGAAGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: DevB Family ABC Exporter Membrane Fusion Protein; ABC Transporter; Secretion Protein HlyD; DevB-Like Secretion Protein; Secretion Protein HlyD Family Protein; Auxiliary Transport Protein MFP Family; ABC-Transporter Membrane Fusion Protein; Membrane-Fusion Protein; Transporter MFP Family; Membrane Fusion Protein Family Protein; Efflux Transporter RND Family MFP Subunit; Glycolipid ABC Transporter Membrane Protein; RND Family Efflux Transporter MFP Subunit; ABC-Transporter DevB Family Protein; Secretion Protein HlyD Family Protein DevB; Multidrug Resistance Efflux Pump-Like; Membrane Fusion Protein; ABC-Transporter DevB-Like Protein; DevB-Like ABC Transporter Membrane Fusion Protein; ABC-Transporter DevB-Like-Protein; ABC-Transporter Component; ABC Transporter Component; ABC Transporter Component-Like; Membrane Fusion Protein DevB; RTX Secretion Protein D; Permease Protein DevB-Like Protein

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MNQKLLFKPANQGVIALVIAATAMTSGIVLYAVSQFGQVSKTSASDAVPTEAIAPKITALGRLEPETEVISLSAPLALDG
DRIAQILVEEGDEVQAGQVVAILDSRARLQTAVLQAEKQIRVAQAKLNQVKAGAKTGDIRAQQASVERLQAQSQGDRTGQ
QQTIARIEAQWQGDRIAQEATIRKLEAELKNAEAEYQRYQQLYSEGAISSSAIDTRRLSVETAKEQLDEAKAVLNRINST
ASKELAEAKVALNRINATSNKQISEAKATLTSIAEVRPVDVQAAQTEVEEAIASLKRATTDLEAAYIRAPQAGQILKIHT
RVGEKISDDGIADLAQTDQMLAIAEVYQTDIGKVKLGQQAVITSQAFGGELRGKVSQIGLQVGRQNVFSNQPGENLDSRV
VEVKIRLNPEDSKKVASFTNLQVQAAIETIQNSK

Sequences:

>Translated_434_residues
MNQKLLFKPANQGVIALVIAATAMTSGIVLYAVSQFGQVSKTSASDAVPTEAIAPKITALGRLEPETEVISLSAPLALDG
DRIAQILVEEGDEVQAGQVVAILDSRARLQTAVLQAEKQIRVAQAKLNQVKAGAKTGDIRAQQASVERLQAQSQGDRTGQ
QQTIARIEAQWQGDRIAQEATIRKLEAELKNAEAEYQRYQQLYSEGAISSSAIDTRRLSVETAKEQLDEAKAVLNRINST
ASKELAEAKVALNRINATSNKQISEAKATLTSIAEVRPVDVQAAQTEVEEAIASLKRATTDLEAAYIRAPQAGQILKIHT
RVGEKISDDGIADLAQTDQMLAIAEVYQTDIGKVKLGQQAVITSQAFGGELRGKVSQIGLQVGRQNVFSNQPGENLDSRV
VEVKIRLNPEDSKKVASFTNLQVQAAIETIQNSK
>Mature_434_residues
MNQKLLFKPANQGVIALVIAATAMTSGIVLYAVSQFGQVSKTSASDAVPTEAIAPKITALGRLEPETEVISLSAPLALDG
DRIAQILVEEGDEVQAGQVVAILDSRARLQTAVLQAEKQIRVAQAKLNQVKAGAKTGDIRAQQASVERLQAQSQGDRTGQ
QQTIARIEAQWQGDRIAQEATIRKLEAELKNAEAEYQRYQQLYSEGAISSSAIDTRRLSVETAKEQLDEAKAVLNRINST
ASKELAEAKVALNRINATSNKQISEAKATLTSIAEVRPVDVQAAQTEVEEAIASLKRATTDLEAAYIRAPQAGQILKIHT
RVGEKISDDGIADLAQTDQMLAIAEVYQTDIGKVKLGQQAVITSQAFGGELRGKVSQIGLQVGRQNVFSNQPGENLDSRV
VEVKIRLNPEDSKKVASFTNLQVQAAIETIQNSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46710; Mature: 46710

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQKLLFKPANQGVIALVIAATAMTSGIVLYAVSQFGQVSKTSASDAVPTEAIAPKITAL
CCCCEEEECCCCCCEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHH
GRLEPETEVISLSAPLALDGDRIAQILVEEGDEVQAGQVVAILDSRARLQTAVLQAEKQI
CCCCCCCEEEEECCCCEECHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
RVAQAKLNQVKAGAKTGDIRAQQASVERLQAQSQGDRTGQQQTIARIEAQWQGDRIAQEA
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH
TIRKLEAELKNAEAEYQRYQQLYSEGAISSSAIDTRRLSVETAKEQLDEAKAVLNRINST
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASKELAEAKVALNRINATSNKQISEAKATLTSIAEVRPVDVQAAQTEVEEAIASLKRATT
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DLEAAYIRAPQAGQILKIHTRVGEKISDDGIADLAQTDQMLAIAEVYQTDIGKVKLGQQA
HHHHHHEECCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCHH
VITSQAFGGELRGKVSQIGLQVGRQNVFSNQPGENLDSRVVEVKIRLNPEDSKKVASFTN
EEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHH
LQVQAAIETIQNSK
HHHHHHHHHHHCCC
>Mature Secondary Structure
MNQKLLFKPANQGVIALVIAATAMTSGIVLYAVSQFGQVSKTSASDAVPTEAIAPKITAL
CCCCEEEECCCCCCEEHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHH
GRLEPETEVISLSAPLALDGDRIAQILVEEGDEVQAGQVVAILDSRARLQTAVLQAEKQI
CCCCCCCEEEEECCCCEECHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
RVAQAKLNQVKAGAKTGDIRAQQASVERLQAQSQGDRTGQQQTIARIEAQWQGDRIAQEA
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH
TIRKLEAELKNAEAEYQRYQQLYSEGAISSSAIDTRRLSVETAKEQLDEAKAVLNRINST
HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASKELAEAKVALNRINATSNKQISEAKATLTSIAEVRPVDVQAAQTEVEEAIASLKRATT
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DLEAAYIRAPQAGQILKIHTRVGEKISDDGIADLAQTDQMLAIAEVYQTDIGKVKLGQQA
HHHHHHEECCCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCHH
VITSQAFGGELRGKVSQIGLQVGRQNVFSNQPGENLDSRVVEVKIRLNPEDSKKVASFTN
EEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHH
LQVQAAIETIQNSK
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA