| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231108
Identifier: 17231108
GI number: 17231108
Start: 4367527
End: 4367841
Strand: Reverse
Name: 17231108
Synonym: all3616
Alternate gene names: NA
Gene position: 4367841-4367527 (Counterclockwise)
Preceding gene: 17231109
Following gene: 17231107
Centisome position: 68.1
GC content: 45.08
Gene sequence:
>315_bases ATGCAGACTGGGAGAGACTCCCATGAGAATAATTATTCAATTGATCTGCTCCGTCTATTGCCCCTTGAACCGACGGAGTA TTGTCGCCGTTGGGTTAGACAAGAAGCAGGACGTAATTATCGCAAAGCCTGCATTAACGCGATCGCCCAAGTTACAGGTA CTAGCCCAAAAACTGTTAAAGACTGGGGAACTAATTTTCGCCGACGACCTAAATACGTTACCCGCATATTACGGCAAGCA GACTTGCTCAACCAATTTAGACAACTTGTTGCAAAAGGAATTGTGGCTTTACCTCCAGACTTCCCTCAAGAATAA
Upstream 100 bases:
>100_bases TTTAGCAAGCACAGGATTCATAGGAGTAAAAGGTTAGCTGAGTGGCATTTCCTCATACTCCCTGCCTCTGCTGGGTTAAT CTGACTCATCAAAACCAAAG
Downstream 100 bases:
>100_bases GTAAAAGCGATCGCTACTCACGACCAATTGCTCCAAAAACCCCTTGCTGTTAACACAAGGAGAATCTTAGGCTGAGGTAC ATAGGTACTAACTATGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MQTGRDSHENNYSIDLLRLLPLEPTEYCRRWVRQEAGRNYRKACINAIAQVTGTSPKTVKDWGTNFRRRPKYVTRILRQA DLLNQFRQLVAKGIVALPPDFPQE
Sequences:
>Translated_104_residues MQTGRDSHENNYSIDLLRLLPLEPTEYCRRWVRQEAGRNYRKACINAIAQVTGTSPKTVKDWGTNFRRRPKYVTRILRQA DLLNQFRQLVAKGIVALPPDFPQE >Mature_104_residues MQTGRDSHENNYSIDLLRLLPLEPTEYCRRWVRQEAGRNYRKACINAIAQVTGTSPKTVKDWGTNFRRRPKYVTRILRQA DLLNQFRQLVAKGIVALPPDFPQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12157; Mature: 12157
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTGRDSHENNYSIDLLRLLPLEPTEYCRRWVRQEAGRNYRKACINAIAQVTGTSPKTVK CCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHH DWGTNFRRRPKYVTRILRQADLLNQFRQLVAKGIVALPPDFPQE HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MQTGRDSHENNYSIDLLRLLPLEPTEYCRRWVRQEAGRNYRKACINAIAQVTGTSPKTVK CCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHH DWGTNFRRRPKYVTRILRQADLLNQFRQLVAKGIVALPPDFPQE HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA