| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17231072
Identifier: 17231072
GI number: 17231072
Start: 4324782
End: 4325945
Strand: Reverse
Name: 17231072
Synonym: all3580
Alternate gene names: NA
Gene position: 4325945-4324782 (Counterclockwise)
Preceding gene: 17231073
Following gene: 17231071
Centisome position: 67.45
GC content: 44.93
Gene sequence:
>1164_bases ATGACTGCTAACCCCACAGTATTCACCTTTGCTGACTCGACAGACCTGATTTTAGAAATCCCTGACTCTACAACAGCAAG TATTGACAGCCAGTTATTTTCTCATCCTTACTCAGGTTATCAAGCTTATATCAACGAACTTTGCCTGAGAGCAGTCTTGC CGTGGTTACAGGAAGACTTTTCCACACAGGCAAAGGTGTGGCCATCCACCATGACTCTAGCCAGTCTTTGGGAACTAGTG AATGGAACCGCAGTCACAATTGACGGAAAGAGATTTATTTTGGTTCCCAGTGAAAATATTGATCACAGCGAATTGCGTGT GCAGCAAGAATGGGTAGATTTACCAACCTGGGCAGGGGATTATTATTTAGCGGTGCAAGTAGATGGGGAATATGTAGAAG TTTGGGGCTACTGTACCCATACGCAACTGAAGAATCAAGGCCAATATGATCCAGGCGATCGCACCTATTCGTTAGATATA ACTGATATTGTTAAAGATCTCGGTGTGTTAGCTGTAGCGCAGGATTTATGCCCTGATGAAGTCACACGTAATGCCCTAGC TGCATTACCAAACCTACCCCAGGAACAAGCCCAAAATCTCATCACCCGTTTAAGCAATCCAGAAATCATTAACCCCCGGT TAGCCATCCCTTTTCAACTATGGGGCGCATTAATTGAACATGGCGGCTGGCGGCAAAGTTTATATGAACGCCGTTTGGGA CTGCCTGAGCAGAGATTGGTACTACAATGGTTGCAAAGTGGTGTGTCTCAAGTAGCACAGAATATGGGTTGGGGACGCTT GAATTTACAATTAAGTGCGGCTGGGGCTAGGAGTGTAGAAGATAGACAAGCGGGTGTCACCTTGTCTCGCCGATTAACCA TTGCTGGTCAACTATACGAACTGTTGATTACACCACAAGGTGAACCAGACGCATCTTATTGGCGCTTTGAATTACGGAAT GCAACCGTAGGTGCAGTTATTCCCGGTGGCTTTAAACTCCGACTCCTCACAGAAGACCTACAGTCATTTCCCAATAATGA AGATATTGCCACAAATGCTGTAGAACAACTCTACGTTGAAGTTGCTTTAGAGGCTGGAGAAGGCATAGTATGGGAAATTG AACCGCTACCGGAAAATTATGACCGAGAAATTCTCAAATTTTAA
Upstream 100 bases:
>100_bases ACTATTAATAAAGAATTGGAGATTTTCACGTCTGTTCGGGAAACAGCAATTTTCCCAGCTTGCCCCAAACCCAGCCAAAG AAATCCCCGGAGTAAACCCT
Downstream 100 bases:
>100_bases GCTGTTTTGGGGCTTTTTTTATTGATAATGTGGATAAGCATTCTTTCTCAATCCACATGAGATAAAAAACCATGAGATTA CAACACAACAAACAAATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MTANPTVFTFADSTDLILEIPDSTTASIDSQLFSHPYSGYQAYINELCLRAVLPWLQEDFSTQAKVWPSTMTLASLWELV NGTAVTIDGKRFILVPSENIDHSELRVQQEWVDLPTWAGDYYLAVQVDGEYVEVWGYCTHTQLKNQGQYDPGDRTYSLDI TDIVKDLGVLAVAQDLCPDEVTRNALAALPNLPQEQAQNLITRLSNPEIINPRLAIPFQLWGALIEHGGWRQSLYERRLG LPEQRLVLQWLQSGVSQVAQNMGWGRLNLQLSAAGARSVEDRQAGVTLSRRLTIAGQLYELLITPQGEPDASYWRFELRN ATVGAVIPGGFKLRLLTEDLQSFPNNEDIATNAVEQLYVEVALEAGEGIVWEIEPLPENYDREILKF
Sequences:
>Translated_387_residues MTANPTVFTFADSTDLILEIPDSTTASIDSQLFSHPYSGYQAYINELCLRAVLPWLQEDFSTQAKVWPSTMTLASLWELV NGTAVTIDGKRFILVPSENIDHSELRVQQEWVDLPTWAGDYYLAVQVDGEYVEVWGYCTHTQLKNQGQYDPGDRTYSLDI TDIVKDLGVLAVAQDLCPDEVTRNALAALPNLPQEQAQNLITRLSNPEIINPRLAIPFQLWGALIEHGGWRQSLYERRLG LPEQRLVLQWLQSGVSQVAQNMGWGRLNLQLSAAGARSVEDRQAGVTLSRRLTIAGQLYELLITPQGEPDASYWRFELRN ATVGAVIPGGFKLRLLTEDLQSFPNNEDIATNAVEQLYVEVALEAGEGIVWEIEPLPENYDREILKF >Mature_386_residues TANPTVFTFADSTDLILEIPDSTTASIDSQLFSHPYSGYQAYINELCLRAVLPWLQEDFSTQAKVWPSTMTLASLWELVN GTAVTIDGKRFILVPSENIDHSELRVQQEWVDLPTWAGDYYLAVQVDGEYVEVWGYCTHTQLKNQGQYDPGDRTYSLDIT DIVKDLGVLAVAQDLCPDEVTRNALAALPNLPQEQAQNLITRLSNPEIINPRLAIPFQLWGALIEHGGWRQSLYERRLGL PEQRLVLQWLQSGVSQVAQNMGWGRLNLQLSAAGARSVEDRQAGVTLSRRLTIAGQLYELLITPQGEPDASYWRFELRNA TVGAVIPGGFKLRLLTEDLQSFPNNEDIATNAVEQLYVEVALEAGEGIVWEIEPLPENYDREILKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43464; Mature: 43333
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANPTVFTFADSTDLILEIPDSTTASIDSQLFSHPYSGYQAYINELCLRAVLPWLQEDF CCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH STQAKVWPSTMTLASLWELVNGTAVTIDGKRFILVPSENIDHSELRVQQEWVDLPTWAGD CCCCEECCHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCC YYLAVQVDGEYVEVWGYCTHTQLKNQGQYDPGDRTYSLDITDIVKDLGVLAVAQDLCPDE EEEEEEECCCEEEEEEEEEHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCHHH VTRNALAALPNLPQEQAQNLITRLSNPEIINPRLAIPFQLWGALIEHGGWRQSLYERRLG HHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCEECHHHHHHHHHHCCCHHHHHHHHHCC LPEQRLVLQWLQSGVSQVAQNMGWGRLNLQLSAAGARSVEDRQAGVTLSRRLTIAGQLYE CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHCCCEEEHEEEHHEEEEE LLITPQGEPDASYWRFELRNATVGAVIPGGFKLRLLTEDLQSFPNNEDIATNAVEQLYVE EEECCCCCCCCCEEEEEECCCEEEEEECCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHH VALEAGEGIVWEIEPLPENYDREILKF HHEECCCCEEEEEECCCCCCCHHHHCC >Mature Secondary Structure TANPTVFTFADSTDLILEIPDSTTASIDSQLFSHPYSGYQAYINELCLRAVLPWLQEDF CCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH STQAKVWPSTMTLASLWELVNGTAVTIDGKRFILVPSENIDHSELRVQQEWVDLPTWAGD CCCCEECCHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCC YYLAVQVDGEYVEVWGYCTHTQLKNQGQYDPGDRTYSLDITDIVKDLGVLAVAQDLCPDE EEEEEEECCCEEEEEEEEEHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCHHH VTRNALAALPNLPQEQAQNLITRLSNPEIINPRLAIPFQLWGALIEHGGWRQSLYERRLG HHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCEECHHHHHHHHHHCCCHHHHHHHHHCC LPEQRLVLQWLQSGVSQVAQNMGWGRLNLQLSAAGARSVEDRQAGVTLSRRLTIAGQLYE CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHCCCEEEHEEEHHEEEEE LLITPQGEPDASYWRFELRNATVGAVIPGGFKLRLLTEDLQSFPNNEDIATNAVEQLYVE EEECCCCCCCCCEEEEEECCCEEEEEECCCEEEEEEHHHHHHCCCCCCHHHHHHHHHHHH VALEAGEGIVWEIEPLPENYDREILKF HHEECCCCEEEEEECCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA