| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is mnmG [H]
Identifier: 17231053
GI number: 17231053
Start: 4298709
End: 4300631
Strand: Direct
Name: mnmG [H]
Synonym: alr3561
Alternate gene names: 17231053
Gene position: 4298709-4300631 (Clockwise)
Preceding gene: 17231046
Following gene: 17231054
Centisome position: 67.02
GC content: 47.89
Gene sequence:
>1923_bases ATGACCATGCACAATTCAGTGGAATTTCAAGACGCTTTTGATGTCATTGTCGTCGGTGCAGGTCACTCCGGTTGCGAAGC AGCACTTGCTACTGCCCGCCTCGGCTGTCGTACCTTGTTACTGACGCTCAATTTGGATAAAATTGCTTGGCAACCTTGTA ACCCTGCTGTGGGTGGGCCTGCCAAATCCCAGTTGACCCATGAGGTAGATGCCTTGGGTGGGGAAATTGGCAAGATGGCG GATCGCACATATCTGCAAAAGCGCATCCTCAACTCTTCACGAGGGCCTGCGGTGTGGGCATTACGCGCCCAAACTGACAA GCGGGAATATGCGGCTATTATGAAAAATATTGTTGAGAATCAAGAGAACTTGAGCATCCGCGAGAGTATGGTGACGGACT TGGTACTGGGTGCTAACGATGAAGTGATAGGTGTGGAAACTTACTTTGGCGTGGCTTTCCAGTGTAAAGCTGTAATTTTA ACCACAGGTACATTTCTGGGTGGGAAAATTTGGGTAGGGAACAAATCAATGCCAGCCGGACGTGCTGGGGAGTTTGCGGC TGAGGGATTAACCGAAACCCTAAATCGTTTGGGATTTGAAACTGGTAGGTTGAAAACTGGTACACCCGCGCGGGTAGATA AGCGGTCAGTAGATTACAGTAAGATGCAACTCCAGCCAGGGGATGCGGAAGTGCGTTGGTTTAGTTTTGACCCAGATGTG TGGGTGGAACGGGAACAGCTACCTTGTCACATGACCCGCACCACCCCCGAAACCCATCGCCTGATTCGAGAAAACTTGCA CCTATCGCCTGTGTATGGTGGTTGGGTAGAAGCCAAAGGCCCCCGTTATTGCCCCAGTATAGAAGACAAAATTGTCCGCT TTGTTGATAAAGAAAGCCATCAAATCTTTATTGAACCAGAGGGACGGGATATTCCTGAATTATATATCCAAGGGTTTTCT ACAGGGTTACCAGAAAATTTGCAACTACAGATGCTACGTAGTCTCCCTGGGTTGGAAAATTGCGTAATGTTACGTCCAGC TTATGCTGTGGAATATGACTACTTACCCGCAACTCAGTGTTACCCCACACTGATGACAAAGAAGATTGCTGGCTTGTTTT GTGCGGGACAGGTGAATGGTACAACCGGTTATGAAGAAGCCGCAGCCCAAGGCATTGTGGCCGGAATTAATGCGGCGCGG TTTGTTCGAGATGAGGAAATGATAGTTTTCCCCCGTGAACACAGTTACTTAGGAACTTTAGTTGATGACCTGTGTACAAA AGACCTCCGCGAACCTTACCGGATGCTGACCAGTCGTTCCGAATATCGCTTGCTGCTGCGTTCTGATAACGCTGACCAGC GCCTAACTCCTTTAGGAAGGGAAATTGGCTTAATAGATGACCGTCGTTGGCAAATGTTTACCCGCAAACAAGAGCAGATT ACAGGTGAGAAAGAACGCCTGTATGCTACCAGGGTAAAAGAAAATGATGACGTAGGCAAGGCGATCGCCTCTAATACCCA ACAAGCCATCAAAGGTTCAATCACCTTGGCTGACTTGCTGCGTCGCCCTGGGTTCCATTACGTAGACCTCGATAGATATG GGTTAGGAAACCCCGAACTTACCCCAGCCGAAAAAGAAGGGGCGGAAATTGACATCAAATACTCTGGTTATCTCGCCAGG CAACAAAGCCAAATCGAACAAATTGCCCGTCAAGCACAGCGCCAATTACCAGGAGATTTAGATTACACAACTGTTGACAC CCTCTCCAAAGAAGCGCGGGAAAAACTTAATAAAGTCAAACCCTTGACTATTGGTCAAGCAGCCCGAATTGGTGGAGTCA ATCCAGCCGATATCAACGCCTTATTAATTTATTTAGAATTGCGTCAAAGCAAGCACCAGAAAGGATTAGCCGTTTTACCT TAA
Upstream 100 bases:
>100_bases TAACTCGATTTAGTTTTTTGTCAAAGGTTAGCCTACATGAAATCACTGGCTAGATTAGGTTAGAATCAGGAATAAATCTC AGCTTGTTAATCCTGTACGT
Downstream 100 bases:
>100_bases CTTCATCTTCATCAAGGGTGAGTATAGTAGAGGGAGGGATGGGTATGATAGATGACAAGAATCCAGAACTGACATCATCA ACTGATCCCCGCTTTCGCGT
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MTMHNSVEFQDAFDVIVVGAGHSGCEAALATARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMA DRTYLQKRILNSSRGPAVWALRAQTDKREYAAIMKNIVENQENLSIRESMVTDLVLGANDEVIGVETYFGVAFQCKAVIL TTGTFLGGKIWVGNKSMPAGRAGEFAAEGLTETLNRLGFETGRLKTGTPARVDKRSVDYSKMQLQPGDAEVRWFSFDPDV WVEREQLPCHMTRTTPETHRLIRENLHLSPVYGGWVEAKGPRYCPSIEDKIVRFVDKESHQIFIEPEGRDIPELYIQGFS TGLPENLQLQMLRSLPGLENCVMLRPAYAVEYDYLPATQCYPTLMTKKIAGLFCAGQVNGTTGYEEAAAQGIVAGINAAR FVRDEEMIVFPREHSYLGTLVDDLCTKDLREPYRMLTSRSEYRLLLRSDNADQRLTPLGREIGLIDDRRWQMFTRKQEQI TGEKERLYATRVKENDDVGKAIASNTQQAIKGSITLADLLRRPGFHYVDLDRYGLGNPELTPAEKEGAEIDIKYSGYLAR QQSQIEQIARQAQRQLPGDLDYTTVDTLSKEAREKLNKVKPLTIGQAARIGGVNPADINALLIYLELRQSKHQKGLAVLP
Sequences:
>Translated_640_residues MTMHNSVEFQDAFDVIVVGAGHSGCEAALATARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMA DRTYLQKRILNSSRGPAVWALRAQTDKREYAAIMKNIVENQENLSIRESMVTDLVLGANDEVIGVETYFGVAFQCKAVIL TTGTFLGGKIWVGNKSMPAGRAGEFAAEGLTETLNRLGFETGRLKTGTPARVDKRSVDYSKMQLQPGDAEVRWFSFDPDV WVEREQLPCHMTRTTPETHRLIRENLHLSPVYGGWVEAKGPRYCPSIEDKIVRFVDKESHQIFIEPEGRDIPELYIQGFS TGLPENLQLQMLRSLPGLENCVMLRPAYAVEYDYLPATQCYPTLMTKKIAGLFCAGQVNGTTGYEEAAAQGIVAGINAAR FVRDEEMIVFPREHSYLGTLVDDLCTKDLREPYRMLTSRSEYRLLLRSDNADQRLTPLGREIGLIDDRRWQMFTRKQEQI TGEKERLYATRVKENDDVGKAIASNTQQAIKGSITLADLLRRPGFHYVDLDRYGLGNPELTPAEKEGAEIDIKYSGYLAR QQSQIEQIARQAQRQLPGDLDYTTVDTLSKEAREKLNKVKPLTIGQAARIGGVNPADINALLIYLELRQSKHQKGLAVLP >Mature_639_residues TMHNSVEFQDAFDVIVVGAGHSGCEAALATARLGCRTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMAD RTYLQKRILNSSRGPAVWALRAQTDKREYAAIMKNIVENQENLSIRESMVTDLVLGANDEVIGVETYFGVAFQCKAVILT TGTFLGGKIWVGNKSMPAGRAGEFAAEGLTETLNRLGFETGRLKTGTPARVDKRSVDYSKMQLQPGDAEVRWFSFDPDVW VEREQLPCHMTRTTPETHRLIRENLHLSPVYGGWVEAKGPRYCPSIEDKIVRFVDKESHQIFIEPEGRDIPELYIQGFST GLPENLQLQMLRSLPGLENCVMLRPAYAVEYDYLPATQCYPTLMTKKIAGLFCAGQVNGTTGYEEAAAQGIVAGINAARF VRDEEMIVFPREHSYLGTLVDDLCTKDLREPYRMLTSRSEYRLLLRSDNADQRLTPLGREIGLIDDRRWQMFTRKQEQIT GEKERLYATRVKENDDVGKAIASNTQQAIKGSITLADLLRRPGFHYVDLDRYGLGNPELTPAEKEGAEIDIKYSGYLARQ QSQIEQIARQAQRQLPGDLDYTTVDTLSKEAREKLNKVKPLTIGQAARIGGVNPADINALLIYLELRQSKHQKGLAVLP
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=644, Percent_Identity=41.1490683229814, Blast_Score=430, Evalue=1e-120, Organism=Homo sapiens, GI19882217, Length=669, Percent_Identity=39.6113602391629, Blast_Score=416, Evalue=1e-116, Organism=Homo sapiens, GI183227703, Length=684, Percent_Identity=38.7426900584795, Blast_Score=410, Evalue=1e-114, Organism=Escherichia coli, GI2367273, Length=619, Percent_Identity=49.2730210016155, Blast_Score=587, Evalue=1e-169, Organism=Caenorhabditis elegans, GI17534255, Length=630, Percent_Identity=39.8412698412698, Blast_Score=438, Evalue=1e-123, Organism=Saccharomyces cerevisiae, GI6321202, Length=646, Percent_Identity=42.2600619195046, Blast_Score=464, Evalue=1e-131, Organism=Drosophila melanogaster, GI24658174, Length=636, Percent_Identity=41.9811320754717, Blast_Score=439, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 71426; Mature: 71295
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMHNSVEFQDAFDVIVVGAGHSGCEAALATARLGCRTLLLTLNLDKIAWQPCNPAVGGP CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEEEEHHHHCCCCCCCCCCCC AKSQLTHEVDALGGEIGKMADRTYLQKRILNSSRGPAVWALRAQTDKREYAAIMKNIVEN HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCC QENLSIRESMVTDLVLGANDEVIGVETYFGVAFQCKAVILTTGTFLGGKIWVGNKSMPAG CCCCHHHHHHHHHHHCCCCCCEEEEEHHHCEEEEEEEEEEEECCEECCEEEECCCCCCCC RAGEFAAEGLTETLNRLGFETGRLKTGTPARVDKRSVDYSKMQLQPGDAEVRWFSFDPDV CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCEEEEEECCCCC WVEREQLPCHMTRTTPETHRLIRENLHLSPVYGGWVEAKGPRYCPSIEDKIVRFVDKESH EEECCCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCC QIFIEPEGRDIPELYIQGFSTGLPENLQLQMLRSLPGLENCVMLRPAYAVEYDYLPATQC EEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEECCCCEEEECCCCCHHH YPTLMTKKIAGLFCAGQVNGTTGYEEAAAQGIVAGINAARFVRDEEMIVFPREHSYLGTL HHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCHHHHH VDDLCTKDLREPYRMLTSRSEYRLLLRSDNADQRLTPLGREIGLIDDRRWQMFTRKQEQI HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH TGEKERLYATRVKENDDVGKAIASNTQQAIKGSITLADLLRRPGFHYVDLDRYGLGNPEL CCCHHHEEHHHCCCCCCHHHHHHHCHHHHHHCCCHHHHHHHCCCCCEEECCCCCCCCCCC TPAEKEGAEIDIKYSGYLARQQSQIEQIARQAQRQLPGDLDYTTVDTLSKEAREKLNKVK CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC PLTIGQAARIGGVNPADINALLIYLELRQSKHQKGLAVLP CCCCCCHHHCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCC >Mature Secondary Structure TMHNSVEFQDAFDVIVVGAGHSGCEAALATARLGCRTLLLTLNLDKIAWQPCNPAVGGP CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEEEEHHHHCCCCCCCCCCCC AKSQLTHEVDALGGEIGKMADRTYLQKRILNSSRGPAVWALRAQTDKREYAAIMKNIVEN HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCC QENLSIRESMVTDLVLGANDEVIGVETYFGVAFQCKAVILTTGTFLGGKIWVGNKSMPAG CCCCHHHHHHHHHHHCCCCCCEEEEEHHHCEEEEEEEEEEEECCEECCEEEECCCCCCCC RAGEFAAEGLTETLNRLGFETGRLKTGTPARVDKRSVDYSKMQLQPGDAEVRWFSFDPDV CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHEEECCCCCEEEEEECCCCC WVEREQLPCHMTRTTPETHRLIRENLHLSPVYGGWVEAKGPRYCPSIEDKIVRFVDKESH EEECCCCCEEEECCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCC QIFIEPEGRDIPELYIQGFSTGLPENLQLQMLRSLPGLENCVMLRPAYAVEYDYLPATQC EEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEECCCCEEEECCCCCHHH YPTLMTKKIAGLFCAGQVNGTTGYEEAAAQGIVAGINAARFVRDEEMIVFPREHSYLGTL HHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCHHHHH VDDLCTKDLREPYRMLTSRSEYRLLLRSDNADQRLTPLGREIGLIDDRRWQMFTRKQEQI HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH TGEKERLYATRVKENDDVGKAIASNTQQAIKGSITLADLLRRPGFHYVDLDRYGLGNPEL CCCHHHEEHHHCCCCCCHHHHHHHCHHHHHHCCCHHHHHHHCCCCCEEECCCCCCCCCCC TPAEKEGAEIDIKYSGYLARQQSQIEQIARQAQRQLPGDLDYTTVDTLSKEAREKLNKVK CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC PLTIGQAARIGGVNPADINALLIYLELRQSKHQKGLAVLP CCCCCCHHHCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA