| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231046
Identifier: 17231046
GI number: 17231046
Start: 4284082
End: 4284684
Strand: Direct
Name: 17231046
Synonym: alr3554
Alternate gene names: NA
Gene position: 4284082-4284684 (Clockwise)
Preceding gene: 17231045
Following gene: 17231053
Centisome position: 66.8
GC content: 41.63
Gene sequence:
>603_bases ATGAAGCGATCACTTACATTGGGTCAGAACCCATCGCACCTAGTCAAAATCACGATGATAGTTTTATTGTCTCTTGGCAG CGTTGGTGTTGTTGGGGGAAGTTTCTTTATAAGAAAAGCTTTTATCACTACTAGCCAGTCGGAAATAGTCACAGATACAT CACGCTACAAAGAAATACGTCATCAACTTTGGTCTAGTCAGGACGACATTAAACACTTTCCCTCAGAAATACCGGCTGGA GTCAAAAATGAGCGCCTAGCCTATGCTCCAGGAAGTTCACAAACTGGTAGCTACTTCCAAGTAAGGCTGAAAAAGTCACC AGAACAGATTCAACAGTTACTCGACCAGTACCGCAAACTGGCTAAACATCAATATAGAGGTGGTGACACAAACATTCACG CCAATTTACCCAATGGTGTACCAACTACGTTTTTCTATACCAGTGAATCTGCTGCCGAGTCTTTCCCACCTTCCTATGAA ATACTTGTTTTAAATGCAAAGGATAAAGGTAGGCCTGGTTTTAAGTGGAATCACGGTGATAGCTATGGCGTGGCTATTGA TAGTTCTGCTTCAGAAATTATTTATTGGGCTGAAAAATGGTAA
Upstream 100 bases:
>100_bases AAAAAGTTTTTATCAAAATATCTGCGATCGCCTCCGAAATATTACGAATATAGTTTAGTAGTTGGGTATATAGCTATAGA AGTTAGACTCACCCAACTCT
Downstream 100 bases:
>100_bases TTGGTAATTTAATTTCTCCATTGGCTAATCATGGAAATTATTTGGGTTTAAATCAACAGGAAAAACAAAAAATTCTTTGT TTGCTTCAATTAGTGTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MKRSLTLGQNPSHLVKITMIVLLSLGSVGVVGGSFFIRKAFITTSQSEIVTDTSRYKEIRHQLWSSQDDIKHFPSEIPAG VKNERLAYAPGSSQTGSYFQVRLKKSPEQIQQLLDQYRKLAKHQYRGGDTNIHANLPNGVPTTFFYTSESAAESFPPSYE ILVLNAKDKGRPGFKWNHGDSYGVAIDSSASEIIYWAEKW
Sequences:
>Translated_200_residues MKRSLTLGQNPSHLVKITMIVLLSLGSVGVVGGSFFIRKAFITTSQSEIVTDTSRYKEIRHQLWSSQDDIKHFPSEIPAG VKNERLAYAPGSSQTGSYFQVRLKKSPEQIQQLLDQYRKLAKHQYRGGDTNIHANLPNGVPTTFFYTSESAAESFPPSYE ILVLNAKDKGRPGFKWNHGDSYGVAIDSSASEIIYWAEKW >Mature_200_residues MKRSLTLGQNPSHLVKITMIVLLSLGSVGVVGGSFFIRKAFITTSQSEIVTDTSRYKEIRHQLWSSQDDIKHFPSEIPAG VKNERLAYAPGSSQTGSYFQVRLKKSPEQIQQLLDQYRKLAKHQYRGGDTNIHANLPNGVPTTFFYTSESAAESFPPSYE ILVLNAKDKGRPGFKWNHGDSYGVAIDSSASEIIYWAEKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22429; Mature: 22429
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSLTLGQNPSHLVKITMIVLLSLGSVGVVGGSFFIRKAFITTSQSEIVTDTSRYKEIR CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHH HQLWSSQDDIKHFPSEIPAGVKNERLAYAPGSSQTGSYFQVRLKKSPEQIQQLLDQYRKL HHHCCCCCHHHHCHHHCCCCCCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH AKHQYRGGDTNIHANLPNGVPTTFFYTSESAAESFPPSYEILVLNAKDKGRPGFKWNHGD HHHHCCCCCCEEEEECCCCCCCEEEEECCHHHHHCCCCEEEEEEECCCCCCCCCEECCCC SYGVAIDSSASEIIYWAEKW CEEEEEECCCCEEEEEEECC >Mature Secondary Structure MKRSLTLGQNPSHLVKITMIVLLSLGSVGVVGGSFFIRKAFITTSQSEIVTDTSRYKEIR CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHH HQLWSSQDDIKHFPSEIPAGVKNERLAYAPGSSQTGSYFQVRLKKSPEQIQQLLDQYRKL HHHCCCCCHHHHCHHHCCCCCCCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH AKHQYRGGDTNIHANLPNGVPTTFFYTSESAAESFPPSYEILVLNAKDKGRPGFKWNHGD HHHHCCCCCCEEEEECCCCCCCEEEEECCHHHHHCCCCEEEEEEECCCCCCCCCEECCCC SYGVAIDSSASEIIYWAEKW CEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA