Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17230974

Identifier: 17230974

GI number: 17230974

Start: 4199693

End: 4200025

Strand: Direct

Name: 17230974

Synonym: alr3482

Alternate gene names: NA

Gene position: 4199693-4200025 (Clockwise)

Preceding gene: 17230973

Following gene: 17230975

Centisome position: 65.48

GC content: 47.75

Gene sequence:

>333_bases
ATGAATCCTCATCCACTCAAGCAGCGAGAGCAAGATTTGATGCAACTGTACATTTATTGTCAGTTGGGTATGACTCCCAA
GCAGTTTTATACCAAGTGGCAGGTGAACCACGAAGAAATGGCGCAGATTTGCTCTCGCTCCCTTTCCACCGTGCGACGCT
GGTTTGCTAGAGGTAAAAACTACCGCCGCCCCATGCCAGCCGATTTACGCCACTTGGCACTGATGAACTTTCTACTGGAA
CACTTTGAGGAGATTCCCCAAGAACTGTTGCAGAACCTGTGTTTCCCAGACGAGAGTAGGGACGGGTTCATAGATATGTT
TAAGGATAAATGA

Upstream 100 bases:

>100_bases
ACCTGATTTGGTTAAGCAAAAATTGCCCCAGTGCAGCTTGGACATCTGCGGATATTGCTTGGGAAGAAGATTTAGAACCA
ATCAGTGAGGAGGCATACGA

Downstream 100 bases:

>100_bases
GGGTATTTGTCAACCTGCCCCTACTGCATTTAATTGCAATATCAAAATGATATTTCTTGCCAGCCACCTTCACAGTAGGC
TGGCTTTTGTCTTGGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MNPHPLKQREQDLMQLYIYCQLGMTPKQFYTKWQVNHEEMAQICSRSLSTVRRWFARGKNYRRPMPADLRHLALMNFLLE
HFEEIPQELLQNLCFPDESRDGFIDMFKDK

Sequences:

>Translated_110_residues
MNPHPLKQREQDLMQLYIYCQLGMTPKQFYTKWQVNHEEMAQICSRSLSTVRRWFARGKNYRRPMPADLRHLALMNFLLE
HFEEIPQELLQNLCFPDESRDGFIDMFKDK
>Mature_110_residues
MNPHPLKQREQDLMQLYIYCQLGMTPKQFYTKWQVNHEEMAQICSRSLSTVRRWFARGKNYRRPMPADLRHLALMNFLLE
HFEEIPQELLQNLCFPDESRDGFIDMFKDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13381; Mature: 13381

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPHPLKQREQDLMQLYIYCQLGMTPKQFYTKWQVNHEEMAQICSRSLSTVRRWFARGKN
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
YRRPMPADLRHLALMNFLLEHFEEIPQELLQNLCFPDESRDGFIDMFKDK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MNPHPLKQREQDLMQLYIYCQLGMTPKQFYTKWQVNHEEMAQICSRSLSTVRRWFARGKN
CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
YRRPMPADLRHLALMNFLLEHFEEIPQELLQNLCFPDESRDGFIDMFKDK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA