Click here to switch to the map view.

The map label for this gene is 17230964

Identifier: 17230964

GI number: 17230964

Start: 4189385

End: 4191058

Strand: Direct

Name: 17230964

Synonym: alr3472

Alternate gene names: NA

Gene position: 4189385-4191058 (Clockwise)

Preceding gene: 17230963

Following gene: 17230965

Centisome position: 65.32

GC content: 33.63

Gene sequence:

>1674_bases
ATGTCTGAAATGAAATTTAAGCAAGTTGCTAAACAAGTAGAAGATGTATGTTCTGAAAGTTTGAGAATATTATCTTCATC
TACCGATAGTGAGATAGATGTATTTGCAAGAGATTTTGAAATTTTCATTCATGAATATCAACAAAAAGCACAATTAACTA
TTGCCTTTGTTGGTCAATATAATGCGGGTAAGTCTACTTTGATTAAAGCTCTTACGGGCGATACATCTGTCCGAATCAGT
GCTGAAATTTGTACAGATAGGATTACTGAATATCTCTGGAAAGAAGTTATTCTAATTGATACCCCAGGAATTTATGCAGG
TAGAACAGATCACGATCAAATCACTCTAGAACAAATTTCAAAAAGTGATTTACTCATCTTTGTTGTTCCCAACGAATTAT
TTAACCCTCAAGGCGGAGATTTTTTTAAAAGAGTTGCCAATGAAATGCAGCGAGTTGGTCAAATGCTCTTAGTAGTTAAT
AAAATGAGTCGTGAACGCGGTAAGCCAGAAGATTTGCTTAAAAGCCTTTTGGAAGTTGTAGAGCCTCATCACCCTAATGA
TTTTCATACTTGTTTTATTGATGCTGATTCTTATTTTAATACTCAGTGTGAAAAAGATGAAGATGAAAAAGAATTTTTAC
TCGAAGAAGCTAATTTTGATGCTTTCCTGACATCGTTACATAAATTAATCGATAAGAATAAATTCTATGCAAGACTGTTA
ACACCTCTCAACCGTGCCTTAGATATATTAGAACGGTCTTACAATATTTTGAGTACAGATAATAAATCCGCTAGAGATTT
CTTAGAACTACTCCATCGGAAAATGTTACTTATTAAGACATCTCAAATAAGATTTAGAAATTGTTATATAGCTGAATTTA
ACAATCTTGAACACGGAATATTAATGATTGGCGAAGGTGTTGCTAGTAAAGTTGACGGGAGACATAGCGAAAAAGATATT
AACTTGACAATTAAAAAAGCCGAGAAAGAAATAGAATCAACTACAAAGCAAACAATAGAGAAAATACAGTTGGGCTTGGA
AGAGGAATTAAGTAAACTTCAAATTCAACTCGAACAATTATTACAATCAAGGTTGGGTCGCTCTTTAGTCGAAGAAGTGC
AAGTTTCATCAACAGGTAAAAAACAAGTTGATTATGAAGAAGTTGAGAAAACTCCAGAAATACCATCCTTTTTAAGAAAA
AGTCCTGAAACTGTACGGGCTATAGGAAATTTTGCGTCGGCAGTTTCTAGAGACCTAGTTTATAACGTCGGTAAATTTTT
TGGTGTAAAATTTCGTCCTTGGGGAGCAGTGAACGGGGCTAAATTCATCAGAGGTTTAGGGCCTATTATTGGAGGTGTTG
GTCTAATTCTAGAAATTTTTCTTAATGCTAAACAGGAACAGGATGAAGCAGAATATGAGCAGAAACTCCGGGAAGCAAGA
TCAGATTTACGCCAGAGTTTTCGACAATTAGCTTCAGAAATTAGAAGTGAATATGAAGAGAATATTAAAAGTGAGATTAT
TTCTGGCTTTTATGAATCTGAACTTCAAGATGTTGAACGTCAGCGAGATGAATTGCGAAATGATGAAGGTTCAAAAATTG
AAATAGTTAATCGAATCAAACATATAATCCAAAAAATTAAGAAGCAAATAGTCACAATAGAAAATAATGCTTAA

Upstream 100 bases:

>100_bases
TCAGTTATAGCTGATGAATTATTGTAGTTATTTGTCTTGTCTTTAAATCACACTTAAGTGTTTGCATATTTTTTTTAGAA
AGCAGTAGAGGTAGTGAGAA

Downstream 100 bases:

>100_bases
TTAAAGTTATATAGTGGTTTGCTGAATGCGATAAGACTCTATACTGGCATAGTTTGTCAGTTCAATGGGGAGGCGATCGC
CCATTAGTATACAGTGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: GTPase Domain-Containing Protein

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MSEMKFKQVAKQVEDVCSESLRILSSSTDSEIDVFARDFEIFIHEYQQKAQLTIAFVGQYNAGKSTLIKALTGDTSVRIS
AEICTDRITEYLWKEVILIDTPGIYAGRTDHDQITLEQISKSDLLIFVVPNELFNPQGGDFFKRVANEMQRVGQMLLVVN
KMSRERGKPEDLLKSLLEVVEPHHPNDFHTCFIDADSYFNTQCEKDEDEKEFLLEEANFDAFLTSLHKLIDKNKFYARLL
TPLNRALDILERSYNILSTDNKSARDFLELLHRKMLLIKTSQIRFRNCYIAEFNNLEHGILMIGEGVASKVDGRHSEKDI
NLTIKKAEKEIESTTKQTIEKIQLGLEEELSKLQIQLEQLLQSRLGRSLVEEVQVSSTGKKQVDYEEVEKTPEIPSFLRK
SPETVRAIGNFASAVSRDLVYNVGKFFGVKFRPWGAVNGAKFIRGLGPIIGGVGLILEIFLNAKQEQDEAEYEQKLREAR
SDLRQSFRQLASEIRSEYEENIKSEIISGFYESELQDVERQRDELRNDEGSKIEIVNRIKHIIQKIKKQIVTIENNA

Sequences:

>Translated_557_residues
MSEMKFKQVAKQVEDVCSESLRILSSSTDSEIDVFARDFEIFIHEYQQKAQLTIAFVGQYNAGKSTLIKALTGDTSVRIS
AEICTDRITEYLWKEVILIDTPGIYAGRTDHDQITLEQISKSDLLIFVVPNELFNPQGGDFFKRVANEMQRVGQMLLVVN
KMSRERGKPEDLLKSLLEVVEPHHPNDFHTCFIDADSYFNTQCEKDEDEKEFLLEEANFDAFLTSLHKLIDKNKFYARLL
TPLNRALDILERSYNILSTDNKSARDFLELLHRKMLLIKTSQIRFRNCYIAEFNNLEHGILMIGEGVASKVDGRHSEKDI
NLTIKKAEKEIESTTKQTIEKIQLGLEEELSKLQIQLEQLLQSRLGRSLVEEVQVSSTGKKQVDYEEVEKTPEIPSFLRK
SPETVRAIGNFASAVSRDLVYNVGKFFGVKFRPWGAVNGAKFIRGLGPIIGGVGLILEIFLNAKQEQDEAEYEQKLREAR
SDLRQSFRQLASEIRSEYEENIKSEIISGFYESELQDVERQRDELRNDEGSKIEIVNRIKHIIQKIKKQIVTIENNA
>Mature_556_residues
SEMKFKQVAKQVEDVCSESLRILSSSTDSEIDVFARDFEIFIHEYQQKAQLTIAFVGQYNAGKSTLIKALTGDTSVRISA
EICTDRITEYLWKEVILIDTPGIYAGRTDHDQITLEQISKSDLLIFVVPNELFNPQGGDFFKRVANEMQRVGQMLLVVNK
MSRERGKPEDLLKSLLEVVEPHHPNDFHTCFIDADSYFNTQCEKDEDEKEFLLEEANFDAFLTSLHKLIDKNKFYARLLT
PLNRALDILERSYNILSTDNKSARDFLELLHRKMLLIKTSQIRFRNCYIAEFNNLEHGILMIGEGVASKVDGRHSEKDIN
LTIKKAEKEIESTTKQTIEKIQLGLEEELSKLQIQLEQLLQSRLGRSLVEEVQVSSTGKKQVDYEEVEKTPEIPSFLRKS
PETVRAIGNFASAVSRDLVYNVGKFFGVKFRPWGAVNGAKFIRGLGPIIGGVGLILEIFLNAKQEQDEAEYEQKLREARS
DLRQSFRQLASEIRSEYEENIKSEIISGFYESELQDVERQRDELRNDEGSKIEIVNRIKHIIQKIKKQIVTIENNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63962; Mature: 63830

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEMKFKQVAKQVEDVCSESLRILSSSTDSEIDVFARDFEIFIHEYQQKAQLTIAFVGQY
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECC
NAGKSTLIKALTGDTSVRISAEICTDRITEYLWKEVILIDTPGIYAGRTDHDQITLEQIS
CCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCHHHHHCC
KSDLLIFVVPNELFNPQGGDFFKRVANEMQRVGQMLLVVNKMSRERGKPEDLLKSLLEVV
CCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EPHHPNDFHTCFIDADSYFNTQCEKDEDEKEFLLEEANFDAFLTSLHKLIDKNKFYARLL
CCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHH
TPLNRALDILERSYNILSTDNKSARDFLELLHRKMLLIKTSQIRFRNCYIAEFNNLEHGI
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCE
LMIGEGVASKVDGRHSEKDINLTIKKAEKEIESTTKQTIEKIQLGLEEELSKLQIQLEQL
EEECCCHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LQSRLGRSLVEEVQVSSTGKKQVDYEEVEKTPEIPSFLRKSPETVRAIGNFASAVSRDLV
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH
YNVGKFFGVKFRPWGAVNGAKFIRGLGPIIGGVGLILEIFLNAKQEQDEAEYEQKLREAR
HHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SDLRQSFRQLASEIRSEYEENIKSEIISGFYESELQDVERQRDELRNDEGSKIEIVNRIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
HIIQKIKKQIVTIENNA
HHHHHHHHHHEECCCCC
>Mature Secondary Structure 
SEMKFKQVAKQVEDVCSESLRILSSSTDSEIDVFARDFEIFIHEYQQKAQLTIAFVGQY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECC
NAGKSTLIKALTGDTSVRISAEICTDRITEYLWKEVILIDTPGIYAGRTDHDQITLEQIS
CCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCHHHHHCC
KSDLLIFVVPNELFNPQGGDFFKRVANEMQRVGQMLLVVNKMSRERGKPEDLLKSLLEVV
CCCEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EPHHPNDFHTCFIDADSYFNTQCEKDEDEKEFLLEEANFDAFLTSLHKLIDKNKFYARLL
CCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHH
TPLNRALDILERSYNILSTDNKSARDFLELLHRKMLLIKTSQIRFRNCYIAEFNNLEHGI
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCE
LMIGEGVASKVDGRHSEKDINLTIKKAEKEIESTTKQTIEKIQLGLEEELSKLQIQLEQL
EEECCCHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LQSRLGRSLVEEVQVSSTGKKQVDYEEVEKTPEIPSFLRKSPETVRAIGNFASAVSRDLV
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH
YNVGKFFGVKFRPWGAVNGAKFIRGLGPIIGGVGLILEIFLNAKQEQDEAEYEQKLREAR
HHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
SDLRQSFRQLASEIRSEYEENIKSEIISGFYESELQDVERQRDELRNDEGSKIEIVNRIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
HIIQKIKKQIVTIENNA
HHHHHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA