| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230963
Identifier: 17230963
GI number: 17230963
Start: 4187146
End: 4189311
Strand: Direct
Name: 17230963
Synonym: alr3471
Alternate gene names: NA
Gene position: 4187146-4189311 (Clockwise)
Preceding gene: 17230961
Following gene: 17230964
Centisome position: 65.28
GC content: 33.7
Gene sequence:
>2166_bases ATGATTCCACAAACTCTTGAAGAAGTCGTCTCAGATATTCTCAATCAATTTTTTCAGAACAAAGGTATAGGTGCTACTGC TACTTCTAGGAACACGTTACTTAAAATTATTTTAGAGTCTGCTGAAATTCCAGAGCCAGAAAGTACAACAGCACTCATTT TAGACGAAGTTTCTAGGTTAAAAACAACATCATGTAAAAAAATTAAGATACTTGCAAAGCAGAAAAATACTTTTGATGTT GCTTGGTGTCGAGCATTTGATATCAAATCTCAGGCTGAACCTATAATAACTGAGCCAGAATTAGAAACAGAAAACCATAG CTCAAATCGGATATCTAATGATGAATTTCAGCAGGCTCTGGAAGAATCTACGAAGACTGCTAAGAATGCTTATCAAAAAA CTTTCAATTACTATAAAGAAATCGAGGCAATTTTAAACAATCTTAACCTTGATTTAGATAAAAGCGTATTTCATTTATTA AAACAAAAAGATGCTAATAACTTCGACTTTGCACAGGTTTTGAAAAAAATAGCAGGTGAGATTGAAAGCCATGCTAGTGA AGGGCTTCAAGAACTAAAGAAATCCTTAGAAGCAAAAAGGCAACATTTAGCAGATTTTACGGTTGTTTTATTTGGTAGAA CTAAAGCTGGAAAAAGTACTATTCGTGAAGCTTTAACCCGTGGCGATGGCAGTACAATTGGCACAGGTTCACAACGAACA ACTAGAGATGTCAGAGAATATAAATGGAAAGGATTACGCTTAATAGATACACCAGGCATTGAAGCTTATCAAGGAGACGA AGATAAACAAAAAGCTGTAGAAATCGTACATGAATCTGACATAGTTATCTTTCTTACTAGTGATGACTCTGTTCAGCCCG GTGAATTTAATGCTATGGCTTGGCTGCAAGAAATCAAAAAATACTTTTTTGTAATTCTTAATATTAAGTATGATATTGAT AATCCAAAACGCCTGGAAAGGTTTATTAAAAATCCCGAAAAAATCTTTGATTCACAAAGGTTAGATGAACACAAACGTCA TATTCGTAATTATATTCATCACAGTTTAGGCATGGAAGAAGTAGCAATTATTTGTATTCATGCTTATGCAGCATTTCTAA GCAATCAGCCTCAATATAGTAATGTTGCTAATAAACTTTGGGAATTAAGCCGGATAGAAGAAATTTATAGTTTAATCGTA TCAGAAATCTACGCAAGAGGAAAACAAAGACGCTGGAATACCTTTTTTGATGCAATCATATATTTCCTCGATGTAATCAT AAAGATGTTAGAAAGGCATAAAGAATCTCTAGTGTCTCAGGCAGATTTTATGCAAGATAAGCGATCAGAGATTGAAGGTG TTTTTCAAGAGAGTGTTAAAAACGGAAAAATTAAAATTCAAAGATCATGTAAAAATTCATTTAGCAGAATCAAACAATGG ATTCCTAACTTTGTTGATGAATATCTAGGGAAAGACATTGCTCAGTCTGAGTATCAAAAGCGTATGAATAAAGAAAAACA AAAAATTGAAACTGCTATGGAGAACTTATTTGAAGAGATAGTCCAGGAATTAGTGGCTGCTTTAAAGGAGTTTCAAAGGC AATATCAATATGATATGGGAACTATTAAATTAGAATCTACTGATTTTGGAAACTATCAACAATGGCAAACTGGAAAAATT ATGAAGTGGGTAGGTGTTGGGTTAAGTACAACCTCTGCTGTTGCTTTTGGTATCGGTGCTTTTGCAGCAGCTAATTTTTG GAATCCTGTAGGATGGATAGCTGGTGTGACATCTATCGTCGTTGGAATTGTCAGTTGGTTCTTTGGTGAGCAAGATAAAA AATTATGGCAAAAAGCTAAACAAGAAGCTAAAGAAAATCTTTGGAAGAGCTTGGATCAATCAGAGCAAGAAACTTGCAAA AATTACCAAAAATTACTAGATACAAATATTGCTGTTAGGGCTAAAACTGAAGTGCTGGAACAGGTGGATATTTATATTAA AGGAATTCTAATCATTGTGGATGATATAAAAAAAGCAATTTCACAACTTGAGAAAATCAAAAAAGAAATGAAGCGAGAGT CAGATTATACAGGAGTAAGGGATAGATTGCCAAATCCAAGAAATTTCAAGGGTAATTCGTCAGTTATAGCTGATGAATTA TTGTAG
Upstream 100 bases:
>100_bases ATGAAAATCTAATTGTGTTGTTGGTTTTTAAATGTGAGCTACTAGCAGGAAGTGGGAATACTTATTCATAAGGCTATTTA ATATATTCTCATGGCTCAGT
Downstream 100 bases:
>100_bases TTATTTGTCTTGTCTTTAAATCACACTTAAGTGTTTGCATATTTTTTTTAGAAAGCAGTAGAGGTAGTGAGAAATGTCTG AAATGAAATTTAAGCAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane Associated GTPase
Number of amino acids: Translated: 721; Mature: 721
Protein sequence:
>721_residues MIPQTLEEVVSDILNQFFQNKGIGATATSRNTLLKIILESAEIPEPESTTALILDEVSRLKTTSCKKIKILAKQKNTFDV AWCRAFDIKSQAEPIITEPELETENHSSNRISNDEFQQALEESTKTAKNAYQKTFNYYKEIEAILNNLNLDLDKSVFHLL KQKDANNFDFAQVLKKIAGEIESHASEGLQELKKSLEAKRQHLADFTVVLFGRTKAGKSTIREALTRGDGSTIGTGSQRT TRDVREYKWKGLRLIDTPGIEAYQGDEDKQKAVEIVHESDIVIFLTSDDSVQPGEFNAMAWLQEIKKYFFVILNIKYDID NPKRLERFIKNPEKIFDSQRLDEHKRHIRNYIHHSLGMEEVAIICIHAYAAFLSNQPQYSNVANKLWELSRIEEIYSLIV SEIYARGKQRRWNTFFDAIIYFLDVIIKMLERHKESLVSQADFMQDKRSEIEGVFQESVKNGKIKIQRSCKNSFSRIKQW IPNFVDEYLGKDIAQSEYQKRMNKEKQKIETAMENLFEEIVQELVAALKEFQRQYQYDMGTIKLESTDFGNYQQWQTGKI MKWVGVGLSTTSAVAFGIGAFAAANFWNPVGWIAGVTSIVVGIVSWFFGEQDKKLWQKAKQEAKENLWKSLDQSEQETCK NYQKLLDTNIAVRAKTEVLEQVDIYIKGILIIVDDIKKAISQLEKIKKEMKRESDYTGVRDRLPNPRNFKGNSSVIADEL L
Sequences:
>Translated_721_residues MIPQTLEEVVSDILNQFFQNKGIGATATSRNTLLKIILESAEIPEPESTTALILDEVSRLKTTSCKKIKILAKQKNTFDV AWCRAFDIKSQAEPIITEPELETENHSSNRISNDEFQQALEESTKTAKNAYQKTFNYYKEIEAILNNLNLDLDKSVFHLL KQKDANNFDFAQVLKKIAGEIESHASEGLQELKKSLEAKRQHLADFTVVLFGRTKAGKSTIREALTRGDGSTIGTGSQRT TRDVREYKWKGLRLIDTPGIEAYQGDEDKQKAVEIVHESDIVIFLTSDDSVQPGEFNAMAWLQEIKKYFFVILNIKYDID NPKRLERFIKNPEKIFDSQRLDEHKRHIRNYIHHSLGMEEVAIICIHAYAAFLSNQPQYSNVANKLWELSRIEEIYSLIV SEIYARGKQRRWNTFFDAIIYFLDVIIKMLERHKESLVSQADFMQDKRSEIEGVFQESVKNGKIKIQRSCKNSFSRIKQW IPNFVDEYLGKDIAQSEYQKRMNKEKQKIETAMENLFEEIVQELVAALKEFQRQYQYDMGTIKLESTDFGNYQQWQTGKI MKWVGVGLSTTSAVAFGIGAFAAANFWNPVGWIAGVTSIVVGIVSWFFGEQDKKLWQKAKQEAKENLWKSLDQSEQETCK NYQKLLDTNIAVRAKTEVLEQVDIYIKGILIIVDDIKKAISQLEKIKKEMKRESDYTGVRDRLPNPRNFKGNSSVIADEL L >Mature_721_residues MIPQTLEEVVSDILNQFFQNKGIGATATSRNTLLKIILESAEIPEPESTTALILDEVSRLKTTSCKKIKILAKQKNTFDV AWCRAFDIKSQAEPIITEPELETENHSSNRISNDEFQQALEESTKTAKNAYQKTFNYYKEIEAILNNLNLDLDKSVFHLL KQKDANNFDFAQVLKKIAGEIESHASEGLQELKKSLEAKRQHLADFTVVLFGRTKAGKSTIREALTRGDGSTIGTGSQRT TRDVREYKWKGLRLIDTPGIEAYQGDEDKQKAVEIVHESDIVIFLTSDDSVQPGEFNAMAWLQEIKKYFFVILNIKYDID NPKRLERFIKNPEKIFDSQRLDEHKRHIRNYIHHSLGMEEVAIICIHAYAAFLSNQPQYSNVANKLWELSRIEEIYSLIV SEIYARGKQRRWNTFFDAIIYFLDVIIKMLERHKESLVSQADFMQDKRSEIEGVFQESVKNGKIKIQRSCKNSFSRIKQW IPNFVDEYLGKDIAQSEYQKRMNKEKQKIETAMENLFEEIVQELVAALKEFQRQYQYDMGTIKLESTDFGNYQQWQTGKI MKWVGVGLSTTSAVAFGIGAFAAANFWNPVGWIAGVTSIVVGIVSWFFGEQDKKLWQKAKQEAKENLWKSLDQSEQETCK NYQKLLDTNIAVRAKTEVLEQVDIYIKGILIIVDDIKKAISQLEKIKKEMKRESDYTGVRDRLPNPRNFKGNSSVIADEL L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83061; Mature: 83061
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPQTLEEVVSDILNQFFQNKGIGATATSRNTLLKIILESAEIPEPESTTALILDEVSRL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH KTTSCKKIKILAKQKNTFDVAWCRAFDIKSQAEPIITEPELETENHSSNRISNDEFQQAL HHCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH EESTKTAKNAYQKTFNYYKEIEAILNNLNLDLDKSVFHLLKQKDANNFDFAQVLKKIAGE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IESHASEGLQELKKSLEAKRQHLADFTVVLFGRTKAGKSTIREALTRGDGSTIGTGSQRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHH TRDVREYKWKGLRLIDTPGIEAYQGDEDKQKAVEIVHESDIVIFLTSDDSVQPGEFNAMA HHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH WLQEIKKYFFVILNIKYDIDNPKRLERFIKNPEKIFDSQRLDEHKRHIRNYIHHSLGMEE HHHHHHHHHEEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VAIICIHAYAAFLSNQPQYSNVANKLWELSRIEEIYSLIVSEIYARGKQRRWNTFFDAII HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH YFLDVIIKMLERHKESLVSQADFMQDKRSEIEGVFQESVKNGKIKIQRSCKNSFSRIKQW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH IPNFVDEYLGKDIAQSEYQKRMNKEKQKIETAMENLFEEIVQELVAALKEFQRQYQYDMG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TIKLESTDFGNYQQWQTGKIMKWVGVGLSTTSAVAFGIGAFAAANFWNPVGWIAGVTSIV EEEEECCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VGIVSWFFGEQDKKLWQKAKQEAKENLWKSLDQSEQETCKNYQKLLDTNIAVRAKTEVLE HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH QVDIYIKGILIIVDDIKKAISQLEKIKKEMKRESDYTGVRDRLPNPRNFKGNSSVIADEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHC L C >Mature Secondary Structure MIPQTLEEVVSDILNQFFQNKGIGATATSRNTLLKIILESAEIPEPESTTALILDEVSRL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH KTTSCKKIKILAKQKNTFDVAWCRAFDIKSQAEPIITEPELETENHSSNRISNDEFQQAL HHCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH EESTKTAKNAYQKTFNYYKEIEAILNNLNLDLDKSVFHLLKQKDANNFDFAQVLKKIAGE HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IESHASEGLQELKKSLEAKRQHLADFTVVLFGRTKAGKSTIREALTRGDGSTIGTGSQRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHH TRDVREYKWKGLRLIDTPGIEAYQGDEDKQKAVEIVHESDIVIFLTSDDSVQPGEFNAMA HHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHH WLQEIKKYFFVILNIKYDIDNPKRLERFIKNPEKIFDSQRLDEHKRHIRNYIHHSLGMEE HHHHHHHHHEEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VAIICIHAYAAFLSNQPQYSNVANKLWELSRIEEIYSLIVSEIYARGKQRRWNTFFDAII HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH YFLDVIIKMLERHKESLVSQADFMQDKRSEIEGVFQESVKNGKIKIQRSCKNSFSRIKQW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHH IPNFVDEYLGKDIAQSEYQKRMNKEKQKIETAMENLFEEIVQELVAALKEFQRQYQYDMG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TIKLESTDFGNYQQWQTGKIMKWVGVGLSTTSAVAFGIGAFAAANFWNPVGWIAGVTSIV EEEEECCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VGIVSWFFGEQDKKLWQKAKQEAKENLWKSLDQSEQETCKNYQKLLDTNIAVRAKTEVLE HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHH QVDIYIKGILIIVDDIKKAISQLEKIKKEMKRESDYTGVRDRLPNPRNFKGNSSVIADEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA