| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230896
Identifier: 17230896
GI number: 17230896
Start: 4115430
End: 4115780
Strand: Reverse
Name: 17230896
Synonym: all3404
Alternate gene names: NA
Gene position: 4115780-4115430 (Counterclockwise)
Preceding gene: 17230900
Following gene: 17230895
Centisome position: 64.17
GC content: 39.89
Gene sequence:
>351_bases ATGCAGTTAATTTCTGGGTTTATTGACACCTACCTACGCCTAAACGCCCAAGAAACAGAAATTTTCCAGGCTGAAATTGC ACAATTTGAACCAACTCAACAAGAGGTAGTTATGCAGATCGTCACTAGTTGGATGGAGGAAGGAATACAACAAGGGCTGC AACAAGGTCTACAGCAAGGAGAATTGAAAGTAATCCAGCGTCAATTAACAAGACGAATTGGTGATATTACCCCTGAATTA CAAGAGCGAGTGCAGGGATTATCTTTAACTCAGTTAGAAGATTTAGCTGAAGCATTACTAGATTTTTCTACTGAAGCTGA TTTGGTAACTTGGTTGCAACAGCAGCAATAA
Upstream 100 bases:
>100_bases TGCGCTGATGGCTAAAATGAGCATAGCACTACAAGACCGCCCCAGAGTAAAATCTGAGTGTCTGCGTCTTTTAGCTACTT TGCAGTTAGATCCAGCACGA
Downstream 100 bases:
>100_bases GATCGTAGTTTACTATGCGATCGCTCTCTTTATCCATTTGCGCCCTTTGCAGGTTGTTAAAAAAGCGATCGCTAATTTGA CGAGTGAGCGAGATTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MQLISGFIDTYLRLNAQETEIFQAEIAQFEPTQQEVVMQIVTSWMEEGIQQGLQQGLQQGELKVIQRQLTRRIGDITPEL QERVQGLSLTQLEDLAEALLDFSTEADLVTWLQQQQ
Sequences:
>Translated_116_residues MQLISGFIDTYLRLNAQETEIFQAEIAQFEPTQQEVVMQIVTSWMEEGIQQGLQQGLQQGELKVIQRQLTRRIGDITPEL QERVQGLSLTQLEDLAEALLDFSTEADLVTWLQQQQ >Mature_116_residues MQLISGFIDTYLRLNAQETEIFQAEIAQFEPTQQEVVMQIVTSWMEEGIQQGLQQGLQQGELKVIQRQLTRRIGDITPEL QERVQGLSLTQLEDLAEALLDFSTEADLVTWLQQQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13334; Mature: 13334
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLISGFIDTYLRLNAQETEIFQAEIAQFEPTQQEVVMQIVTSWMEEGIQQGLQQGLQQG CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELKVIQRQLTRRIGDITPELQERVQGLSLTQLEDLAEALLDFSTEADLVTWLQQQQ HHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC >Mature Secondary Structure MQLISGFIDTYLRLNAQETEIFQAEIAQFEPTQQEVVMQIVTSWMEEGIQQGLQQGLQQG CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELKVIQRQLTRRIGDITPELQERVQGLSLTQLEDLAEALLDFSTEADLVTWLQQQQ HHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA