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The map label for this gene is srpB [H]

Identifier: 17230888

GI number: 17230888

Start: 4104126

End: 4104446

Strand: Reverse

Name: srpB [H]

Synonym: all3396

Alternate gene names: 17230888

Gene position: 4104446-4104126 (Counterclockwise)

Preceding gene: 17230890

Following gene: 17230884

Centisome position: 63.99

GC content: 39.56

Gene sequence:

>321_bases
ATGTTAGTTAGCTTTGGGTCTGCCATATTTGTTGTTATACCTTTACAAATTATCTCTATACAATCACATCCAGAAGTGGT
TAGCCGAGTAATTCAAGGTATTGCGGCTGGTGTGGGATTTCTCGGTGCTGGTGAAATTGTCCGTGAATCTTCACAACAAT
CACAACGTCTAGAAATTCATGGACTTACCTCGGCTGCGGCTATCTGGGTTTCCTCTGGGTTGGGAATTGCTGCTGGTTGT
GGTTTATGGCAATTAAGTTTAGTAGGAGCCATCATAACTTTTGCGGTTTTAAATATTTTTAAGAGATTAGAAAATAGTTA
A

Upstream 100 bases:

>100_bases
TTTCAAGCTGATCTTTCGGCTTTTCTTAGCTTTACTTATTGGAGCTATTATCGGCATAGAAAGAGAACTACGGCGTAAAC
CAGCAGGCTTGAGAACTCAT

Downstream 100 bases:

>100_bases
TGATTTGAGTGATAAATATATCTTCAGAAGTTGGTCGCAGGGGGAGGAACTTAGAGAAAAATTTTCCTCCAGTCCCCAAT
CCCCAATTCTAAATATCCAA

Product: sulfur-regulated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MLVSFGSAIFVVIPLQIISIQSHPEVVSRVIQGIAAGVGFLGAGEIVRESSQQSQRLEIHGLTSAAAIWVSSGLGIAAGC
GLWQLSLVGAIITFAVLNIFKRLENS

Sequences:

>Translated_106_residues
MLVSFGSAIFVVIPLQIISIQSHPEVVSRVIQGIAAGVGFLGAGEIVRESSQQSQRLEIHGLTSAAAIWVSSGLGIAAGC
GLWQLSLVGAIITFAVLNIFKRLENS
>Mature_106_residues
MLVSFGSAIFVVIPLQIISIQSHPEVVSRVIQGIAAGVGFLGAGEIVRESSQQSQRLEIHGLTSAAAIWVSSGLGIAAGC
GLWQLSLVGAIITFAVLNIFKRLENS

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=106, Percent_Identity=33.0188679245283, Blast_Score=62, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 11073; Mature: 11073

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVSFGSAIFVVIPLQIISIQSHPEVVSRVIQGIAAGVGFLGAGEIVRESSQQSQRLEIH
CEECCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GLTSAAAIWVSSGLGIAAGCGLWQLSLVGAIITFAVLNIFKRLENS
CCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLVSFGSAIFVVIPLQIISIQSHPEVVSRVIQGIAAGVGFLGAGEIVRESSQQSQRLEIH
CEECCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
GLTSAAAIWVSSGLGIAAGCGLWQLSLVGAIITFAVLNIFKRLENS
CCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]