| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17230812
Identifier: 17230812
GI number: 17230812
Start: 4014539
End: 4016308
Strand: Reverse
Name: 17230812
Synonym: all3320
Alternate gene names: NA
Gene position: 4016308-4014539 (Counterclockwise)
Preceding gene: 17230813
Following gene: 17230811
Centisome position: 62.62
GC content: 48.14
Gene sequence:
>1770_bases ATGAACGATCGCATCATCCCCAGAAATTCTCTCTATGATGTCGCTACCTTCAAACTTTTATCTGATGGTAAGGACATCAC CAATGATTACACGGTGCTATCTATAACGGTGAATCAGATTGTCAACCGTGTACCAACGGCGCGAATTATACTGCGTGATG GTGCGGCGGCGGATGAGACTTTTGCAGCTAGTGAGGGGGCTGACTTAGTTCCTGGTCAAGAGGTGGAAATTGCGGCTGGG TATGACGGCTCAGATCAGAAGATTTTTCAAGGATTGATTGTCAAACACGCCTTGAAAGTGACTGCTAATGGTGACTCGAT GCTGATGCTTGATTGTCGGGGTCTGGCTACTAAACTGACTGTTGGTCGTCATAATCGCTATTTTGTGGATACAAAAGATA GTGATGCGATCGCCGAAATTATCGCTCAACACAGTTTATCGGCAGATGTGGCAGCTACCCAGGTGCAGCATCCGGAAATT GTCCAGTATTACGCCACTGATTGGGATTTTATTCTGTCACGGGCGGAAATGAACGGACAGATTGTGGTGGCACAAGACGA AAAAATTAAGGTGAAGGCTCCTAACACAAGCGGCGCTCCCCAGATTACATTAACTTACGGTGTCAATCTCCTAGAGTTGG AAGCGGCGATGGATGCCCGTCACCAATATCAAGCAGTAAAGGCAACCTCTTGGAATTATGCTGATCAGGCCTTAGTTGAA GCTGAAGCCAGCGAACCTACGGTTAATAATCAAGGCAATTTATCAGGACGGCAATTAGCGCAAGTAATCGACTTGAGTGC ATTGGAACTGCGTCACAGTGGTTTGGTGGCTGAACCAGAACTCAAGGCTTGGGCGGATGCTCAACTACTCAAGAGTAGAT TAGCCAAAATTCAGGGACGGGTGAAAACCAAAGGCTACCCTGATGCTAAGGTCGATGTGTTGATTCAGTTGGCGGGAGTA GGCGATCGCTTTAATGGACTCGCCTATGTTTCCGGTATTCGCCATGAAATAGTCGGGGGAGCTTGGGACACTCATATACA GATGGGACTTCCTCCCCAATGGTTTTATCAAGAAGTCGACATTATTGATAAACCTGCTGCGGGGTTACTCCCTGGGGTAA ATGGCTTACAGATTGGGGTGGTGGTGCAGTTGCAAGACGACCCCAACGGCGAAGACCGCATCCTCGTTAAAGTGCCGATT ATCGATGCTCAAGCCGAGGGGATTTGGGCGCGAATTGCCACCCTAGACGCGGGGAATAATCGCGGTTCCTTCTTTCGTCC CGAAGTCGGCGATGAGGTAATACTCGGTTTTCTCAACGATGACCCCCGTGATCCTGTAGTTTTAGGGATGTTGAATAGTA GTGCTAAACCAGCCCCTTTACGCGCTACCGCCGAAAACCATCGCAAAGGGTTTTTTACGCGCTCTCAAATGCAGCTAACT TTTGATGACGACAAGAAAATAATTACCCTACAAACCCCAGGAGGTAATAAAGTCACCATCTCCGACGAAGACAAAGGTAT CACCCTCACCGACCAAAACGGCAACACCTTCGCTATGAGCGATCGCGGTATTGCCATGAATAGCCCCAAAGACATCACCC TAGAAGCCACAGGTAAACTGACCCTCAAAGCCACTCAAGATGTCAGCATTGAGGGCTTGAATGTGAATATCGCAGCCAAC GCCCAATTCAAAGCCCAAGGTAACGCCGGCGCAGAAGTTTCCAGTAGTGCGATCGCTGTTCTAAAAGGTTCATTAGTAAT GATTAATTAA
Upstream 100 bases:
>100_bases CCTATTATTTACAGATTGCCAAGGTCAACGGTTTAATTAACTTCCGCAAACTAGCTACTAATACAGACTTGCGGTTTCCA CCACTGGAAAAAACACAATC
Downstream 100 bases:
>100_bases GGTGTTGACTGCTGCTGAGGTCTGAAGTTTATCCTCCCCACCTCCCCTGCCCTGCTCCCCCTGCCCCTACTCCAAAAGGA ATCTTATGGGAAAACCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Rhs Element Vgr Protein Family Protein; VgrG Protein; Phage Protein D; Phosphoserine Phosphatase SerB; Rhs Family Protein; Phage Protein
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MNDRIIPRNSLYDVATFKLLSDGKDITNDYTVLSITVNQIVNRVPTARIILRDGAAADETFAASEGADLVPGQEVEIAAG YDGSDQKIFQGLIVKHALKVTANGDSMLMLDCRGLATKLTVGRHNRYFVDTKDSDAIAEIIAQHSLSADVAATQVQHPEI VQYYATDWDFILSRAEMNGQIVVAQDEKIKVKAPNTSGAPQITLTYGVNLLELEAAMDARHQYQAVKATSWNYADQALVE AEASEPTVNNQGNLSGRQLAQVIDLSALELRHSGLVAEPELKAWADAQLLKSRLAKIQGRVKTKGYPDAKVDVLIQLAGV GDRFNGLAYVSGIRHEIVGGAWDTHIQMGLPPQWFYQEVDIIDKPAAGLLPGVNGLQIGVVVQLQDDPNGEDRILVKVPI IDAQAEGIWARIATLDAGNNRGSFFRPEVGDEVILGFLNDDPRDPVVLGMLNSSAKPAPLRATAENHRKGFFTRSQMQLT FDDDKKIITLQTPGGNKVTISDEDKGITLTDQNGNTFAMSDRGIAMNSPKDITLEATGKLTLKATQDVSIEGLNVNIAAN AQFKAQGNAGAEVSSSAIAVLKGSLVMIN
Sequences:
>Translated_589_residues MNDRIIPRNSLYDVATFKLLSDGKDITNDYTVLSITVNQIVNRVPTARIILRDGAAADETFAASEGADLVPGQEVEIAAG YDGSDQKIFQGLIVKHALKVTANGDSMLMLDCRGLATKLTVGRHNRYFVDTKDSDAIAEIIAQHSLSADVAATQVQHPEI VQYYATDWDFILSRAEMNGQIVVAQDEKIKVKAPNTSGAPQITLTYGVNLLELEAAMDARHQYQAVKATSWNYADQALVE AEASEPTVNNQGNLSGRQLAQVIDLSALELRHSGLVAEPELKAWADAQLLKSRLAKIQGRVKTKGYPDAKVDVLIQLAGV GDRFNGLAYVSGIRHEIVGGAWDTHIQMGLPPQWFYQEVDIIDKPAAGLLPGVNGLQIGVVVQLQDDPNGEDRILVKVPI IDAQAEGIWARIATLDAGNNRGSFFRPEVGDEVILGFLNDDPRDPVVLGMLNSSAKPAPLRATAENHRKGFFTRSQMQLT FDDDKKIITLQTPGGNKVTISDEDKGITLTDQNGNTFAMSDRGIAMNSPKDITLEATGKLTLKATQDVSIEGLNVNIAAN AQFKAQGNAGAEVSSSAIAVLKGSLVMIN >Mature_589_residues MNDRIIPRNSLYDVATFKLLSDGKDITNDYTVLSITVNQIVNRVPTARIILRDGAAADETFAASEGADLVPGQEVEIAAG YDGSDQKIFQGLIVKHALKVTANGDSMLMLDCRGLATKLTVGRHNRYFVDTKDSDAIAEIIAQHSLSADVAATQVQHPEI VQYYATDWDFILSRAEMNGQIVVAQDEKIKVKAPNTSGAPQITLTYGVNLLELEAAMDARHQYQAVKATSWNYADQALVE AEASEPTVNNQGNLSGRQLAQVIDLSALELRHSGLVAEPELKAWADAQLLKSRLAKIQGRVKTKGYPDAKVDVLIQLAGV GDRFNGLAYVSGIRHEIVGGAWDTHIQMGLPPQWFYQEVDIIDKPAAGLLPGVNGLQIGVVVQLQDDPNGEDRILVKVPI IDAQAEGIWARIATLDAGNNRGSFFRPEVGDEVILGFLNDDPRDPVVLGMLNSSAKPAPLRATAENHRKGFFTRSQMQLT FDDDKKIITLQTPGGNKVTISDEDKGITLTDQNGNTFAMSDRGIAMNSPKDITLEATGKLTLKATQDVSIEGLNVNIAAN AQFKAQGNAGAEVSSSAIAVLKGSLVMIN
Specific function: Unknown
COG id: COG3500
COG function: function code R; Phage protein D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63574; Mature: 63574
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDRIIPRNSLYDVATFKLLSDGKDITNDYTVLSITVNQIVNRVPTARIILRDGAAADET CCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEHHHHHHHCCCEEEEEECCCCCCCC FAASEGADLVPGQEVEIAAGYDGSDQKIFQGLIVKHALKVTANGDSMLMLDCRGLATKLT EECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCEEEEECCCCEEEEE VGRHNRYFVDTKDSDAIAEIIAQHSLSADVAATQVQHPEIVQYYATDWDFILSRAEMNGQ ECCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHCCCCE IVVAQDEKIKVKAPNTSGAPQITLTYGVNLLELEAAMDARHQYQAVKATSWNYADQALVE EEEEECCEEEEECCCCCCCCEEEEEECCEEEEEHHHHHHHHHEEEEEECCCCCCCHHHEE AEASEPTVNNQGNLSGRQLAQVIDLSALELRHSGLVAEPELKAWADAQLLKSRLAKIQGR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHCCC VKTKGYPDAKVDVLIQLAGVGDRFNGLAYVSGIRHEIVGGAWDTHIQMGLPPQWFYQEVD EECCCCCCCCEEEEEEEECCCCCCCCEEEECCHHHHHCCCCCCCEEEECCCHHHHHHHCC IIDKPAAGLLPGVNGLQIGVVVQLQDDPNGEDRILVKVPIIDAQAEGIWARIATLDAGNN CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCC RGSFFRPEVGDEVILGFLNDDPRDPVVLGMLNSSAKPAPLRATAENHRKGFFTRSQMQLT CCCEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEECCCHHCCCCCEEECEEEEE FDDDKKIITLQTPGGNKVTISDEDKGITLTDQNGNTFAMSDRGIAMNSPKDITLEATGKL ECCCCEEEEEECCCCCEEEECCCCCCEEEECCCCCEEEEECCCEEECCCCCEEEEECCEE TLKATQDVSIEGLNVNIAANAQFKAQGNAGAEVSSSAIAVLKGSLVMIN EEEEECCCEEEEEEEEEEECEEEEECCCCCCCCCCCEEEEEECCEEEEC >Mature Secondary Structure MNDRIIPRNSLYDVATFKLLSDGKDITNDYTVLSITVNQIVNRVPTARIILRDGAAADET CCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEHHHHHHHCCCEEEEEECCCCCCCC FAASEGADLVPGQEVEIAAGYDGSDQKIFQGLIVKHALKVTANGDSMLMLDCRGLATKLT EECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHEEEEEEECCCCEEEEECCCCEEEEE VGRHNRYFVDTKDSDAIAEIIAQHSLSADVAATQVQHPEIVQYYATDWDFILSRAEMNGQ ECCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHCCCCE IVVAQDEKIKVKAPNTSGAPQITLTYGVNLLELEAAMDARHQYQAVKATSWNYADQALVE EEEEECCEEEEECCCCCCCCEEEEEECCEEEEEHHHHHHHHHEEEEEECCCCCCCHHHEE AEASEPTVNNQGNLSGRQLAQVIDLSALELRHSGLVAEPELKAWADAQLLKSRLAKIQGR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHCCC VKTKGYPDAKVDVLIQLAGVGDRFNGLAYVSGIRHEIVGGAWDTHIQMGLPPQWFYQEVD EECCCCCCCCEEEEEEEECCCCCCCCEEEECCHHHHHCCCCCCCEEEECCCHHHHHHHCC IIDKPAAGLLPGVNGLQIGVVVQLQDDPNGEDRILVKVPIIDAQAEGIWARIATLDAGNN CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCEEEEEEEEECCCC RGSFFRPEVGDEVILGFLNDDPRDPVVLGMLNSSAKPAPLRATAENHRKGFFTRSQMQLT CCCEECCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEECCCHHCCCCCEEECEEEEE FDDDKKIITLQTPGGNKVTISDEDKGITLTDQNGNTFAMSDRGIAMNSPKDITLEATGKL ECCCCEEEEEECCCCCEEEECCCCCCEEEECCCCCEEEEECCCEEECCCCCEEEEECCEE TLKATQDVSIEGLNVNIAANAQFKAQGNAGAEVSSSAIAVLKGSLVMIN EEEEECCCEEEEEEEEEEECEEEEECCCCCCCCCCCEEEEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA