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The map label for this gene is yjcF [C]

Identifier: 17230797

GI number: 17230797

Start: 3987372

End: 3988862

Strand: Reverse

Name: yjcF [C]

Synonym: all3305

Alternate gene names: 17230797

Gene position: 3988862-3987372 (Counterclockwise)

Preceding gene: 17230798

Following gene: 17230790

Centisome position: 62.19

GC content: 40.91

Gene sequence:

>1491_bases
GTGGTAAGGAATTATACGATTATGCCTGCTAATAAGACAGACAAATTATGGCGTTGGTTGATTGGCATAACCGTGATATT
TGCCGTTACTATAGCTGTGATTTTATTTGCATCTTCCAACCCTCAAGGGTTGACCATACAACAAAAATTACAATCTAGAA
ATCAAGCACTAACAATTACTGCCATTATTTTTTTGGGATTGGGGGTAATGATTAATGCTTACTACGCAGCCAAGCGCGTA
GATGTCATTAGTAAAAGTGCTTTGGCTGCCGAAAAAAACTTAGAAATTAGCATTCAAAATGCCAAACTATCTGAAGATAG
ATTAATTTCGGAACGTCTGATGACTGCGGTTACCCAACTTGGACATGACAAAATTGAAACCCGCACAGGGGCAATTTATG
TGTTAGAAAAAGTTGCCCAAGATTTTCCCCAAGAACACTGGACAGTTATCGAAATCCTGACAGCTTTTATTCGAGAGAAT
GCTGCTGTTCGAGAAGTAGAAGAGCAGAAGGAAGATGAATCACAGCCAACATCCCTGAGTAGGTATAAGCAAGGTGAGCG
TCGAACACCACAGTTGCCCTTGAATGTTCATGAGGAATCACCAAAAATTCGTAGGGATATTCAAGTAGCTTTGACGGTTG
TTGGTAGACGTAACTACTTACAAGAGGAGGCAGATAAACGACTTGATTTGCGTAATATTAATCTCAGGCGAGTAGAACTA
TTGGGAGCAAATTTACAACGAGCAGATTTGCGGGGTTGTGATTTTCGCGGAGCAGATTTGCGGGGTTGTGATTTCAGTGG
AGCAAATCTTGAGGGTGCAGAATTAGCTGGCTCTATTCTGTTTGAGGCTAATTTCTTGAAAGCAAATTTGCAAGGAGCAA
ATATACAAGGCGCAAATTTAAATCGTGCAGAACTTGGTGGTGCAAATTTACGCAGTGCTAATCTTATGGGTGCAAGTCTG
CGTGCAGCGAATTTGCCTGGTGCTAATCTTTATAAAGTCAATTTGCAACACGCAATATTGAAATTGGCTAATCTTTGCGG
TGCAAAGCTGTTCTTAGCTAACCTACAAGGAGCAAAACTTGGTAAAGCTAATCTATCTCTTTGTGGTCTCATTGGCGCAA
ATTTACAAGGTGCTAATCTCAACGGGGCGAATCTTGCTGAAGCGAATTTAAATGCAGCCAAGTTACAACAAGCGGAGATG
TTATTTGTTGACTTCACGGAGGCCAGTTTGACGGAAGCAGACTTGTGTAAAGCCAATTTGATGGGAGCAAATTTACAAAG
AGCCAGCCTCTATCAAGCAAATCTTTTTCAGTGCAATCTCGTAGGGGCTAACCTATCTGATACTAACTTTTGTGATGTTA
AATTAGCCGGAGCAATTCTCACAGGAGTCAAAAATTTAAAACCTCAACAAGTTAGCATTGCCATAGGCGATCGCACGACT
CGCTTACCTGATAATGTGGAAATACCAATACATTGGCGACAATCTAGTTAA

Upstream 100 bases:

>100_bases
TCTAGTTATCAACGCATCAATTAATGCAATCAGTACCATATTTAAATTTAGATTTAAATAGTGTATTATTTTCTGGAAAA
CACATGAGAATTAATTGTGT

Downstream 100 bases:

>100_bases
CTATAGAGCCAGGTATTTAAAACCAAGGACTTTGTTCTTTATCCCAACACTGATTTTCATTCCAAGTTCTACCTGTATAT
TCACATTCATACTGGCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MVRNYTIMPANKTDKLWRWLIGITVIFAVTIAVILFASSNPQGLTIQQKLQSRNQALTITAIIFLGLGVMINAYYAAKRV
DVISKSALAAEKNLEISIQNAKLSEDRLISERLMTAVTQLGHDKIETRTGAIYVLEKVAQDFPQEHWTVIEILTAFIREN
AAVREVEEQKEDESQPTSLSRYKQGERRTPQLPLNVHEESPKIRRDIQVALTVVGRRNYLQEEADKRLDLRNINLRRVEL
LGANLQRADLRGCDFRGADLRGCDFSGANLEGAELAGSILFEANFLKANLQGANIQGANLNRAELGGANLRSANLMGASL
RAANLPGANLYKVNLQHAILKLANLCGAKLFLANLQGAKLGKANLSLCGLIGANLQGANLNGANLAEANLNAAKLQQAEM
LFVDFTEASLTEADLCKANLMGANLQRASLYQANLFQCNLVGANLSDTNFCDVKLAGAILTGVKNLKPQQVSIAIGDRTT
RLPDNVEIPIHWRQSS

Sequences:

>Translated_496_residues
MVRNYTIMPANKTDKLWRWLIGITVIFAVTIAVILFASSNPQGLTIQQKLQSRNQALTITAIIFLGLGVMINAYYAAKRV
DVISKSALAAEKNLEISIQNAKLSEDRLISERLMTAVTQLGHDKIETRTGAIYVLEKVAQDFPQEHWTVIEILTAFIREN
AAVREVEEQKEDESQPTSLSRYKQGERRTPQLPLNVHEESPKIRRDIQVALTVVGRRNYLQEEADKRLDLRNINLRRVEL
LGANLQRADLRGCDFRGADLRGCDFSGANLEGAELAGSILFEANFLKANLQGANIQGANLNRAELGGANLRSANLMGASL
RAANLPGANLYKVNLQHAILKLANLCGAKLFLANLQGAKLGKANLSLCGLIGANLQGANLNGANLAEANLNAAKLQQAEM
LFVDFTEASLTEADLCKANLMGANLQRASLYQANLFQCNLVGANLSDTNFCDVKLAGAILTGVKNLKPQQVSIAIGDRTT
RLPDNVEIPIHWRQSS
>Mature_496_residues
MVRNYTIMPANKTDKLWRWLIGITVIFAVTIAVILFASSNPQGLTIQQKLQSRNQALTITAIIFLGLGVMINAYYAAKRV
DVISKSALAAEKNLEISIQNAKLSEDRLISERLMTAVTQLGHDKIETRTGAIYVLEKVAQDFPQEHWTVIEILTAFIREN
AAVREVEEQKEDESQPTSLSRYKQGERRTPQLPLNVHEESPKIRRDIQVALTVVGRRNYLQEEADKRLDLRNINLRRVEL
LGANLQRADLRGCDFRGADLRGCDFSGANLEGAELAGSILFEANFLKANLQGANIQGANLNRAELGGANLRSANLMGASL
RAANLPGANLYKVNLQHAILKLANLCGAKLFLANLQGAKLGKANLSLCGLIGANLQGANLNGANLAEANLNAAKLQQAEM
LFVDFTEASLTEADLCKANLMGANLQRASLYQANLFQCNLVGANLSDTNFCDVKLAGAILTGVKNLKPQQVSIAIGDRTT
RLPDNVEIPIHWRQSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=185, Percent_Identity=34.0540540540541, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI221377802, Length=159, Percent_Identity=37.1069182389937, Blast_Score=85, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 54304; Mature: 54304

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRNYTIMPANKTDKLWRWLIGITVIFAVTIAVILFASSNPQGLTIQQKLQSRNQALTIT
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHCCCCEEEHH
AIIFLGLGVMINAYYAAKRVDVISKSALAAEKNLEISIQNAKLSEDRLISERLMTAVTQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
GHDKIETRTGAIYVLEKVAQDFPQEHWTVIEILTAFIRENAAVREVEEQKEDESQPTSLS
CCHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHH
RYKQGERRTPQLPLNVHEESPKIRRDIQVALTVVGRRNYLQEEADKRLDLRNINLRRVEL
HHHCCCCCCCCCCCEECCCCCHHHHHHEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEE
LGANLQRADLRGCDFRGADLRGCDFSGANLEGAELAGSILFEANFLKANLQGANIQGANL
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEEECCCCCCCCCCC
NRAELGGANLRSANLMGASLRAANLPGANLYKVNLQHAILKLANLCGAKLFLANLQGAKL
CHHHCCCCCCCCCCCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHCHHEEEECCCCCCC
GKANLSLCGLIGANLQGANLNGANLAEANLNAAKLQQAEMLFVDFTEASLTEADLCKANL
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCEEEEEEEECCCCCCHHHHHHHHH
MGANLQRASLYQANLFQCNLVGANLSDTNFCDVKLAGAILTGVKNLKPQQVSIAIGDRTT
CCCCCCHHHHHCCCCEEEEEEECCCCCCCEEEEEEHHHHHHHHHCCCCCEEEEEECCCCC
RLPDNVEIPIHWRQSS
CCCCCCEEEEEECCCC
>Mature Secondary Structure
MVRNYTIMPANKTDKLWRWLIGITVIFAVTIAVILFASSNPQGLTIQQKLQSRNQALTIT
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHCCCCEEEHH
AIIFLGLGVMINAYYAAKRVDVISKSALAAEKNLEISIQNAKLSEDRLISERLMTAVTQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
GHDKIETRTGAIYVLEKVAQDFPQEHWTVIEILTAFIRENAAVREVEEQKEDESQPTSLS
CCHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHH
RYKQGERRTPQLPLNVHEESPKIRRDIQVALTVVGRRNYLQEEADKRLDLRNINLRRVEL
HHHCCCCCCCCCCCEECCCCCHHHHHHEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEE
LGANLQRADLRGCDFRGADLRGCDFSGANLEGAELAGSILFEANFLKANLQGANIQGANL
ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEEECCCCCCCCCCC
NRAELGGANLRSANLMGASLRAANLPGANLYKVNLQHAILKLANLCGAKLFLANLQGAKL
CHHHCCCCCCCCCCCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHCHHEEEECCCCCCC
GKANLSLCGLIGANLQGANLNGANLAEANLNAAKLQQAEMLFVDFTEASLTEADLCKANL
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCEEEEEEEECCCCCCHHHHHHHHH
MGANLQRASLYQANLFQCNLVGANLSDTNFCDVKLAGAILTGVKNLKPQQVSIAIGDRTT
CCCCCCHHHHHCCCCEEEEEEECCCCCCCEEEEEEHHHHHHHHHCCCCCEEEEEECCCCC
RLPDNVEIPIHWRQSS
CCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA