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The map label for this gene is 17230782

Identifier: 17230782

GI number: 17230782

Start: 3970396

End: 3971925

Strand: Reverse

Name: 17230782

Synonym: all3290

Alternate gene names: NA

Gene position: 3971925-3970396 (Counterclockwise)

Preceding gene: 17230783

Following gene: 17230781

Centisome position: 61.93

GC content: 43.46

Gene sequence:

>1530_bases
GTGATTCGTCCTTGTAAACCAACATCGATTTACTTCCGCAGTAACTGGCATCAAAGGTTAACTGCCACTCTTCTTTTCGG
CAGCTTATTGCATACTACCATACCAACACCAGTGAACGCGCAAAATACTCCCGTCGTCAATATCACAAACCAAGCTACAT
ATACTTATCAAGATAGAGCTAGTAATAATCGATATCAAGGATTAACTATTAAAACTAATGTCAATCCTAGTCCTTTGGTT
GATCCATTAGGCAGGATTTTAGGTTGTGCTGGAACGCTCTTACCAGACTATACTGGTTTTTCTGTTAGCGTATATGAACC
TAATCCCAGTGACCCCACTGGCACAGAATTAGGGCAGTTAGTTTCTCTCACCCCTACAGAAGTTCCTGATATTCCTAATA
ACAATGTTCCTGGTGGGTTAAGACCAAATTCTGAGAACAGTAATCCTTATTTCATTACTAATAATCCGGCTGGTGTCTAT
AATTTTCTTCTCGACCCTAATCGTGGTCAAATCGAACCGGGTAGAACCTATATTTTTGTAGTTAATCCTCCAGCTAATTC
TGTTTATCGGCAACGGCGGATTAAAATTGAAATTCTCAATAGTACAGGCGCAATTAATAACAGTGTTGTCCGCTATATTG
CGACTTCTTTAGATGGTCAACCAATCGGTTTGAGTGGTGAATCTAGGGTAGAAAGCACCGTAGTTTTAGTTCCTAATGCC
GAAGTTGTGGGACTAGATTTATTGGCTTTTGAGTTCACCACAAATATGTGTCAGGCAACTCAAGCACAGCTGATTAAAAC
AGGCGATCGCGCTGCGGCTGAACCTGGAGATACTGTGATCTATCGTTTGTCGGTACGAAATTTATCTGATGCGGCTTTAA
GCAATGTGGAAATTACGGATACTTTACCTTTAGGTTTTAACTTTATTCCTAAGTCTGTGCGGGGTGAAATTGATGGGGAG
TCGGTAACTGTCACTCCCGTTAGTAATGGTAATACTATTACATTTCGCCCTAACGCCAATGTTCCTGTTGGTAAAGTCAT
TAACATTGCTTATGCGGCTCAACTCACGACTGATTCCTTGCGTGGTAGTGGTCGTAATAGTGCGATCGTGAATGCTGAAC
GGGCTGATAACAGATTTAGGATTAAGGATGGCCCAGCAACGCACCAGCTGAAGATTCGTCCAGGTATAGTTTCTGATTGC
GGCACTATTATTGGTCGGGTCTTTGATGACAAAAACTTTGACGGTGAACAACAACCGGGAGAAGCGGGAATTGCCAATGC
TGTAATTTTCCTCCAAGACGGTAACCGCATCACCACAGATCCCAACGGTTTATTCTCCCTCGCCAACGTTTTACCCGGAA
GTCACACGGGAGTATTAGACCTAAGTAGTGTCCCTGGTTACAAACTAGCTCCCAACGAGAAATTCCGCGAACGCAATAGC
CAATCCCGTCTAGTACGCCTCGAACCTGGTGGTTTGGTAAGGATGAACTTTGCGGTTACTCCCACCCCAGAGGAGGTAGT
CAAGCCATGA

Upstream 100 bases:

>100_bases
GTTAGCCGTTGTTCCAAGTTTCGATAACGACGGCTCATATTTGTATCAATCAAATGCCTTTATTCATAAATAACAGGGCG
CTTCTGAGAGGAAAAATTCA

Downstream 100 bases:

>100_bases
AACCTGTAAGTATTCTCAATTTGCGGTTGATGGGAGCAATGGCTGGGGCTTTAAGCTTTGTCTTGTATCCAGCAATAGTT
CACGCTGAAGCTCAGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Conserved Domain Protein; OmpA Family Outer Membrane Protein

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MIRPCKPTSIYFRSNWHQRLTATLLFGSLLHTTIPTPVNAQNTPVVNITNQATYTYQDRASNNRYQGLTIKTNVNPSPLV
DPLGRILGCAGTLLPDYTGFSVSVYEPNPSDPTGTELGQLVSLTPTEVPDIPNNNVPGGLRPNSENSNPYFITNNPAGVY
NFLLDPNRGQIEPGRTYIFVVNPPANSVYRQRRIKIEILNSTGAINNSVVRYIATSLDGQPIGLSGESRVESTVVLVPNA
EVVGLDLLAFEFTTNMCQATQAQLIKTGDRAAAEPGDTVIYRLSVRNLSDAALSNVEITDTLPLGFNFIPKSVRGEIDGE
SVTVTPVSNGNTITFRPNANVPVGKVINIAYAAQLTTDSLRGSGRNSAIVNAERADNRFRIKDGPATHQLKIRPGIVSDC
GTIIGRVFDDKNFDGEQQPGEAGIANAVIFLQDGNRITTDPNGLFSLANVLPGSHTGVLDLSSVPGYKLAPNEKFRERNS
QSRLVRLEPGGLVRMNFAVTPTPEEVVKP

Sequences:

>Translated_509_residues
MIRPCKPTSIYFRSNWHQRLTATLLFGSLLHTTIPTPVNAQNTPVVNITNQATYTYQDRASNNRYQGLTIKTNVNPSPLV
DPLGRILGCAGTLLPDYTGFSVSVYEPNPSDPTGTELGQLVSLTPTEVPDIPNNNVPGGLRPNSENSNPYFITNNPAGVY
NFLLDPNRGQIEPGRTYIFVVNPPANSVYRQRRIKIEILNSTGAINNSVVRYIATSLDGQPIGLSGESRVESTVVLVPNA
EVVGLDLLAFEFTTNMCQATQAQLIKTGDRAAAEPGDTVIYRLSVRNLSDAALSNVEITDTLPLGFNFIPKSVRGEIDGE
SVTVTPVSNGNTITFRPNANVPVGKVINIAYAAQLTTDSLRGSGRNSAIVNAERADNRFRIKDGPATHQLKIRPGIVSDC
GTIIGRVFDDKNFDGEQQPGEAGIANAVIFLQDGNRITTDPNGLFSLANVLPGSHTGVLDLSSVPGYKLAPNEKFRERNS
QSRLVRLEPGGLVRMNFAVTPTPEEVVKP
>Mature_509_residues
MIRPCKPTSIYFRSNWHQRLTATLLFGSLLHTTIPTPVNAQNTPVVNITNQATYTYQDRASNNRYQGLTIKTNVNPSPLV
DPLGRILGCAGTLLPDYTGFSVSVYEPNPSDPTGTELGQLVSLTPTEVPDIPNNNVPGGLRPNSENSNPYFITNNPAGVY
NFLLDPNRGQIEPGRTYIFVVNPPANSVYRQRRIKIEILNSTGAINNSVVRYIATSLDGQPIGLSGESRVESTVVLVPNA
EVVGLDLLAFEFTTNMCQATQAQLIKTGDRAAAEPGDTVIYRLSVRNLSDAALSNVEITDTLPLGFNFIPKSVRGEIDGE
SVTVTPVSNGNTITFRPNANVPVGKVINIAYAAQLTTDSLRGSGRNSAIVNAERADNRFRIKDGPATHQLKIRPGIVSDC
GTIIGRVFDDKNFDGEQQPGEAGIANAVIFLQDGNRITTDPNGLFSLANVLPGSHTGVLDLSSVPGYKLAPNEKFRERNS
QSRLVRLEPGGLVRMNFAVTPTPEEVVKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55035; Mature: 55035

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRPCKPTSIYFRSNWHQRLTATLLFGSLLHTTIPTPVNAQNTPVVNITNQATYTYQDRA
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEEECCCC
SNNRYQGLTIKTNVNPSPLVDPLGRILGCAGTLLPDYTGFSVSVYEPNPSDPTGTELGQL
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHE
VSLTPTEVPDIPNNNVPGGLRPNSENSNPYFITNNPAGVYNFLLDPNRGQIEPGRTYIFV
EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCEEEEE
VNPPANSVYRQRRIKIEILNSTGAINNSVVRYIATSLDGQPIGLSGESRVESTVVLVPNA
ECCCCHHHHHCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEEEEEECCC
EVVGLDLLAFEFTTNMCQATQAQLIKTGDRAAAEPGDTVIYRLSVRNLSDAALSNVEITD
CEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHCCEEEEE
TLPLGFNFIPKSVRGEIDGESVTVTPVSNGNTITFRPNANVPVGKVINIAYAAQLTTDSL
ECCCCCCCCCHHHCCCCCCCEEEEEECCCCCEEEECCCCCCCHHHEEEEEEEEEEEHHHH
RGSGRNSAIVNAERADNRFRIKDGPATHQLKIRPGIVSDCGTIIGRVFDDKNFDGEQQPG
CCCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCC
EAGIANAVIFLQDGNRITTDPNGLFSLANVLPGSHTGVLDLSSVPGYKLAPNEKFRERNS
CCCCCEEEEEEECCCEEECCCCHHHHHHHHCCCCCCCEEEECCCCCCEECCCHHHHHCCC
QSRLVRLEPGGLVRMNFAVTPTPEEVVKP
CCCEEEECCCCEEEEEEEECCCHHHHCCC
>Mature Secondary Structure
MIRPCKPTSIYFRSNWHQRLTATLLFGSLLHTTIPTPVNAQNTPVVNITNQATYTYQDRA
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEEEECCCC
SNNRYQGLTIKTNVNPSPLVDPLGRILGCAGTLLPDYTGFSVSVYEPNPSDPTGTELGQL
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHE
VSLTPTEVPDIPNNNVPGGLRPNSENSNPYFITNNPAGVYNFLLDPNRGQIEPGRTYIFV
EECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCEEEEE
VNPPANSVYRQRRIKIEILNSTGAINNSVVRYIATSLDGQPIGLSGESRVESTVVLVPNA
ECCCCHHHHHCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEEEEEECCC
EVVGLDLLAFEFTTNMCQATQAQLIKTGDRAAAEPGDTVIYRLSVRNLSDAALSNVEITD
CEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHCCEEEEE
TLPLGFNFIPKSVRGEIDGESVTVTPVSNGNTITFRPNANVPVGKVINIAYAAQLTTDSL
ECCCCCCCCCHHHCCCCCCCEEEEEECCCCCEEEECCCCCCCHHHEEEEEEEEEEEHHHH
RGSGRNSAIVNAERADNRFRIKDGPATHQLKIRPGIVSDCGTIIGRVFDDKNFDGEQQPG
CCCCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCC
EAGIANAVIFLQDGNRITTDPNGLFSLANVLPGSHTGVLDLSSVPGYKLAPNEKFRERNS
CCCCCEEEEEEECCCEEECCCCHHHHHHHHCCCCCCCEEEECCCCCCEECCCHHHHHCCC
QSRLVRLEPGGLVRMNFAVTPTPEEVVKP
CCCEEEECCCCEEEEEEEECCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA