Click here to switch to the map view.

The map label for this gene is 17230778

Identifier: 17230778

GI number: 17230778

Start: 3961191

End: 3962063

Strand: Reverse

Name: 17230778

Synonym: all3286

Alternate gene names: NA

Gene position: 3962063-3961191 (Counterclockwise)

Preceding gene: 17230780

Following gene: 17230776

Centisome position: 61.77

GC content: 37.8

Gene sequence:

>873_bases
ATGAATTTTCGTGACTGGGCTACCAGGGTTACGCTAATTTTTCTGATGTTAGCCGCTTTGATATTGGCATTATTAGCAGG
AAAATCTACACAAGTACAACAAAATACAGCAATACCATCAAACTCAGATATAGCAACTTGGAGACAATATCCTCAGATAC
AAATCCAGTCCGAAATAAACCAAGGTAACAAAGCCCAAGATATTGGCAATTTTCCAGTTATAACTAATCAGTCTTCTGGT
AGATATATAACTACTCAAACATTTGCTAAGTACAAGCCAAAATTAGAAATCGCGGCTGTACATCCAAGTAATTATGGTGA
ACGTTATACCCAAGATATTAATGGCTTACCGATAAAAAATCAACCAATTATTGTTCTGCATGAAACTAGTAACTCTGCTT
CCAGCGCAGTTAACTTTTTCCAAACACCCCATACAGATGAAACGGTTCAGGCAAGTTACCACGCCATAATTAAATTAGAT
GGAACTGTTTTATATTTAGTCCCTCCAGAAAAGCGAGCCTTTGGCGCTGCTAACTCAGTTTTTGATGGCACAGACGGTAT
TGAAACTGTGCAAACTAATCCTAACTTACCACCATCTGTGAATAATTTTGCCTATCATGTTTCCTTAGAAACACCACCAG
ATGGACGTGGCAATAATTTTCTAAAATCTCATAGTGGTTATACACCAGAGCAGTATAACTCTTTAGCTTGGTTAATTGCT
CAAAGCCAAGTACCAGAAGAGCGCATCACCACACACAAAGCAGTAGACCGTTCCAGCCAGAGAGTTGACCCCTTAAGTTT
TGATTTTGATAAATTCTTAGAATTACTCAACACTTATCGTCAAATAAGTCCAGTTTATAGAGCGCAAAAATAG

Upstream 100 bases:

>100_bases
GAAATACTTTTTATTGCCAAAAAAAATCTACTCATAACCTATTCTGTAACAAGAAAAGTATATTAAGATTAATTAAGGCA
GCATTATTAATTATAAAAAA

Downstream 100 bases:

>100_bases
TTTCAAACAACTCAATTACAATTCCTTAAATCCGCTTGATCGGACTTTGTGGAGGATGTCAAGTCCTCAAATTTCCATTT
TTTTGAATTTTGAATTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase Domain Protein; N-Acetyl-Anhydromuramyl-L-Alanine Amidase

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNFRDWATRVTLIFLMLAALILALLAGKSTQVQQNTAIPSNSDIATWRQYPQIQIQSEINQGNKAQDIGNFPVITNQSSG
RYITTQTFAKYKPKLEIAAVHPSNYGERYTQDINGLPIKNQPIIVLHETSNSASSAVNFFQTPHTDETVQASYHAIIKLD
GTVLYLVPPEKRAFGAANSVFDGTDGIETVQTNPNLPPSVNNFAYHVSLETPPDGRGNNFLKSHSGYTPEQYNSLAWLIA
QSQVPEERITTHKAVDRSSQRVDPLSFDFDKFLELLNTYRQISPVYRAQK

Sequences:

>Translated_290_residues
MNFRDWATRVTLIFLMLAALILALLAGKSTQVQQNTAIPSNSDIATWRQYPQIQIQSEINQGNKAQDIGNFPVITNQSSG
RYITTQTFAKYKPKLEIAAVHPSNYGERYTQDINGLPIKNQPIIVLHETSNSASSAVNFFQTPHTDETVQASYHAIIKLD
GTVLYLVPPEKRAFGAANSVFDGTDGIETVQTNPNLPPSVNNFAYHVSLETPPDGRGNNFLKSHSGYTPEQYNSLAWLIA
QSQVPEERITTHKAVDRSSQRVDPLSFDFDKFLELLNTYRQISPVYRAQK
>Mature_290_residues
MNFRDWATRVTLIFLMLAALILALLAGKSTQVQQNTAIPSNSDIATWRQYPQIQIQSEINQGNKAQDIGNFPVITNQSSG
RYITTQTFAKYKPKLEIAAVHPSNYGERYTQDINGLPIKNQPIIVLHETSNSASSAVNFFQTPHTDETVQASYHAIIKLD
GTVLYLVPPEKRAFGAANSVFDGTDGIETVQTNPNLPPSVNNFAYHVSLETPPDGRGNNFLKSHSGYTPEQYNSLAWLIA
QSQVPEERITTHKAVDRSSQRVDPLSFDFDKFLELLNTYRQISPVYRAQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32445; Mature: 32445

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFRDWATRVTLIFLMLAALILALLAGKSTQVQQNTAIPSNSDIATWRQYPQIQIQSEIN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHCCCEEEEECCC
QGNKAQDIGNFPVITNQSSGRYITTQTFAKYKPKLEIAAVHPSNYGERYTQDINGLPIKN
CCCCCCCCCCCCEEEECCCCCEEEECHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCCCC
QPIIVLHETSNSASSAVNFFQTPHTDETVQASYHAIIKLDGTVLYLVPPEKRAFGAANSV
CCEEEEECCCCCHHHHHHHHCCCCCCHHHHCCEEEEEEECCEEEEEECCCHHHCCCCCCC
FDGTDGIETVQTNPNLPPSVNNFAYHVSLETPPDGRGNNFLKSHSGYTPEQYNSLAWLIA
CCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHCCCCCCHHHHCCEEEEEE
QSQVPEERITTHKAVDRSSQRVDPLSFDFDKFLELLNTYRQISPVYRAQK
CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFRDWATRVTLIFLMLAALILALLAGKSTQVQQNTAIPSNSDIATWRQYPQIQIQSEIN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHCCCEEEEECCC
QGNKAQDIGNFPVITNQSSGRYITTQTFAKYKPKLEIAAVHPSNYGERYTQDINGLPIKN
CCCCCCCCCCCCEEEECCCCCEEEECHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCCCC
QPIIVLHETSNSASSAVNFFQTPHTDETVQASYHAIIKLDGTVLYLVPPEKRAFGAANSV
CCEEEEECCCCCHHHHHHHHCCCCCCHHHHCCEEEEEEECCEEEEEECCCHHHCCCCCCC
FDGTDGIETVQTNPNLPPSVNNFAYHVSLETPPDGRGNNFLKSHSGYTPEQYNSLAWLIA
CCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHCCCCCCHHHHCCEEEEEE
QSQVPEERITTHKAVDRSSQRVDPLSFDFDKFLELLNTYRQISPVYRAQK
CCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA