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The map label for this gene is ynhG [H]

Identifier: 17230770

GI number: 17230770

Start: 3952851

End: 3953669

Strand: Reverse

Name: ynhG [H]

Synonym: all3278

Alternate gene names: 17230770

Gene position: 3953669-3952851 (Counterclockwise)

Preceding gene: 17230774

Following gene: 17230767

Centisome position: 61.64

GC content: 44.57

Gene sequence:

>819_bases
ATGGCAATGGTAAGAAATGAATCTGTAGGGCGTATGGTAATGTTTCTCTGCTTTGGCACAGCCATATTATCGTTAGCTGT
GCATTGGCGCATTACTACAGCGCAGGGTCAGTTTAAAAAGCCAGTCCCCACCACAGCAAGCCGCCCTGGAGAGGTTTATA
CGGGGGGTTTAGGCGAAACCGCTTTTGGCGCACCTGCACCCTTTGGTGCCACTACTCCAGATAAACTATCTCAACCGCAG
TCTTCGGCTATTAAATCTCATAATAAGTCGGATACTGTTAGCCAAAATGTAGCTTTAGCGACTAACTCACCTAAAAAAAC
ACAGTTACTAACACCAGAATCAAGAAAAAACGCTGATTTATCAGATCAAAGTCAGTTACGATTATCTCAACCTGCGGCAC
ATAAAAAAACATCTAATAAGCTAGGAAATACCAAGAAGGAAGTGGTGGTTGATTTAAGCGATCGCCGCACTTACGTTTAT
GCTGGAGATATAGTTATAGCTAGTTACCCAATTGCTATCGGTAAGAGGGGTTGGGAAACACCTACGGGTACTTTCAATGT
GTCACACATGGAACACGATCCCATCTGGCGACACCCCATCACAGGCAAAATATTCCCTGCCGGTGTTGATAGTCCTTTAG
GGGAAAGATGGATTGGTTTTTGGTCTGATGGACGTAATAAAATCGGCTTTCACGGTACACCAGACACTCATCTTCTGGGA
ACAGCGATTTCTCACGGCTGTCTGAGGATGCGTAATTCTGATGTCCGTTTGCTTTATGACCAAGTAGAATTAGGTACACC
TGTGATAGTGCAGGATTAG

Upstream 100 bases:

>100_bases
TAGTTATGAGGGAACAGATAAGAATTTATAAATTCTTGATAATTAGAGAATAAAAATGTTCAATTGGTCGGCTGAATATG
TCAGGGATAAACAATAGGCG

Downstream 100 bases:

>100_bases
TCAGTTGTAAGTAGTCATTGGTCAGTGGTAAAACCGAAAAAGTAACGACTAACAACTGACAACTGACTAATTATGAAGAC
TTCTGCTCAAAACTAGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MAMVRNESVGRMVMFLCFGTAILSLAVHWRITTAQGQFKKPVPTTASRPGEVYTGGLGETAFGAPAPFGATTPDKLSQPQ
SSAIKSHNKSDTVSQNVALATNSPKKTQLLTPESRKNADLSDQSQLRLSQPAAHKKTSNKLGNTKKEVVVDLSDRRTYVY
AGDIVIASYPIAIGKRGWETPTGTFNVSHMEHDPIWRHPITGKIFPAGVDSPLGERWIGFWSDGRNKIGFHGTPDTHLLG
TAISHGCLRMRNSDVRLLYDQVELGTPVIVQD

Sequences:

>Translated_272_residues
MAMVRNESVGRMVMFLCFGTAILSLAVHWRITTAQGQFKKPVPTTASRPGEVYTGGLGETAFGAPAPFGATTPDKLSQPQ
SSAIKSHNKSDTVSQNVALATNSPKKTQLLTPESRKNADLSDQSQLRLSQPAAHKKTSNKLGNTKKEVVVDLSDRRTYVY
AGDIVIASYPIAIGKRGWETPTGTFNVSHMEHDPIWRHPITGKIFPAGVDSPLGERWIGFWSDGRNKIGFHGTPDTHLLG
TAISHGCLRMRNSDVRLLYDQVELGTPVIVQD
>Mature_271_residues
AMVRNESVGRMVMFLCFGTAILSLAVHWRITTAQGQFKKPVPTTASRPGEVYTGGLGETAFGAPAPFGATTPDKLSQPQS
SAIKSHNKSDTVSQNVALATNSPKKTQLLTPESRKNADLSDQSQLRLSQPAAHKKTSNKLGNTKKEVVVDLSDRRTYVYA
GDIVIASYPIAIGKRGWETPTGTFNVSHMEHDPIWRHPITGKIFPAGVDSPLGERWIGFWSDGRNKIGFHGTPDTHLLGT
AISHGCLRMRNSDVRLLYDQVELGTPVIVQD

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=140, Percent_Identity=32.1428571428571, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1788299, Length=143, Percent_Identity=32.1678321678322, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787356, Length=139, Percent_Identity=31.6546762589928, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787040, Length=137, Percent_Identity=30.6569343065693, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 29647; Mature: 29516

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMVRNESVGRMVMFLCFGTAILSLAVHWRITTAQGQFKKPVPTTASRPGEVYTGGLGET
CCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCC
AFGAPAPFGATTPDKLSQPQSSAIKSHNKSDTVSQNVALATNSPKKTQLLTPESRKNADL
CCCCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCC
SDQSQLRLSQPAAHKKTSNKLGNTKKEVVVDLSDRRTYVYAGDIVIASYPIAIGKRGWET
CCCHHEEECCCCHHHHHHHHCCCCCEEEEEEECCCEEEEEECCEEEEECCCEECCCCCCC
PTGTFNVSHMEHDPIWRHPITGKIFPAGVDSPLGERWIGFWSDGRNKIGFHGTPDTHLLG
CCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCHHEEEEECCCCCCCCCCCCCCCHHHH
TAISHGCLRMRNSDVRLLYDQVELGTPVIVQD
HHHHHHHHEECCCCEEEEEEEHHCCCCEEEEC
>Mature Secondary Structure 
AMVRNESVGRMVMFLCFGTAILSLAVHWRITTAQGQFKKPVPTTASRPGEVYTGGLGET
CCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCC
AFGAPAPFGATTPDKLSQPQSSAIKSHNKSDTVSQNVALATNSPKKTQLLTPESRKNADL
CCCCCCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCC
SDQSQLRLSQPAAHKKTSNKLGNTKKEVVVDLSDRRTYVYAGDIVIASYPIAIGKRGWET
CCCHHEEECCCCHHHHHHHHCCCCCEEEEEEECCCEEEEEECCEEEEECCCEECCCCCCC
PTGTFNVSHMEHDPIWRHPITGKIFPAGVDSPLGERWIGFWSDGRNKIGFHGTPDTHLLG
CCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCHHEEEEECCCCCCCCCCCCCCCHHHH
TAISHGCLRMRNSDVRLLYDQVELGTPVIVQD
HHHHHHHHEECCCCEEEEEEEHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]