Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17230749

Identifier: 17230749

GI number: 17230749

Start: 3930664

End: 3931305

Strand: Reverse

Name: 17230749

Synonym: all3257

Alternate gene names: NA

Gene position: 3931305-3930664 (Counterclockwise)

Preceding gene: 17230751

Following gene: 17230748

Centisome position: 61.29

GC content: 47.82

Gene sequence:

>642_bases
TTGGGAATAGAACTACGCAGTTTCGTATTTCTCGACAGCCTGCAACCACAACACGCGGCCTATATAGGAACAGTAGCCCA
AGGTTTCTTGCCATTACCAGGAGATACATCACTGTGGATTGAAATTTCTCCTGGTATCGAGATTAATAAAATTACCGACA
TAGCCCTCAAAGCTGCTTCTGTCCGCCCTGGAGTGCAAGTAGTTGAGAGATTGTACGGTCTATTAGAAATACATTCAGGC
TCTCAAGGCGAAACGCGAGCTGCTGGTCAAGCGATTTTGGCGGCTCTAGGAGTCAAAAGAGAAGAGTGTATTAAACCGCG
AATTGTTTCCAGCCAGATTATTAGGAATATAGACGCTTACCAAACCCAATTGATTAACCGGACGCGACGAGGACAGCTAC
TCCTAGCCGGGCAAACTCTATATGTATTAGAAGTTGAGCCTGCTGCTTATGCTGCTTTAGCAGCCAATGAAGCCGAGAAA
GCAGCCTCAATTAACATCCTAGAAGTTCAAGCTGTCGGTAGCTTTGGCAGGTTGTATCTAGGTGGGCAAGAAAGGGATAT
TCTCGCTGGTGCGGCGGGAGCGAGAGCAGCCATAGAAAGCGTTGCTGGCCGGAGCAATTCCCATAGTGGTCGCCAGGAGT
AA

Upstream 100 bases:

>100_bases
TGGGATGATGCTGAAAGGTAGTACTAGCCTTATGGTAGTTTTAAGTTACATTCATATATTGCGAAATATTACTTTAACCT
CATGACTGGAGAGCATCACC

Downstream 100 bases:

>100_bases
AGGAGAGACAATGGCAAATCTAGAGCATCTAGCTTTATTACGAGCAGGTGCAGTGAGATGGATTGAGTGGAGACAAAAAA
ATCCGCAAATTGAACCAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Bacterial Microcompartments Protein Family; Microcompartments Protein Family Protein

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MGIELRSFVFLDSLQPQHAAYIGTVAQGFLPLPGDTSLWIEISPGIEINKITDIALKAASVRPGVQVVERLYGLLEIHSG
SQGETRAAGQAILAALGVKREECIKPRIVSSQIIRNIDAYQTQLINRTRRGQLLLAGQTLYVLEVEPAAYAALAANEAEK
AASINILEVQAVGSFGRLYLGGQERDILAGAAGARAAIESVAGRSNSHSGRQE

Sequences:

>Translated_213_residues
MGIELRSFVFLDSLQPQHAAYIGTVAQGFLPLPGDTSLWIEISPGIEINKITDIALKAASVRPGVQVVERLYGLLEIHSG
SQGETRAAGQAILAALGVKREECIKPRIVSSQIIRNIDAYQTQLINRTRRGQLLLAGQTLYVLEVEPAAYAALAANEAEK
AASINILEVQAVGSFGRLYLGGQERDILAGAAGARAAIESVAGRSNSHSGRQE
>Mature_212_residues
GIELRSFVFLDSLQPQHAAYIGTVAQGFLPLPGDTSLWIEISPGIEINKITDIALKAASVRPGVQVVERLYGLLEIHSGS
QGETRAAGQAILAALGVKREECIKPRIVSSQIIRNIDAYQTQLINRTRRGQLLLAGQTLYVLEVEPAAYAALAANEAEKA
ASINILEVQAVGSFGRLYLGGQERDILAGAAGARAAIESVAGRSNSHSGRQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22700; Mature: 22569

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIELRSFVFLDSLQPQHAAYIGTVAQGFLPLPGDTSLWIEISPGIEINKITDIALKAAS
CCCCHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHCC
VRPGVQVVERLYGLLEIHSGSQGETRAAGQAILAALGVKREECIKPRIVSSQIIRNIDAY
CCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHH
QTQLINRTRRGQLLLAGQTLYVLEVEPAAYAALAANEAEKAASINILEVQAVGSFGRLYL
HHHHHHHHCCCCEEEECCEEEEEEECCHHHHHHHHCCHHHHHCEEEEEEEECCCCCEEEE
GGQERDILAGAAGARAAIESVAGRSNSHSGRQE
CCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
GIELRSFVFLDSLQPQHAAYIGTVAQGFLPLPGDTSLWIEISPGIEINKITDIALKAAS
CCCHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHCC
VRPGVQVVERLYGLLEIHSGSQGETRAAGQAILAALGVKREECIKPRIVSSQIIRNIDAY
CCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHH
QTQLINRTRRGQLLLAGQTLYVLEVEPAAYAALAANEAEKAASINILEVQAVGSFGRLYL
HHHHHHHHCCCCEEEECCEEEEEEECCHHHHHHHHCCHHHHHCEEEEEEEECCCCCEEEE
GGQERDILAGAAGARAAIESVAGRSNSHSGRQE
CCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA