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The map label for this gene is yjcF [C]

Identifier: 17230748

GI number: 17230748

Start: 3929847

End: 3930653

Strand: Reverse

Name: yjcF [C]

Synonym: all3256

Alternate gene names: 17230748

Gene position: 3930653-3929847 (Counterclockwise)

Preceding gene: 17230749

Following gene: 17230747

Centisome position: 61.28

GC content: 45.48

Gene sequence:

>807_bases
ATGGCAAATCTAGAGCATCTAGCTTTATTACGAGCAGGTGCAGTGAGATGGATTGAGTGGAGACAAAAAAATCCGCAAAT
TGAACCAGACCTCAGCACCTCAAACCTACAAGAAAATAACCTCAGAGGCGCAAATCTTGCAGGCGCTAACTTAAGCCGAG
TAGACTTAAGTCGCGCTCTGCTTATACGTGCTAACCTCAGTGGTGCTGACCTCAGTAGCGCCAATCTCCACCACGCAAAA
CTCAGTGAAGCTAACTTGAGTGCCGCTAATTTTAGTGTGGCTAACTTGAGCCAATCCGTACTTACACACGCAGATTTGAG
CCATGCTCATTTCATTGGTGCTGATTTTAGTGGAGCCAATCTCCGGGGTGCTATTGTGACGGAGGCTAACTTAATTGGTA
CCGATTTCAGTAGTGCTGATTTGAGAGATGCTGATTTGGCTGGAGCAAAACTCATCCGCTCTAACCTTTGTTTTGCGAAT
CTTATCGCTGCTAATTTCATTGCGGTTGATTTCAGCGAGGCAAATCTATATCAAGCCGAAGTGATGGGAGCTTACCTTTA
CAAAGCCAACTTCTACAAAGCTAATTTACATCAAGCACATCTAGGAGGTGCGTACCTATTTCGGGCAAATTTAACCGCAG
CTGACTTGAGAGGCGCTGATTTAGCTTGGGCTAATCTCACCAGTGCTAATTTAGCAGGGGCTAATCTGAGCGGTGCTAAT
CTTAGGGGGGCTAATTTGAACGGTGCTAACCTCAATGGGGTCAATCTCCAAGAAACAATTATGCCTGACTCTTCAAGGCA
TGATTAG

Upstream 100 bases:

>100_bases
AGGGATATTCTCGCTGGTGCGGCGGGAGCGAGAGCAGCCATAGAAAGCGTTGCTGGCCGGAGCAATTCCCATAGTGGTCG
CCAGGAGTAAAGGAGAGACA

Downstream 100 bases:

>100_bases
TTCACAACAACTAGTGCAGCAGGTTGTATACAATCGATGAGAAGCCTATAGAATAGGCTTTTTAGCTTTTGTAGCTTGCT
TTCCTTCGCAAAGGGTAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MANLEHLALLRAGAVRWIEWRQKNPQIEPDLSTSNLQENNLRGANLAGANLSRVDLSRALLIRANLSGADLSSANLHHAK
LSEANLSAANFSVANLSQSVLTHADLSHAHFIGADFSGANLRGAIVTEANLIGTDFSSADLRDADLAGAKLIRSNLCFAN
LIAANFIAVDFSEANLYQAEVMGAYLYKANFYKANLHQAHLGGAYLFRANLTAADLRGADLAWANLTSANLAGANLSGAN
LRGANLNGANLNGVNLQETIMPDSSRHD

Sequences:

>Translated_268_residues
MANLEHLALLRAGAVRWIEWRQKNPQIEPDLSTSNLQENNLRGANLAGANLSRVDLSRALLIRANLSGADLSSANLHHAK
LSEANLSAANFSVANLSQSVLTHADLSHAHFIGADFSGANLRGAIVTEANLIGTDFSSADLRDADLAGAKLIRSNLCFAN
LIAANFIAVDFSEANLYQAEVMGAYLYKANFYKANLHQAHLGGAYLFRANLTAADLRGADLAWANLTSANLAGANLSGAN
LRGANLNGANLNGVNLQETIMPDSSRHD
>Mature_267_residues
ANLEHLALLRAGAVRWIEWRQKNPQIEPDLSTSNLQENNLRGANLAGANLSRVDLSRALLIRANLSGADLSSANLHHAKL
SEANLSAANFSVANLSQSVLTHADLSHAHFIGADFSGANLRGAIVTEANLIGTDFSSADLRDADLAGAKLIRSNLCFANL
IAANFIAVDFSEANLYQAEVMGAYLYKANFYKANLHQAHLGGAYLFRANLTAADLRGADLAWANLTSANLAGANLSGANL
RGANLNGANLNGVNLQETIMPDSSRHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=199, Percent_Identity=33.6683417085427, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI221377802, Length=196, Percent_Identity=30.6122448979592, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 28471; Mature: 28340

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANLEHLALLRAGAVRWIEWRQKNPQIEPDLSTSNLQENNLRGANLAGANLSRVDLSRAL
CCCHHHHHHHHHCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHCEEE
LIRANLSGADLSSANLHHAKLSEANLSAANFSVANLSQSVLTHADLSHAHFIGADFSGAN
EEEECCCCCCCCCCCCCCEECCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEECCCCCCC
LRGAIVTEANLIGTDFSSADLRDADLAGAKLIRSNLCFANLIAANFIAVDFSEANLYQAE
EEEEEEEECEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHEEEEEECCCCCEEHHH
VMGAYLYKANFYKANLHQAHLGGAYLFRANLTAADLRGADLAWANLTSANLAGANLSGAN
HHEEEEEECEEEECCCEEECCCEEEEEEECCCHHHCCCCCEEEEECCCCCCCCCCCCCCC
LRGANLNGANLNGVNLQETIMPDSSRHD
CCCCCCCCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure 
ANLEHLALLRAGAVRWIEWRQKNPQIEPDLSTSNLQENNLRGANLAGANLSRVDLSRAL
CCHHHHHHHHHCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHCEEE
LIRANLSGADLSSANLHHAKLSEANLSAANFSVANLSQSVLTHADLSHAHFIGADFSGAN
EEEECCCCCCCCCCCCCCEECCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEECCCCCCC
LRGAIVTEANLIGTDFSSADLRDADLAGAKLIRSNLCFANLIAANFIAVDFSEANLYQAE
EEEEEEEECEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHEEEEEECCCCCEEHHH
VMGAYLYKANFYKANLHQAHLGGAYLFRANLTAADLRGADLAWANLTSANLAGANLSGAN
HHEEEEEECEEEECCCEEECCCEEEEEEECCCHHHCCCCCEEEEECCCCCCCCCCCCCCC
LRGANLNGANLNGVNLQETIMPDSSRHD
CCCCCCCCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA