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The map label for this gene is ybcJ [C]

Identifier: 17230745

GI number: 17230745

Start: 3927810

End: 3928091

Strand: Reverse

Name: ybcJ [C]

Synonym: asl3253

Alternate gene names: 17230745

Gene position: 3928091-3927810 (Counterclockwise)

Preceding gene: 17230746

Following gene: 17230737

Centisome position: 61.24

GC content: 43.97

Gene sequence:

>282_bases
GTGTTGTATATTTATGGGATGGGTGTCCGCACCTGTCCTTGTTTTTTGGCTCAGTATAAATTAATTCTGATAAGCATGAT
TAAACTGGATCAGTTTTTGAAGTTAGTCGGTATAGCCCCGACTGGAGGGCAAGCCAAGCTGATGATTATGGATGGTGATG
TCAAAGTTAATGGTGCAGTAGAAACTCGACGGGGACGAAAGTTAGTATCAAGCGATCGCGTGACGGTGGCGGGGCAAGTT
TTTGAGGTTGGAGACGTAATATCAAGTTCGGCTAATGACTAA

Upstream 100 bases:

>100_bases
CCTACGAGAGATTTCGTGGTTCAGCCAAGCAACACGTAGAGGAAGCAGTGCCAGATTTTGCCAAACTAATTGAGAAATAC
ACAAAGGCTTAAAAAGTTAG

Downstream 100 bases:

>100_bases
AGCTCAATAGTCAATAGATTTAAATCTTCGGTGATTTGAGGATACTTAGTAATAGTATTGACCAAGGTACTTTAATATCG
GGTATAAGCCAGGAATGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: S4 Domain-Containing Protein

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MLYIYGMGVRTCPCFLAQYKLILISMIKLDQFLKLVGIAPTGGQAKLMIMDGDVKVNGAVETRRGRKLVSSDRVTVAGQV
FEVGDVISSSAND

Sequences:

>Translated_93_residues
MLYIYGMGVRTCPCFLAQYKLILISMIKLDQFLKLVGIAPTGGQAKLMIMDGDVKVNGAVETRRGRKLVSSDRVTVAGQV
FEVGDVISSSAND
>Mature_93_residues
MLYIYGMGVRTCPCFLAQYKLILISMIKLDQFLKLVGIAPTGGQAKLMIMDGDVKVNGAVETRRGRKLVSSDRVTVAGQV
FEVGDVISSSAND

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10070; Mature: 10070

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYIYGMGVRTCPCFLAQYKLILISMIKLDQFLKLVGIAPTGGQAKLMIMDGDVKVNGAV
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCE
ETRRGRKLVSSDRVTVAGQVFEVGDVISSSAND
ECCCCCCCCCCCCEEEEEEEEEHHHHHCCCCCC
>Mature Secondary Structure
MLYIYGMGVRTCPCFLAQYKLILISMIKLDQFLKLVGIAPTGGQAKLMIMDGDVKVNGAV
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCE
ETRRGRKLVSSDRVTVAGQVFEVGDVISSSAND
ECCCCCCCCCCCCEEEEEEEEEHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA