Click here to switch to the map view.

The map label for this gene is 17230743

Identifier: 17230743

GI number: 17230743

Start: 3925959

End: 3926774

Strand: Direct

Name: 17230743

Synonym: alr3251

Alternate gene names: NA

Gene position: 3925959-3926774 (Clockwise)

Preceding gene: 17230742

Following gene: 17230744

Centisome position: 61.21

GC content: 43.63

Gene sequence:

>816_bases
ATGGTTGCCCAAATCCAAGAACTAGATGCCCAGCATTGGGTGAAGACTCGCTCTTCCCTCGACCCTAATCAATCAACATT
CCTCACCTGGACAGGGAAAATTTATGCCTTGATTCCAGGAGAAAAAAGAAAACTCCTCTTTAAAATGGTGGGAGTCAGCG
TTAGTAGATGTCTACCTACAGATGCGGGTAGCTGGGATTTTACTTCTAGGGAACTCACCTATTACTTGAACCCAGAAAAC
GACGAGATTTTACGTAAATGGGAAAATCCTTGGACAGGGGAGACAGTACCAGTTCTCCATGTCGCCAATAATCCCGTACA
AGGTCACTTTCGAGGTAAATTCCCGGCTCAAGTTGAAGGTGAAACAACAACCTTTGTATTTGATATCTTTCCTACATACC
CCAACCCCCTCGCCGAAGAACCACAATTTGCTGAATATAGCCCTTATCCAACTTATCAAGCAGCCGAATTATTTAAACTC
ACAGTCCCCACGGTAGATTTATTTAACGCAGAACTGCCAGCAGTTTCTCAACTCATACTCAGTTGGGATAGAATCGGTCA
ATGGTTGCCTTGGATGAAAATGGGCGATCGCCCAGGTAATCTGATCTATAGTGCTTTTGGCAGTAAAGTTAACGGTTTAA
CAGAATTACCCCACATATTACAAGAGGAAATTAATACCCGTGTTCCTTTATATAAACAAGCTCCGAAAGCATTTTTAGAC
GGCGAAGACATGACCTCTTGGCTATACTTCCAAAAGCACTTTCAGGCTTACCTAGCAGGTGAAATCTTTCCCCTCCCCGC
AGATGAAGAAGTGTGA

Upstream 100 bases:

>100_bases
GTTGCTAGAATTGCGATCGCAATTATCGGAACCGCCAGACCTGGAATTTCAAGCATTGATGAGTTTATTAGACGATTAAA
TTTAGTGGTTAAACAAGTTA

Downstream 100 bases:

>100_bases
GGCAGTTAACAGTCAACCGTCAACAAACAATTATGAAACTCCTAGAGGGGAAAGTGGCGTTAGTTACCGGCGCTACACGC
GGTCTTGGTAAGGGAATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MVAQIQELDAQHWVKTRSSLDPNQSTFLTWTGKIYALIPGEKRKLLFKMVGVSVSRCLPTDAGSWDFTSRELTYYLNPEN
DEILRKWENPWTGETVPVLHVANNPVQGHFRGKFPAQVEGETTTFVFDIFPTYPNPLAEEPQFAEYSPYPTYQAAELFKL
TVPTVDLFNAELPAVSQLILSWDRIGQWLPWMKMGDRPGNLIYSAFGSKVNGLTELPHILQEEINTRVPLYKQAPKAFLD
GEDMTSWLYFQKHFQAYLAGEIFPLPADEEV

Sequences:

>Translated_271_residues
MVAQIQELDAQHWVKTRSSLDPNQSTFLTWTGKIYALIPGEKRKLLFKMVGVSVSRCLPTDAGSWDFTSRELTYYLNPEN
DEILRKWENPWTGETVPVLHVANNPVQGHFRGKFPAQVEGETTTFVFDIFPTYPNPLAEEPQFAEYSPYPTYQAAELFKL
TVPTVDLFNAELPAVSQLILSWDRIGQWLPWMKMGDRPGNLIYSAFGSKVNGLTELPHILQEEINTRVPLYKQAPKAFLD
GEDMTSWLYFQKHFQAYLAGEIFPLPADEEV
>Mature_271_residues
MVAQIQELDAQHWVKTRSSLDPNQSTFLTWTGKIYALIPGEKRKLLFKMVGVSVSRCLPTDAGSWDFTSRELTYYLNPEN
DEILRKWENPWTGETVPVLHVANNPVQGHFRGKFPAQVEGETTTFVFDIFPTYPNPLAEEPQFAEYSPYPTYQAAELFKL
TVPTVDLFNAELPAVSQLILSWDRIGQWLPWMKMGDRPGNLIYSAFGSKVNGLTELPHILQEEINTRVPLYKQAPKAFLD
GEDMTSWLYFQKHFQAYLAGEIFPLPADEEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31023; Mature: 31023

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAQIQELDAQHWVKTRSSLDPNQSTFLTWTGKIYALIPGEKRKLLFKMVGVSVSRCLPT
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHCCC
DAGSWDFTSRELTYYLNPENDEILRKWENPWTGETVPVLHVANNPVQGHFRGKFPAQVEG
CCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCEECCCCCCEECC
ETTTFVFDIFPTYPNPLAEEPQFAEYSPYPTYQAAELFKLTVPTVDLFNAELPAVSQLIL
CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCEECCCCCHHHHHHHH
SWDRIGQWLPWMKMGDRPGNLIYSAFGSKVNGLTELPHILQEEINTRVPLYKQAPKAFLD
HHHHHHCCCCHHHCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHCCHHHCC
GEDMTSWLYFQKHFQAYLAGEIFPLPADEEV
CCHHHHHHHHHHHHHHHHCCCEECCCCCCCC
>Mature Secondary Structure
MVAQIQELDAQHWVKTRSSLDPNQSTFLTWTGKIYALIPGEKRKLLFKMVGVSVSRCLPT
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHCCC
DAGSWDFTSRELTYYLNPENDEILRKWENPWTGETVPVLHVANNPVQGHFRGKFPAQVEG
CCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCEECCCCCCEECC
ETTTFVFDIFPTYPNPLAEEPQFAEYSPYPTYQAAELFKLTVPTVDLFNAELPAVSQLIL
CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCEECCCCCHHHHHHHH
SWDRIGQWLPWMKMGDRPGNLIYSAFGSKVNGLTELPHILQEEINTRVPLYKQAPKAFLD
HHHHHHCCCCHHHCCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHCCHHHCC
GEDMTSWLYFQKHFQAYLAGEIFPLPADEEV
CCHHHHHHHHHHHHHHHHCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA