Click here to switch to the map view.

The map label for this gene is 17230723

Identifier: 17230723

GI number: 17230723

Start: 3901870

End: 3902187

Strand: Direct

Name: 17230723

Synonym: alr3231

Alternate gene names: NA

Gene position: 3901870-3902187 (Clockwise)

Preceding gene: 17230722

Following gene: 17230725

Centisome position: 60.84

GC content: 41.19

Gene sequence:

>318_bases
ATGAACAACGAAACTCAACAAACAGATACATCAGGACAAGTTCCACCTACGCCATTACGCTGCATAACAGGAGCAGGTAT
TTCTGGCGGAATGGGATATGCTTTGTATTTATTAATGATATCCATCGCTACAACCTTTGCCAAAAAACCCATCCACTCGG
ATAACCAGTTAGTTATCAGCTTGACCTCTGCTGTGCGTACCTTGGTAGTTGGGATAGTCGCTTTGGGAACAGGGATATTT
GCTATAGTGACAATTGGTTTGTTAGCATTAGCCGTACAACTGTTAGTGCAGCAGTTGATAAAACCTAAAAGTAATTAA

Upstream 100 bases:

>100_bases
TCAGCAGCAAGTAAGACAAACAATTCCCGACGAAGATTTAGAATTATTTGTAACTCGCACAATTACACATGGGATTCAAG
TTGTGGGTAATGGGTAACTT

Downstream 100 bases:

>100_bases
AGGGTATAAATGTTTTAAACCCCTACACCCTTACACCCGGTCTCAACAGACAATCTGGGTGCGTAAGTCCTAATTAACTC
CGGCTAGTCAATAAGCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MNNETQQTDTSGQVPPTPLRCITGAGISGGMGYALYLLMISIATTFAKKPIHSDNQLVISLTSAVRTLVVGIVALGTGIF
AIVTIGLLALAVQLLVQQLIKPKSN

Sequences:

>Translated_105_residues
MNNETQQTDTSGQVPPTPLRCITGAGISGGMGYALYLLMISIATTFAKKPIHSDNQLVISLTSAVRTLVVGIVALGTGIF
AIVTIGLLALAVQLLVQQLIKPKSN
>Mature_105_residues
MNNETQQTDTSGQVPPTPLRCITGAGISGGMGYALYLLMISIATTFAKKPIHSDNQLVISLTSAVRTLVVGIVALGTGIF
AIVTIGLLALAVQLLVQQLIKPKSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10949; Mature: 10949

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNETQQTDTSGQVPPTPLRCITGAGISGGMGYALYLLMISIATTFAKKPIHSDNQLVIS
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LTSAVRTLVVGIVALGTGIFAIVTIGLLALAVQLLVQQLIKPKSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNNETQQTDTSGQVPPTPLRCITGAGISGGMGYALYLLMISIATTFAKKPIHSDNQLVIS
CCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LTSAVRTLVVGIVALGTGIFAIVTIGLLALAVQLLVQQLIKPKSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA