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The map label for this gene is yjbQ [C]

Identifier: 17230706

GI number: 17230706

Start: 3882226

End: 3882705

Strand: Direct

Name: yjbQ [C]

Synonym: alr3214

Alternate gene names: 17230706

Gene position: 3882226-3882705 (Clockwise)

Preceding gene: 17230705

Following gene: 17230707

Centisome position: 60.53

GC content: 38.75

Gene sequence:

>480_bases
ATGGAAATGTGGCGATCGCTCAAGCTATTATTAATTATTTCTAGTCTCATAAAAATATCTATAACTATGACTCACTACCA
AAAACTCCTGAGAGTTTCTACGAACGGTAAATCATTCCACAATATTACTGCCAAAATTGAATCTATCGTTGCAGAATCTG
GTGTGGAAACTGGACTTTGTACTTTATTTTTGCGCCATACTTCTGCCAGTTTAGTGATTCAAGAAAATGCTGACCCAGAT
GTACTTGTGGATTTAGCTAATTATATGGCTAAACTTGTGCCAGAATCTGGGAAATATATTCATGATGCTGAAGGTGCTGA
TGATATGCCGGCACATATCCGCACGGCTTTGACTCACACTTCTGAAAATATTCCGATAAATCGTGGTCATTTGGTGTTGG
GAACTTGGCAGGGAATATATGTTTGGGAACATCGTCAGCACAGTCATGTCAGAGAATTAGTTGTGCATATCTCGCAATAG

Upstream 100 bases:

>100_bases
TCCCATCAAATTTTAACTCCAGAAGAATTCTTCCAAGGTAATTGGAATTTTCTCCAACAACCTCTGCAACCACCAAAGCA
AACTCAACCAATTGCTAAGG

Downstream 100 bases:

>100_bases
CCAAAATTGATCAGATCCCCAACTGTGCTTAAGATTTAGGGATATGTCAAACCAATTCGCAATTCGCAATTGTAATCAGT
GGGTGCTTGAAACCCACATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MEMWRSLKLLLIISSLIKISITMTHYQKLLRVSTNGKSFHNITAKIESIVAESGVETGLCTLFLRHTSASLVIQENADPD
VLVDLANYMAKLVPESGKYIHDAEGADDMPAHIRTALTHTSENIPINRGHLVLGTWQGIYVWEHRQHSHVRELVVHISQ

Sequences:

>Translated_159_residues
MEMWRSLKLLLIISSLIKISITMTHYQKLLRVSTNGKSFHNITAKIESIVAESGVETGLCTLFLRHTSASLVIQENADPD
VLVDLANYMAKLVPESGKYIHDAEGADDMPAHIRTALTHTSENIPINRGHLVLGTWQGIYVWEHRQHSHVRELVVHISQ
>Mature_159_residues
MEMWRSLKLLLIISSLIKISITMTHYQKLLRVSTNGKSFHNITAKIESIVAESGVETGLCTLFLRHTSASLVIQENADPD
VLVDLANYMAKLVPESGKYIHDAEGADDMPAHIRTALTHTSENIPINRGHLVLGTWQGIYVWEHRQHSHVRELVVHISQ

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=131, Percent_Identity=43.5114503816794, Blast_Score=118, Evalue=2e-28,
Organism=Drosophila melanogaster, GI221476589, Length=144, Percent_Identity=36.8055555555556, Blast_Score=107, Evalue=5e-24,
Organism=Drosophila melanogaster, GI221476594, Length=144, Percent_Identity=36.8055555555556, Blast_Score=105, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 17900; Mature: 17900

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMWRSLKLLLIISSLIKISITMTHYQKLLRVSTNGKSFHNITAKIESIVAESGVETGLC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHH
TLFLRHTSASLVIQENADPDVLVDLANYMAKLVPESGKYIHDAEGADDMPAHIRTALTHT
HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHC
SENIPINRGHLVLGTWQGIYVWEHRQHSHVRELVVHISQ
CCCCCCCCCEEEEEECCEEEEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure
MEMWRSLKLLLIISSLIKISITMTHYQKLLRVSTNGKSFHNITAKIESIVAESGVETGLC
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHH
TLFLRHTSASLVIQENADPDVLVDLANYMAKLVPESGKYIHDAEGADDMPAHIRTALTHT
HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHC
SENIPINRGHLVLGTWQGIYVWEHRQHSHVRELVVHISQ
CCCCCCCCCEEEEEECCEEEEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]