| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230689
Identifier: 17230689
GI number: 17230689
Start: 3864400
End: 3864960
Strand: Reverse
Name: 17230689
Synonym: all3197
Alternate gene names: NA
Gene position: 3864960-3864400 (Counterclockwise)
Preceding gene: 17230690
Following gene: 17230688
Centisome position: 60.26
GC content: 49.73
Gene sequence:
>561_bases ATGGAAACAACAGAAACAACTTCCTCTGGTTCCTCCGCTTCCTCTCCATTTCCGAATATTCCCCCAGTGATTGAAACGGA CGATCGCGAATATCGTGATACAGGTGTCCCCAGTACAGTAGCGATCGCCGGACACCCTCTACATCCCCTCAGTGTAATTT TCCCCATAGCCTTCTTAGCAGCCGCCTTGGGTAGCGATTTCGGCTATTGGTTAACCCGCGATTACTTCTGGGCGAGGGCT TCTGTATGGTTAATTGGACTGGGTTTAGGTGGAGGTGCGATCGCCGCCGCCATAGGGTTAAGTGACTTCTTGAAAATTGA ACGTGTCCGCAAACGTAACGCAGGTTGGGCGCACCTGATCCTCAACGTCTCTCTTCTCGTTCTGTCACTAGTAAATTTCC TCCTCCGCTTAGGCGACGCTGAAGCCAGAATCCTTCCTTGGGGCTTATTAATTTCCGTAATTGTCGGTACTCTAACAAGC ATTTCCGGTTGGTTTGGTGCAGAACTCTCCTATCGCCACAAAATTGGCGTAGTTGGTGCAGGTAGTAGAAGATATCCCTA A
Upstream 100 bases:
>100_bases TGCGAGTGCAGCAATTAGCAGCAGAAACAGGCAAGCTCACCTTGCAAGCCGAAGCTTATGTAGAACAAATACCCACAGAT GAAAACTAGGATATTTAACT
Downstream 100 bases:
>100_bases ATAAAAGTCACTACTCCCACTTGAAAATTTTCAGGGCTAAAATCTTGCTATTTAGCCTGAAAAATCCCTCATCCATCAAC ACAGCTTAAAAAACACCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues METTETTSSGSSASSPFPNIPPVIETDDREYRDTGVPSTVAIAGHPLHPLSVIFPIAFLAAALGSDFGYWLTRDYFWARA SVWLIGLGLGGGAIAAAIGLSDFLKIERVRKRNAGWAHLILNVSLLVLSLVNFLLRLGDAEARILPWGLLISVIVGTLTS ISGWFGAELSYRHKIGVVGAGSRRYP
Sequences:
>Translated_186_residues METTETTSSGSSASSPFPNIPPVIETDDREYRDTGVPSTVAIAGHPLHPLSVIFPIAFLAAALGSDFGYWLTRDYFWARA SVWLIGLGLGGGAIAAAIGLSDFLKIERVRKRNAGWAHLILNVSLLVLSLVNFLLRLGDAEARILPWGLLISVIVGTLTS ISGWFGAELSYRHKIGVVGAGSRRYP >Mature_186_residues METTETTSSGSSASSPFPNIPPVIETDDREYRDTGVPSTVAIAGHPLHPLSVIFPIAFLAAALGSDFGYWLTRDYFWARA SVWLIGLGLGGGAIAAAIGLSDFLKIERVRKRNAGWAHLILNVSLLVLSLVNFLLRLGDAEARILPWGLLISVIVGTLTS ISGWFGAELSYRHKIGVVGAGSRRYP
Specific function: Unknown
COG id: COG4244
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19976; Mature: 19976
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METTETTSSGSSASSPFPNIPPVIETDDREYRDTGVPSTVAIAGHPLHPLSVIFPIAFLA CCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH AALGSDFGYWLTRDYFWARASVWLIGLGLGGGAIAAAIGLSDFLKIERVRKRNAGWAHLI HHHCCCCCHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LNVSLLVLSLVNFLLRLGDAEARILPWGLLISVIVGTLTSISGWFGAELSYRHKIGVVGA HHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCHHCCCEEECEEEEEEEC GSRRYP CCCCCC >Mature Secondary Structure METTETTSSGSSASSPFPNIPPVIETDDREYRDTGVPSTVAIAGHPLHPLSVIFPIAFLA CCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH AALGSDFGYWLTRDYFWARASVWLIGLGLGGGAIAAAIGLSDFLKIERVRKRNAGWAHLI HHHCCCCCHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LNVSLLVLSLVNFLLRLGDAEARILPWGLLISVIVGTLTSISGWFGAELSYRHKIGVVGA HHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCHHCCCEEECEEEEEEEC GSRRYP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA