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The map label for this gene is yggU [C]

Identifier: 17230688

GI number: 17230688

Start: 3863810

End: 3864037

Strand: Reverse

Name: yggU [C]

Synonym: asl3196

Alternate gene names: 17230688

Gene position: 3864037-3863810 (Counterclockwise)

Preceding gene: 17230689

Following gene: 17230686

Centisome position: 60.25

GC content: 34.65

Gene sequence:

>228_bases
ATGCAAAAAAGGGTTAAGGTTAAACCTAATTCCAAACAACAAAAAATTGCCGAGCAAGATGATGGGAGCCTAACTGTACA
TTTAAAATCCCCACCAGTAGATGGTAAAGCTAATGAAGAGTTAATCAAACTTTTAGCTGAAAAATTTGATGTGCCGAAAT
CCCACATCACAATTAAATCTGGTTTATCTTCCAAGCAAAAACTGATTGAGATTGAGACAGATATTTAG

Upstream 100 bases:

>100_bases
TCATTTTAGTCGTGTCAGTCCACTACAGTGCATCTGTATTTTCTAAAATATATTGGTATTCTTGGTTGTGCCTCACTCAA
ACAACTGAAAAACATAGATT

Downstream 100 bases:

>100_bases
TGTAAATAGGTCTAGATAAGAGATAATAAAATTTAGCTATGAGTTAGTATCGATTTTCTCCAATAAGGTAACGAATACTA
ACTCAGTAATCCAAAATACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MQKRVKVKPNSKQQKIAEQDDGSLTVHLKSPPVDGKANEELIKLLAEKFDVPKSHITIKSGLSSKQKLIEIETDI

Sequences:

>Translated_75_residues
MQKRVKVKPNSKQQKIAEQDDGSLTVHLKSPPVDGKANEELIKLLAEKFDVPKSHITIKSGLSSKQKLIEIETDI
>Mature_75_residues
MQKRVKVKPNSKQQKIAEQDDGSLTVHLKSPPVDGKANEELIKLLAEKFDVPKSHITIKSGLSSKQKLIEIETDI

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3196_NOSS1 (Q8YS95)

Other databases:

- EMBL:   BA000019
- PIR:   AE2205
- RefSeq:   NP_487236.1
- ProteinModelPortal:   Q8YS95
- SMR:   Q8YS95
- STRING:   Q8YS95
- GeneID:   1106794
- GenomeReviews:   BA000019_GR
- KEGG:   ana:asl3196
- NMPDR:   fig|103690.1.peg.3503
- eggNOG:   COG1872
- HOGENOM:   HBG472132
- OMA:   VPKSHIT
- ProtClustDB:   CLSK296663
- BioCyc:   NSP103690:ASL3196-MONOMER
- HAMAP:   MF_00634
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 8378; Mature: 8378

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRVKVKPNSKQQKIAEQDDGSLTVHLKSPPVDGKANEELIKLLAEKFDVPKSHITIKS
CCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEC
GLSSKQKLIEIETDI
CCCCCCEEEEEECCC
>Mature Secondary Structure
MQKRVKVKPNSKQQKIAEQDDGSLTVHLKSPPVDGKANEELIKLLAEKFDVPKSHITIKS
CCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEC
GLSSKQKLIEIETDI
CCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840