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The map label for this gene is yoqW [H]

Identifier: 17230686

GI number: 17230686

Start: 3862139

End: 3862840

Strand: Reverse

Name: yoqW [H]

Synonym: all3194

Alternate gene names: 17230686

Gene position: 3862840-3862139 (Counterclockwise)

Preceding gene: 17230688

Following gene: 17230685

Centisome position: 60.23

GC content: 44.02

Gene sequence:

>702_bases
ATGTGTGGAAGATTTACTTTAACCCAGTCACCAGAAGCATTAGCTGAGTTTTTTCATATCCAGCCACTCCTGGATTTAGA
AGCTCAATATAACATTGCACCTACGCAAACTGTGGTGACAGTTTTACATAACCCTGAAAGTAATAAACGTGAATTTCAAC
GATTACGCTGGGGTTTGATACCTTCATGGGCTAAAGATCCAGCGATCGCCTCGAAGCTAATCAACGCCAGAGCCGAAACT
CTTGCCGAAAAACCTTCTTTTCGTTCAGCATTTAAGCAGCGACGCTGTTTAGTAGTGGCTGATGGTTTTTTTGAATGGCA
AAAACAGCAAGGTAAAAAACAACCCTTTTATTTCCGCCTGCAACACAGTCAACCCTTTGGCTTTGCGGGATTATGGGAGA
AATGGCGAACACCTGCTGGTGAAGAAATTACCTCTTGTACAATCGTCACAACAGCAGCCAACGAACTACTGCAACCAATT
CATGACCGAATGCCAGTCATCCTCGCTCCCCAAGATTACGATTTGTGGTTAGATCCGCAAGAGCAAAAGCCCCAAGCATT
ACAACACTTATTATCCCCCTATCCAGCCTCACAAATGACCGCCTACCCAGTGAGTACCTTAGTCAATAGTCCAAAACACA
ACAACCCAGAATGTATTATCCCCATCCCAGAGCAGAATAGCTCCCCAAATCAGTTAAATTAG

Upstream 100 bases:

>100_bases
CACATATTTAGTTATTAATTATCCGAAAAAATAAAAATAATAGTATTAATTAATTCTGAATTTAAGTGTTTTATTTGATG
CAACAAGATAAAATTGAAAT

Downstream 100 bases:

>100_bases
CTTTAGGTACGGGATTAGGGGAAGCACAGACATAAGTTCCCCCACATAGCGGTACAACCATAGAAAAAAATATGCCAAGA
ACACAAAAAAACGATAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MCGRFTLTQSPEALAEFFHIQPLLDLEAQYNIAPTQTVVTVLHNPESNKREFQRLRWGLIPSWAKDPAIASKLINARAET
LAEKPSFRSAFKQRRCLVVADGFFEWQKQQGKKQPFYFRLQHSQPFGFAGLWEKWRTPAGEEITSCTIVTTAANELLQPI
HDRMPVILAPQDYDLWLDPQEQKPQALQHLLSPYPASQMTAYPVSTLVNSPKHNNPECIIPIPEQNSSPNQLN

Sequences:

>Translated_233_residues
MCGRFTLTQSPEALAEFFHIQPLLDLEAQYNIAPTQTVVTVLHNPESNKREFQRLRWGLIPSWAKDPAIASKLINARAET
LAEKPSFRSAFKQRRCLVVADGFFEWQKQQGKKQPFYFRLQHSQPFGFAGLWEKWRTPAGEEITSCTIVTTAANELLQPI
HDRMPVILAPQDYDLWLDPQEQKPQALQHLLSPYPASQMTAYPVSTLVNSPKHNNPECIIPIPEQNSSPNQLN
>Mature_233_residues
MCGRFTLTQSPEALAEFFHIQPLLDLEAQYNIAPTQTVVTVLHNPESNKREFQRLRWGLIPSWAKDPAIASKLINARAET
LAEKPSFRSAFKQRRCLVVADGFFEWQKQQGKKQPFYFRLQHSQPFGFAGLWEKWRTPAGEEITSCTIVTTAANELLQPI
HDRMPVILAPQDYDLWLDPQEQKPQALQHLLSPYPASQMTAYPVSTLVNSPKHNNPECIIPIPEQNSSPNQLN

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=231, Percent_Identity=32.9004329004329, Blast_Score=112, Evalue=3e-25,
Organism=Homo sapiens, GI54607104, Length=231, Percent_Identity=32.9004329004329, Blast_Score=112, Evalue=3e-25,
Organism=Escherichia coli, GI48994894, Length=231, Percent_Identity=34.1991341991342, Blast_Score=109, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6323761, Length=210, Percent_Identity=28.0952380952381, Blast_Score=97, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21355761, Length=252, Percent_Identity=28.1746031746032, Blast_Score=92, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 26604; Mature: 26604

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFTLTQSPEALAEFFHIQPLLDLEAQYNIAPTQTVVTVLHNPESNKREFQRLRWGLI
CCCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHCCC
PSWAKDPAIASKLINARAETLAEKPSFRSAFKQRRCLVVADGFFEWQKQQGKKQPFYFRL
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCHHHHHHHCCCCCCEEEEE
QHSQPFGFAGLWEKWRTPAGEEITSCTIVTTAANELLQPIHDRMPVILAPQDYDLWLDPQ
ECCCCCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCEEECCCCCCEEECCC
EQKPQALQHLLSPYPASQMTAYPVSTLVNSPKHNNPECIIPIPEQNSSPNQLN
CCCHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MCGRFTLTQSPEALAEFFHIQPLLDLEAQYNIAPTQTVVTVLHNPESNKREFQRLRWGLI
CCCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHCCC
PSWAKDPAIASKLINARAETLAEKPSFRSAFKQRRCLVVADGFFEWQKQQGKKQPFYFRL
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCHHHHHHHCCCCCCEEEEE
QHSQPFGFAGLWEKWRTPAGEEITSCTIVTTAANELLQPIHDRMPVILAPQDYDLWLDPQ
ECCCCCCHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCEEECCCCCCEEECCC
EQKPQALQHLLSPYPASQMTAYPVSTLVNSPKHNNPECIIPIPEQNSSPNQLN
CCCHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]