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The map label for this gene is gidB [H]

Identifier: 17230674

GI number: 17230674

Start: 3851949

End: 3852686

Strand: Direct

Name: gidB [H]

Synonym: alr3182

Alternate gene names: 17230674

Gene position: 3851949-3852686 (Clockwise)

Preceding gene: 17230670

Following gene: 17230675

Centisome position: 60.06

GC content: 42.82

Gene sequence:

>738_bases
ATGACGAACTTATTGCCAGAAATGGCTGAAATTTGGCAGCAAACTCTCAATTGGCAACCAACAGACTCTCAACAGGCGCG
ATTTCAGCAGCTTTATGAGTTAATTCTGGAAGGTAATCGCCAGTTAAACTTAACTCGCATCACTGAACCTCAAGAGTTTT
GGGAAAAACATCTTTGGGATTCGCTGCGAGGAGTTGCACCACAGCAACAATTAATCTCTTCTCTTCAACTGGGTGCATCT
GTTATTGATATTGGCACTGGTGCTGGGTTTCCTGGTGTTCCCGTGGCAATTATTGCCTCTAATTCTACAATTACGCTGGT
GGATTCAACGCGCAAAAAGATTACTTTTATCGACACTATCTTGAGCGAACTAGCTCTAACTAATGCCAAAACTCTGGTTA
GTAGGGCAGAAGAAATTGGTCAACAACCACAGCATCGAGAACAATATGATGTTGCTTTGATTCGTGCGGTCGGCACTGCT
TCGCCTTGTGCAGAATATACTTTACCTTTACTAAAGTTAGGTGGTTTGGCTGTAATTTATCGTGGTACTTGGACTGAAGA
AGAAACTACATCTGTGGAAAATGCAGCGCAGCAGTTAGGTGGCACAGTTGAATTAATAGACAACTTTACTACTCCCTTAA
CTAACAGCGTTCGCCACTGTCTTTACTTACGGAAAGTAGCTAAAACACCAGCTAATTTTCCCCGTGCTGTTGGTGTACCC
AGTCAAAAGCCTATTTAG

Upstream 100 bases:

>100_bases
CTGTTTATCAGTCAGTTGGTATTTATTTTCTTGCACCAGTTGAGGAGGCAGGGGGAAGAGATATACTGACCACTGACTAA
TGACAACTGACAACTGACTA

Downstream 100 bases:

>100_bases
GAAAGATGAACTGACTTGTCAGTGCTTGCACTATCGCTCTGACAAATAGTCCTAGAATATAAAGAAATGTATAGTTTATT
AATTTTATATGCCAGTTAAA

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTNLLPEMAEIWQQTLNWQPTDSQQARFQQLYELILEGNRQLNLTRITEPQEFWEKHLWDSLRGVAPQQQLISSLQLGAS
VIDIGTGAGFPGVPVAIIASNSTITLVDSTRKKITFIDTILSELALTNAKTLVSRAEEIGQQPQHREQYDVALIRAVGTA
SPCAEYTLPLLKLGGLAVIYRGTWTEEETTSVENAAQQLGGTVELIDNFTTPLTNSVRHCLYLRKVAKTPANFPRAVGVP
SQKPI

Sequences:

>Translated_245_residues
MTNLLPEMAEIWQQTLNWQPTDSQQARFQQLYELILEGNRQLNLTRITEPQEFWEKHLWDSLRGVAPQQQLISSLQLGAS
VIDIGTGAGFPGVPVAIIASNSTITLVDSTRKKITFIDTILSELALTNAKTLVSRAEEIGQQPQHREQYDVALIRAVGTA
SPCAEYTLPLLKLGGLAVIYRGTWTEEETTSVENAAQQLGGTVELIDNFTTPLTNSVRHCLYLRKVAKTPANFPRAVGVP
SQKPI
>Mature_244_residues
TNLLPEMAEIWQQTLNWQPTDSQQARFQQLYELILEGNRQLNLTRITEPQEFWEKHLWDSLRGVAPQQQLISSLQLGASV
IDIGTGAGFPGVPVAIIASNSTITLVDSTRKKITFIDTILSELALTNAKTLVSRAEEIGQQPQHREQYDVALIRAVGTAS
PCAEYTLPLLKLGGLAVIYRGTWTEEETTSVENAAQQLGGTVELIDNFTTPLTNSVRHCLYLRKVAKTPANFPRAVGVPS
QKPI

Specific function: Specifically methylates the N7 position of a guanosine in 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

Organism=Escherichia coli, GI1790179, Length=204, Percent_Identity=27.4509803921569, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: 2.1.-.-

Molecular weight: Translated: 27107; Mature: 26976

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLLPEMAEIWQQTLNWQPTDSQQARFQQLYELILEGNRQLNLTRITEPQEFWEKHLWD
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHH
SLRGVAPQQQLISSLQLGASVIDIGTGAGFPGVPVAIIASNSTITLVDSTRKKITFIDTI
HHHCCCCHHHHHHHHHHCCHHEEECCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHH
LSELALTNAKTLVSRAEEIGQQPQHREQYDVALIRAVGTASPCAEYTLPLLKLGGLAVIY
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEE
RGTWTEEETTSVENAAQQLGGTVELIDNFTTPLTNSVRHCLYLRKVAKTPANFPRAVGVP
ECCCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SQKPI
CCCCC
>Mature Secondary Structure 
TNLLPEMAEIWQQTLNWQPTDSQQARFQQLYELILEGNRQLNLTRITEPQEFWEKHLWD
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHH
SLRGVAPQQQLISSLQLGASVIDIGTGAGFPGVPVAIIASNSTITLVDSTRKKITFIDTI
HHHCCCCHHHHHHHHHHCCHHEEECCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHHH
LSELALTNAKTLVSRAEEIGQQPQHREQYDVALIRAVGTASPCAEYTLPLLKLGGLAVIY
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEE
RGTWTEEETTSVENAAQQLGGTVELIDNFTTPLTNSVRHCLYLRKVAKTPANFPRAVGVP
ECCCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SQKPI
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA