| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230673
Identifier: 17230673
GI number: 17230673
Start: 3850783
End: 3851751
Strand: Reverse
Name: 17230673
Synonym: all3181
Alternate gene names: NA
Gene position: 3851751-3850783 (Counterclockwise)
Preceding gene: 17230676
Following gene: 17230672
Centisome position: 60.05
GC content: 43.14
Gene sequence:
>969_bases ATGACTAACACTACCAACCAGCTAGACGATTTCGCCATCACACTACCAATTACTCAAGCAGCTCGATTTGCTGCCCAGGA GTTCGCCAACAGACAGCCTAATTCCCAAAAAGCCGAGCAAGTTAGGCTCAATACTTTGGCTGTGTCAGTGGTAAATGATT ATTTGCAAATGATGGAAGTTCCGACTAATTTGATCGCTAGTGACAGTTGGAACCCATTAATGCAGTTATGTGGAGATGTA GCTGATCTAGAAGTTCCCTCAGTTGGTCGTTTAGAGTGCCGTCCTGTTCAGATGCATGAGCAGGTATGTTCTGTTCCCCC AGAAACTTGGGACGAAAGAGTCGGTTATGTAATTGTACAGGTTGATGAAACCAATACAGAAGCTAAATTACTAGGTTTTA CTAAAAAAGTTAATCAAGAAACATTACCTCTAAATCAACTACAACCTATAGAAGCATTGATCGATCGCCTAGAGCAACTG AAAACTTCTCCTGTGGATGCTTTGGTGAATTTGAGTCAGTGGTTTGTCGGGCAGTGTGAAGCTGGTTGGCAAACAGTAGA AACTTTGTGGAACTCGCTGGAAGCTAAACCGGCTTATGGCTTTCGTAGTCCTGTAAGCACTCCAGATACAGCTTTTAATC AAGCAGAAGCCGTTACCAGACGGGCAAAACTCATTGATTTGGGGATCAAAATAGTTGACCAACCAGTGATGTTGATTGTG GAAATTGCACCTGAAGCTAACGGACAAACTAGTGTCCGTCTGCAACTACACTCCACAGGTAATCAAATACATCTACCGGC AGGAGTAAAACTGACAGTAATAGACACCTCCGGCGCAGTATTTCTAGAAGCTCAAGCCAGGAGTGCTGACAACTACCTAC AACTACAATTTCGTGGGGAAATTCAGGAACAGTTCAGCGTTCAGGTCGCATTAGATGATATGAGTATTACAGAGAGCTTT GTAATTTAA
Upstream 100 bases:
>100_bases CAGTCCTGAAAATTTCGCTGATTTTTTTGCGTTTTGTGGCATAAATTTAGTGAATGCGGGCGATATGTATATAGCAGCAT TGATCACTGGGGATTGAACT
Downstream 100 bases:
>100_bases AGCAACCAGATTTTTACTATGTAATTGGTAATAAGTAAATACCAATAAGTAACTAAATTATTTATATGTAGGAACTTCAA GTAAACTGGGCTGGAATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTNTTNQLDDFAITLPITQAARFAAQEFANRQPNSQKAEQVRLNTLAVSVVNDYLQMMEVPTNLIASDSWNPLMQLCGDV ADLEVPSVGRLECRPVQMHEQVCSVPPETWDERVGYVIVQVDETNTEAKLLGFTKKVNQETLPLNQLQPIEALIDRLEQL KTSPVDALVNLSQWFVGQCEAGWQTVETLWNSLEAKPAYGFRSPVSTPDTAFNQAEAVTRRAKLIDLGIKIVDQPVMLIV EIAPEANGQTSVRLQLHSTGNQIHLPAGVKLTVIDTSGAVFLEAQARSADNYLQLQFRGEIQEQFSVQVALDDMSITESF VI
Sequences:
>Translated_322_residues MTNTTNQLDDFAITLPITQAARFAAQEFANRQPNSQKAEQVRLNTLAVSVVNDYLQMMEVPTNLIASDSWNPLMQLCGDV ADLEVPSVGRLECRPVQMHEQVCSVPPETWDERVGYVIVQVDETNTEAKLLGFTKKVNQETLPLNQLQPIEALIDRLEQL KTSPVDALVNLSQWFVGQCEAGWQTVETLWNSLEAKPAYGFRSPVSTPDTAFNQAEAVTRRAKLIDLGIKIVDQPVMLIV EIAPEANGQTSVRLQLHSTGNQIHLPAGVKLTVIDTSGAVFLEAQARSADNYLQLQFRGEIQEQFSVQVALDDMSITESF VI >Mature_321_residues TNTTNQLDDFAITLPITQAARFAAQEFANRQPNSQKAEQVRLNTLAVSVVNDYLQMMEVPTNLIASDSWNPLMQLCGDVA DLEVPSVGRLECRPVQMHEQVCSVPPETWDERVGYVIVQVDETNTEAKLLGFTKKVNQETLPLNQLQPIEALIDRLEQLK TSPVDALVNLSQWFVGQCEAGWQTVETLWNSLEAKPAYGFRSPVSTPDTAFNQAEAVTRRAKLIDLGIKIVDQPVMLIVE IAPEANGQTSVRLQLHSTGNQIHLPAGVKLTVIDTSGAVFLEAQARSADNYLQLQFRGEIQEQFSVQVALDDMSITESFV I
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35722; Mature: 35591
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTTNQLDDFAITLPITQAARFAAQEFANRQPNSQKAEQVRLNTLAVSVVNDYLQMMEV CCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC PTNLIASDSWNPLMQLCGDVADLEVPSVGRLECRPVQMHEQVCSVPPETWDERVGYVIVQ CHHHHCCCCCCHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEE VDETNTEAKLLGFTKKVNQETLPLNQLQPIEALIDRLEQLKTSPVDALVNLSQWFVGQCE EECCCCCCCEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC AGWQTVETLWNSLEAKPAYGFRSPVSTPDTAFNQAEAVTRRAKLIDLGIKIVDQPVMLIV CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHEECCCEEEEE EIAPEANGQTSVRLQLHSTGNQIHLPAGVKLTVIDTSGAVFLEAQARSADNYLQLQFRGE EECCCCCCCEEEEEEEECCCCEEEECCCCEEEEEECCCEEEEEEECCCCCCEEEEEECCC IQEQFSVQVALDDMSITESFVI CCCCEEEEEEECCCCCCHHHCC >Mature Secondary Structure TNTTNQLDDFAITLPITQAARFAAQEFANRQPNSQKAEQVRLNTLAVSVVNDYLQMMEV CCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC PTNLIASDSWNPLMQLCGDVADLEVPSVGRLECRPVQMHEQVCSVPPETWDERVGYVIVQ CHHHHCCCCCCHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEE VDETNTEAKLLGFTKKVNQETLPLNQLQPIEALIDRLEQLKTSPVDALVNLSQWFVGQCE EECCCCCCCEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC AGWQTVETLWNSLEAKPAYGFRSPVSTPDTAFNQAEAVTRRAKLIDLGIKIVDQPVMLIV CHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHEECCCEEEEE EIAPEANGQTSVRLQLHSTGNQIHLPAGVKLTVIDTSGAVFLEAQARSADNYLQLQFRGE EECCCCCCCEEEEEEEECCCCEEEECCCCEEEEEECCCEEEEEEECCCCCCEEEEEECCC IQEQFSVQVALDDMSITESFVI CCCCEEEEEEECCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA