| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230664
Identifier: 17230664
GI number: 17230664
Start: 3841898
End: 3842299
Strand: Direct
Name: 17230664
Synonym: alr3172
Alternate gene names: NA
Gene position: 3841898-3842299 (Clockwise)
Preceding gene: 17230662
Following gene: 17230667
Centisome position: 59.9
GC content: 44.03
Gene sequence:
>402_bases ATGAGTTCAATAAGTTACTACGTTATCTATGATGGCAATTGTAATCTCTGCGTTACTTTAGTAAAATTGCTAGAAACCTT AGACCAAGGCAAGATTTTCCATTATATCCCTATGCAGGATGAGCAGGCGATCGCTCAATGGGAAATTACGCCCCAAGGTT GTGAACTAGGAGTAATTTTAATTGATGCTAAGGAGCCGCAACGACGTTGGCAAGGAAGCGACGCAGCCGAAGAAATTGGT CGTTTATTGCCCCTTGGTAGTATTTTTGTCGATGCTTATCGAGCTTTACCGGGGGTGAAATGGGTAGGCGATCGCGTTTA TGCCCAAGTCCGCGATAACCGTTATACTCTCTTTGGTCAGCGTTCTTGTACTTACCAGTCCCCTTATAGAACCGCTCAAT AA
Upstream 100 bases:
>100_bases AGTTAGTCAAAGCAATTGGCAATTTAACTGAAATTTACTGAATTAATACTATATTAAAATACTTTGTGTACTTAATACTT AAATCAATACAGAAATAGTT
Downstream 100 bases:
>100_bases GTAATTGGTAATGGGTGATTGGTAATTGTGAAGAAGACTTTACCCATTACCCTGATTAATTCATTGCCTAGCAGTAGACA ATTTCCCTAAAAGCCGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: Thiol-Disulfide Oxidoreductase DCC
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSSISYYVIYDGNCNLCVTLVKLLETLDQGKIFHYIPMQDEQAIAQWEITPQGCELGVILIDAKEPQRRWQGSDAAEEIG RLLPLGSIFVDAYRALPGVKWVGDRVYAQVRDNRYTLFGQRSCTYQSPYRTAQ
Sequences:
>Translated_133_residues MSSISYYVIYDGNCNLCVTLVKLLETLDQGKIFHYIPMQDEQAIAQWEITPQGCELGVILIDAKEPQRRWQGSDAAEEIG RLLPLGSIFVDAYRALPGVKWVGDRVYAQVRDNRYTLFGQRSCTYQSPYRTAQ >Mature_132_residues SSISYYVIYDGNCNLCVTLVKLLETLDQGKIFHYIPMQDEQAIAQWEITPQGCELGVILIDAKEPQRRWQGSDAAEEIGR LLPLGSIFVDAYRALPGVKWVGDRVYAQVRDNRYTLFGQRSCTYQSPYRTAQ
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15184; Mature: 15053
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSISYYVIYDGNCNLCVTLVKLLETLDQGKIFHYIPMQDEQAIAQWEITPQGCELGVIL CCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEE IDAKEPQRRWQGSDAAEEIGRLLPLGSIFVDAYRALPGVKWVGDRVYAQVRDNRYTLFGQ EECCCHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEECCHHEEEEECCCEEEEEEC RSCTYQSPYRTAQ CCCCCCCCCCCCC >Mature Secondary Structure SSISYYVIYDGNCNLCVTLVKLLETLDQGKIFHYIPMQDEQAIAQWEITPQGCELGVIL CCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEE IDAKEPQRRWQGSDAAEEIGRLLPLGSIFVDAYRALPGVKWVGDRVYAQVRDNRYTLFGQ EECCCHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCEECCHHEEEEECCCEEEEEEC RSCTYQSPYRTAQ CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA