| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is yvrG [H]
Identifier: 17230651
GI number: 17230651
Start: 3824423
End: 3825580
Strand: Direct
Name: yvrG [H]
Synonym: alr3159
Alternate gene names: 17230651
Gene position: 3824423-3825580 (Clockwise)
Preceding gene: 17230650
Following gene: 17230654
Centisome position: 59.63
GC content: 39.46
Gene sequence:
>1158_bases ATGGTTGGACACTCAGTCAGGATTTTATTAATTGAGGATAGCCTCGCAGAAGCCAGGTTATTACAGGAATATTTGCATCA AGCTGAGTCCAAACAATTTGTTCTGGTTCATGTGAAGCGATTACAGGAAGCACTCAATGAACTAAAACAGACCAGCTACG ATGTGATTTTGTTAGACCTCACCCTACCGGATAGCCAAGGGTTATCATCTTTACCTATATTGATAGGACGGGTTCCTAGT GTACCAATAGTTGTCTTGACAAATACTAACGATGAAGACTTAGCAATTGAAGCAGTCAGACAAGGAGCGCAAGATTATTT AGTCAAGCGACAGGTAAATGTTAATGTATTGGTTCGTGCTGTATTTTATGCAATTGAGCGTAAGCAAGCATTAGAAACAT TACGCACCATGAATACAACCCTAGAAAACCGGGTGGAAGAACGCACGGCTGAATTGGTGAAAGCGCAAGAAATCAACCAG TTTAAATCTGAGTTTGTTTCCATGCTCTCCCATGACATCCGTAATCCCCTAAATACTATTTTGTTAGCGGCTGGGTTGTT GCAAAATAACGAAGACAAATTAACTAAGGAGAAAAAACGTTCTCATTTACAAATGATTCGTTCCGCCATTAAAAATATGG CACAACTATTAGATGAAGTGTCATTAATAGGCAAAGCTGAATCAGGTAAACTCCAGTGTGAACTTATCTCTATAGATTTG GAAGCATTCTGTCGCCAATTAGTAGCAGAAGCGCAATTAACTATAGGCGAGAAGCATTTGACTGTAATTTTTACCTGCAA TAAATCATTTGACGAAGCTTTATTAGATGAAACCTTGCTGCGTCACATTTTAGGTAATGTACTAGGCAACGCCATTAAGT ATTCCCTTCCCGGCGGTATAATCCACTTTGAATTAACTGCCCAAAATAACGCAGTTATGTTTAAGATTCAAGATTGCGGA ATTGGTATTTCCCAGGAAGACCAGAAACAACTATTTCAATCATTCCATCGTGGAGAAAATGTAGGAGGAATTGCAGGTAC TGGCTTAGGACTAGCTATAGTCAAAAAATGTGTTGATGCTCACGGCGGCGAAATTATCGTCAATAGTGAGGTTGGGGTTG GTACAACGTTTACTATCATCCTGCCATTAATCAACTAA
Upstream 100 bases:
>100_bases GGAGCAGGGGAGAAAATTATTAAATTTTGAATTTTGAATTTTGAATTTTGAATTGATTACTCCCCAATCACCAATTACAA GGGGGTAAAACCAGAAAATT
Downstream 100 bases:
>100_bases TCAACATTTAAATGGGAGAGTTCATTTAATTTTCAATTGATTTAAAAAATTGCCAAATCTGTTCACTTGAGCATAGGTGA TAAATGCTCTTGGTGTTTTT
Product: two-component hybrid sensor and regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MVGHSVRILLIEDSLAEARLLQEYLHQAESKQFVLVHVKRLQEALNELKQTSYDVILLDLTLPDSQGLSSLPILIGRVPS VPIVVLTNTNDEDLAIEAVRQGAQDYLVKRQVNVNVLVRAVFYAIERKQALETLRTMNTTLENRVEERTAELVKAQEINQ FKSEFVSMLSHDIRNPLNTILLAAGLLQNNEDKLTKEKKRSHLQMIRSAIKNMAQLLDEVSLIGKAESGKLQCELISIDL EAFCRQLVAEAQLTIGEKHLTVIFTCNKSFDEALLDETLLRHILGNVLGNAIKYSLPGGIIHFELTAQNNAVMFKIQDCG IGISQEDQKQLFQSFHRGENVGGIAGTGLGLAIVKKCVDAHGGEIIVNSEVGVGTTFTIILPLIN
Sequences:
>Translated_385_residues MVGHSVRILLIEDSLAEARLLQEYLHQAESKQFVLVHVKRLQEALNELKQTSYDVILLDLTLPDSQGLSSLPILIGRVPS VPIVVLTNTNDEDLAIEAVRQGAQDYLVKRQVNVNVLVRAVFYAIERKQALETLRTMNTTLENRVEERTAELVKAQEINQ FKSEFVSMLSHDIRNPLNTILLAAGLLQNNEDKLTKEKKRSHLQMIRSAIKNMAQLLDEVSLIGKAESGKLQCELISIDL EAFCRQLVAEAQLTIGEKHLTVIFTCNKSFDEALLDETLLRHILGNVLGNAIKYSLPGGIIHFELTAQNNAVMFKIQDCG IGISQEDQKQLFQSFHRGENVGGIAGTGLGLAIVKKCVDAHGGEIIVNSEVGVGTTFTIILPLIN >Mature_385_residues MVGHSVRILLIEDSLAEARLLQEYLHQAESKQFVLVHVKRLQEALNELKQTSYDVILLDLTLPDSQGLSSLPILIGRVPS VPIVVLTNTNDEDLAIEAVRQGAQDYLVKRQVNVNVLVRAVFYAIERKQALETLRTMNTTLENRVEERTAELVKAQEINQ FKSEFVSMLSHDIRNPLNTILLAAGLLQNNEDKLTKEKKRSHLQMIRSAIKNMAQLLDEVSLIGKAESGKLQCELISIDL EAFCRQLVAEAQLTIGEKHLTVIFTCNKSFDEALLDETLLRHILGNVLGNAIKYSLPGGIIHFELTAQNNAVMFKIQDCG IGISQEDQKQLFQSFHRGENVGGIAGTGLGLAIVKKCVDAHGGEIIVNSEVGVGTTFTIILPLIN
Specific function: Member of the two-component regulatory system YvrG/YvrH that positively regulates 7 transcriptional units (wprA, wapA- yxxG, dltABCDE, sunA, sunT-bdbA-yolJ-bdbB, sigO-rsoA, and sigX- rsiX), and negatively regulates the lytABC operon. Probably activates yv
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=315, Percent_Identity=30.4761904761905, Blast_Score=109, Evalue=4e-25, Organism=Escherichia coli, GI1788713, Length=232, Percent_Identity=28.8793103448276, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI48994928, Length=226, Percent_Identity=28.7610619469027, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI145693157, Length=247, Percent_Identity=31.1740890688259, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI87081816, Length=260, Percent_Identity=29.6153846153846, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786600, Length=223, Percent_Identity=27.3542600896861, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788393, Length=226, Percent_Identity=25.2212389380531, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1786912, Length=234, Percent_Identity=28.2051282051282, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1788279, Length=224, Percent_Identity=25.8928571428571, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788549, Length=222, Percent_Identity=28.3783783783784, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1789808, Length=215, Percent_Identity=26.9767441860465, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI87082128, Length=226, Percent_Identity=25.2212389380531, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790436, Length=216, Percent_Identity=26.8518518518519, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1786783, Length=241, Percent_Identity=24.4813278008299, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790861, Length=213, Percent_Identity=24.4131455399061, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 42674; Mature: 42674
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGHSVRILLIEDSLAEARLLQEYLHQAESKQFVLVHVKRLQEALNELKQTSYDVILLDL CCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEE TLPDSQGLSSLPILIGRVPSVPIVVLTNTNDEDLAIEAVRQGAQDYLVKRQVNVNVLVRA ECCCCCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHCCCHHHHHHH VFYAIERKQALETLRTMNTTLENRVEERTAELVKAQEINQFKSEFVSMLSHDIRNPLNTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAAGLLQNNEDKLTKEKKRSHLQMIRSAIKNMAQLLDEVSLIGKAESGKLQCELISIDL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECH EAFCRQLVAEAQLTIGEKHLTVIFTCNKSFDEALLDETLLRHILGNVLGNAIKYSLPGGI HHHHHHHHHHHHHEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCE IHFELTAQNNAVMFKIQDCGIGISQEDQKQLFQSFHRGENVGGIAGTGLGLAIVKKCVDA EEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC HGGEIIVNSEVGVGTTFTIILPLIN CCCEEEEECCCCCCEEEEEEEECCC >Mature Secondary Structure MVGHSVRILLIEDSLAEARLLQEYLHQAESKQFVLVHVKRLQEALNELKQTSYDVILLDL CCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEE TLPDSQGLSSLPILIGRVPSVPIVVLTNTNDEDLAIEAVRQGAQDYLVKRQVNVNVLVRA ECCCCCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHCCCHHHHHHH VFYAIERKQALETLRTMNTTLENRVEERTAELVKAQEINQFKSEFVSMLSHDIRNPLNTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLAAGLLQNNEDKLTKEKKRSHLQMIRSAIKNMAQLLDEVSLIGKAESGKLQCELISIDL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECH EAFCRQLVAEAQLTIGEKHLTVIFTCNKSFDEALLDETLLRHILGNVLGNAIKYSLPGGI HHHHHHHHHHHHHEECCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCE IHFELTAQNNAVMFKIQDCGIGISQEDQKQLFQSFHRGENVGGIAGTGLGLAIVKKCVDA EEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC HGGEIIVNSEVGVGTTFTIILPLIN CCCEEEEECCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]