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The map label for this gene is ydiC [H]

Identifier: 17230630

GI number: 17230630

Start: 3796043

End: 3796585

Strand: Direct

Name: ydiC [H]

Synonym: alr3138

Alternate gene names: 17230630

Gene position: 3796043-3796585 (Clockwise)

Preceding gene: 17230629

Following gene: 17230631

Centisome position: 59.19

GC content: 42.17

Gene sequence:

>543_bases
GTGTGGAATTTAGGGCGAGATTTATCTAGTTATATACATCAATATTTAGTAGAATTTATCGCCCCCCAAACTTGGGCAGA
CTTGGCTTTTATTGCAGTTGCCAAAGGGCCTGGAGGTTATACGGGAACTCGTATTGGTGTTGTCCTGGCTCGCACTTTAG
GGCAACAGTTAAATATTCCTGTGTTTGCAATTTCTACCTTAGCCGCAGTGGCTTGGGCAGAAGTCGGTAAAAATCAACAA
ACAAAAGCTCTTGCAGTGGAAATGCCGGCTCAAAGAGGTCAGATTTTTGGCGCGATTTATCAGTCTTCTTTGCATGGTAA
TGAATTAACAACTTTATTACCTGATACAGTATTTACACCACAAGCATGGCAGGAGATTCTAGCTAACTGGCAAAGTGATT
ACCAGTTAGTAGAAGCCAAAGTCGATTTAGCAGCAACGGTGACAAGTATTTTGGAGCTTGCTAATTTAGAATGGCAACAA
GGTAAGCGCCCTAACTGGTCGGAAGCTTTACCGTATTATGGACAACATCCTGTAGATGTATGA

Upstream 100 bases:

>100_bases
AGAAGACCTCAAATCAACAAAATACGGTTTATCCCTCCACACTACTACCCCAGAATTGGGGCTAGCAATTAGTAACTTTG
CTGGCGAAACTCGCTCCCAA

Downstream 100 bases:

>100_bases
AGAAGGCAGGGAGCATGGAGGTTATAAAAGTAATGACTGTTAACTGTTGACTAATCATTAATTTTGAATTTTGAATTTTG
TAGCTTTAGCTTCCCGTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MWNLGRDLSSYIHQYLVEFIAPQTWADLAFIAVAKGPGGYTGTRIGVVLARTLGQQLNIPVFAISTLAAVAWAEVGKNQQ
TKALAVEMPAQRGQIFGAIYQSSLHGNELTTLLPDTVFTPQAWQEILANWQSDYQLVEAKVDLAATVTSILELANLEWQQ
GKRPNWSEALPYYGQHPVDV

Sequences:

>Translated_180_residues
MWNLGRDLSSYIHQYLVEFIAPQTWADLAFIAVAKGPGGYTGTRIGVVLARTLGQQLNIPVFAISTLAAVAWAEVGKNQQ
TKALAVEMPAQRGQIFGAIYQSSLHGNELTTLLPDTVFTPQAWQEILANWQSDYQLVEAKVDLAATVTSILELANLEWQQ
GKRPNWSEALPYYGQHPVDV
>Mature_180_residues
MWNLGRDLSSYIHQYLVEFIAPQTWADLAFIAVAKGPGGYTGTRIGVVLARTLGQQLNIPVFAISTLAAVAWAEVGKNQQ
TKALAVEMPAQRGQIFGAIYQSSLHGNELTTLLPDTVFTPQAWQEILANWQSDYQLVEAKVDLAATVTSILELANLEWQQ
GKRPNWSEALPYYGQHPVDV

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 19869; Mature: 19869

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWNLGRDLSSYIHQYLVEFIAPQTWADLAFIAVAKGPGGYTGTRIGVVLARTLGQQLNIP
CCCCHHHHHHHHHHHHHHHHCCCHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCH
VFAISTLAAVAWAEVGKNQQTKALAVEMPAQRGQIFGAIYQSSLHGNELTTLLPDTVFTP
HHHHHHHHHHHHHHHCCCCCCHHEEEECCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCH
QAWQEILANWQSDYQLVEAKVDLAATVTSILELANLEWQQGKRPNWSEALPYYGQHPVDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MWNLGRDLSSYIHQYLVEFIAPQTWADLAFIAVAKGPGGYTGTRIGVVLARTLGQQLNIP
CCCCHHHHHHHHHHHHHHHHCCCHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCH
VFAISTLAAVAWAEVGKNQQTKALAVEMPAQRGQIFGAIYQSSLHGNELTTLLPDTVFTP
HHHHHHHHHHHHHHHCCCCCCHHEEEECCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCH
QAWQEILANWQSDYQLVEAKVDLAATVTSILELANLEWQQGKRPNWSEALPYYGQHPVDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]