| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230619
Identifier: 17230619
GI number: 17230619
Start: 3786995
End: 3787903
Strand: Reverse
Name: 17230619
Synonym: all3127
Alternate gene names: NA
Gene position: 3787903-3786995 (Counterclockwise)
Preceding gene: 17230620
Following gene: 17230616
Centisome position: 59.06
GC content: 45.65
Gene sequence:
>909_bases ATGGTGAACTCTGAAGGGTTAGCTAGCACGGGTGTTCAAGCAATGAATACTGAGCAAATAGAGTTATATGAGCGAATTCA AGCATTTTCGTTAGACAAACCAGATGCTCCGTTATCATTTAGCAAACGACTGGCAAGAGATAATGGCTGGTCATTGCAGT ACGCTCGGCAAACCATTGAGGAGTACAAGAAGTTCGCTTTTTTGGCTGTAGCAGCAGGGCATCCAGTTACCCCTTCAGAC CAAGTAGACCAAGTTTGGCATCTGCATTTGACCTATACGCGATCATATTGGGAAGAGTTCTGCTCACAGGTTTTGCAAAC ACCGTTGCATCATGATCCAACTCTTGGCGGAGAGGCTGAAAATCAAAAATTTGATGATTGGTATAGCGAGACTTTGGAGA GCTACGAACGATTTTTTGAAGTAAAACCTCCATTAGAGATTTGGTCTACACCAAAGGATCGTTTTGGGCGCGATTTATAT TTTGTGCGCGTCAACACTCAACAAAATTGGGTATTGGCAAAGCTGCAAGTTCAAAAAGCAGCAACAACAAGTACCGCTAT TCTTTTCGCTTTGATATTAAGCGGTTGTTATATAGGCAATTTTGAAAACAATATCGATCCATTTACAGGGGCTATACTCG CCGTTATTTGTATTGCGGCAGCATTTGGCGTTATACGATTTCTTGTAGGGATAGTAGATTTGATGAAGAATCCTTCACTC CCTCGTATCAGAGGAGGTTGGGGCGGCAGTGGTTGTGGATCTGCTGGCTGCGGGGGTTGGGGTAGTGGATGGGGATGGGG CGATTCTAGTGGTCATAGTTCTGGTGAGTCTGATGGCAATGATGGCGGCAGTGATTGCGGAGGTGGAGGTTGCGGAGGCT GTGGAGGTGGAGGCTGTGGAGGTGAATAG
Upstream 100 bases:
>100_bases GTAGTGCTATTCATTAGACTTCAGAACTATGTCAGCTTTCGACGAATGTTAAAGGCGATGTTAAATTCTGAGTAAAGTTT ATCCAAATTCAGTAAAAAAG
Downstream 100 bases:
>100_bases CCGTATAACAATTCACTTGGAGCGAACTAAAGGAAGCCTCTGGATCTGACTCAGTAAATTAATCAGTTGCGATCGCATGA CCCTGAAGTTCATCAAGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MVNSEGLASTGVQAMNTEQIELYERIQAFSLDKPDAPLSFSKRLARDNGWSLQYARQTIEEYKKFAFLAVAAGHPVTPSD QVDQVWHLHLTYTRSYWEEFCSQVLQTPLHHDPTLGGEAENQKFDDWYSETLESYERFFEVKPPLEIWSTPKDRFGRDLY FVRVNTQQNWVLAKLQVQKAATTSTAILFALILSGCYIGNFENNIDPFTGAILAVICIAAAFGVIRFLVGIVDLMKNPSL PRIRGGWGGSGCGSAGCGGWGSGWGWGDSSGHSSGESDGNDGGSDCGGGGCGGCGGGGCGGE
Sequences:
>Translated_302_residues MVNSEGLASTGVQAMNTEQIELYERIQAFSLDKPDAPLSFSKRLARDNGWSLQYARQTIEEYKKFAFLAVAAGHPVTPSD QVDQVWHLHLTYTRSYWEEFCSQVLQTPLHHDPTLGGEAENQKFDDWYSETLESYERFFEVKPPLEIWSTPKDRFGRDLY FVRVNTQQNWVLAKLQVQKAATTSTAILFALILSGCYIGNFENNIDPFTGAILAVICIAAAFGVIRFLVGIVDLMKNPSL PRIRGGWGGSGCGSAGCGGWGSGWGWGDSSGHSSGESDGNDGGSDCGGGGCGGCGGGGCGGE >Mature_302_residues MVNSEGLASTGVQAMNTEQIELYERIQAFSLDKPDAPLSFSKRLARDNGWSLQYARQTIEEYKKFAFLAVAAGHPVTPSD QVDQVWHLHLTYTRSYWEEFCSQVLQTPLHHDPTLGGEAENQKFDDWYSETLESYERFFEVKPPLEIWSTPKDRFGRDLY FVRVNTQQNWVLAKLQVQKAATTSTAILFALILSGCYIGNFENNIDPFTGAILAVICIAAAFGVIRFLVGIVDLMKNPSL PRIRGGWGGSGCGSAGCGGWGSGWGWGDSSGHSSGESDGNDGGSDCGGGGCGGCGGGGCGGE
Specific function: Unknown
COG id: COG4278
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32690; Mature: 32690
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00197 2FE2S_FER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNSEGLASTGVQAMNTEQIELYERIQAFSLDKPDAPLSFSKRLARDNGWSLQYARQTIE CCCCCCCHHHCCHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH EYKKFAFLAVAAGHPVTPSDQVDQVWHLHLTYTRSYWEEFCSQVLQTPLHHDPTLGGEAE HHHHHHHHEEECCCCCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC NQKFDDWYSETLESYERFFEVKPPLEIWSTPKDRFGRDLYFVRVNTQQNWVLAKLQVQKA CCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCCEEEEEEECCCCCEEEEEEHHHHH ATTSTAILFALILSGCYIGNFENNIDPFTGAILAVICIAAAFGVIRFLVGIVDLMKNPSL HHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PRIRGGWGGSGCGSAGCGGWGSGWGWGDSSGHSSGESDGNDGGSDCGGGGCGGCGGGGCG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GE CC >Mature Secondary Structure MVNSEGLASTGVQAMNTEQIELYERIQAFSLDKPDAPLSFSKRLARDNGWSLQYARQTIE CCCCCCCHHHCCHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH EYKKFAFLAVAAGHPVTPSDQVDQVWHLHLTYTRSYWEEFCSQVLQTPLHHDPTLGGEAE HHHHHHHHEEECCCCCCCCHHHHHEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC NQKFDDWYSETLESYERFFEVKPPLEIWSTPKDRFGRDLYFVRVNTQQNWVLAKLQVQKA CCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHCCCEEEEEEECCCCCEEEEEEHHHHH ATTSTAILFALILSGCYIGNFENNIDPFTGAILAVICIAAAFGVIRFLVGIVDLMKNPSL HHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PRIRGGWGGSGCGSAGCGGWGSGWGWGDSSGHSSGESDGNDGGSDCGGGGCGGCGGGGCG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA