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The map label for this gene is yjcF [C]

Identifier: 17230606

GI number: 17230606

Start: 3764872

End: 3766602

Strand: Reverse

Name: yjcF [C]

Synonym: all3114

Alternate gene names: 17230606

Gene position: 3766602-3764872 (Counterclockwise)

Preceding gene: 17230608

Following gene: 17230605

Centisome position: 58.73

GC content: 46.62

Gene sequence:

>1731_bases
ATGGATAAAAAAATGTCAGAACTACCTCATGTTTGGAAACTCTTACAGAATTATGTTCGGGGTACAAGGTCAACAGATAG
GCCTACAACAAAGTATGTAGGTAGTCGCTCATTTTTACCTCTGGGAAAACACCAACAAAAACCAGCCAAAGATGTAAACT
TTTCTCAAGTTAATTTACAGAAAGAAATTTTATGTGAAAGATTACAAATCAGTTTAGAGGCATGGACAAGAGAGGATGGT
AAGGGGAAATTTTCCACTAGCAATAGCCAACTCCAACAAGAGATTTATGATTTACTCGGTAATGGTGCATTAAACTCAGA
AATAGTCGAAAAAGTCATAGAATTGCTTATCCTGGAAGCACAATTTCGCCCAGGGTTGCTATTTCACCGTCTAGAAGATT
TTTATCAACGTTGGTGTCGAGGAGAATTTATTGATGCGCCACCAAGCGAGAACTTACCTCAGCGAAAATTGATGGAGATG
GCAGCACAGAATCAAGCCATGGGACTGAGGCAGATTGATATTTACGCTGGGCTTAATGTCTTAATTTTACTTCTAGAATT
ACACCGCTACGCCCAACAGCAAGAAGAACTGCGGCAACAAATCAACTTTTATCCTTCTTCCCCACCAGATACAGACAGCT
TTTTTACCTCCCAACTACTGCGGGTAATTAATTATAGCGATGCCATAGAAATTGGCAACTTTAGTAATATCGTAGGGGAA
TTTCTCCGAGGTGGTAACTTTCAAGGTGCATACTTGGGAAATGCCAACTTGACAGGAGTTAACTTTAGTGGTGCTAACCT
CAGTGGCGCATACCTTGGTGATGCCAACCTTACAGGCGCAAACTTCCAAGACGCTAACCTCACAGGTGCAGACTTTGGTG
ATGCCAACCTCAGCAGTGTTAATCTCAGTGGTGCCAACTTGAGTAGCGCCGACCTCAGCAGCGCCAACCTTACGGGTGCA
AACCTAAGCGGTGCTAACTTGCAACGTGCCGACCTCAGTCGTGCTGACCTGAGTAGTTCCATCCTCAACGATGGCGAATT
TAGCCACGCCAACCTCAGTGGTGTCAACCTCAGAGATGCTGAACTCCGTCGCGCCAACCTCAGCAACGCCATCTTATTTG
GTGCTAACCTCAGTGATGCCAACCTCAATCACGCCGACCTCAGTCGCGCCGACCTTTGTCGTGCAGACTTGAGTGGTGCA
GACCTCACACACGCCACCCTCAACGGTACTAACCTCAGCGATACCATTCTTTTTAGTACTAACTTAAGTGATGCCATTCT
GGAAGCAGCTGACCTCAGTTATGCCAAACTCAACGGTGCTAAACTCAACTACGCCAGACTCAACGGCGCTATGTTTTTAG
GTGCAGACCTCAGTGGCGTAGATTTAACTGGCGTAGTTCTCAATGATGCCGATTTGAGTGGCGGGATTCTCAGCGAAGCC
GACCTCACAGGCGCAGACCTCAGCGATGCCATACTCTTGGGTACTGACTTCAGCTTTGCCAACCTCAACAGTGCCAACCT
GAGTGGTAGTAACTTGAGTGGCGCAATTTTGAATGGTGCAGACCTCAGTAGCGCCAACCTCAGTTATGCCATTCTCGACG
ATACAGACATAAGTGAAGCCAACCTAGAAGAGATGACCTGGGGAGAAATTCAGCAATGGGAAGGCGTGCGAGGTTTGGAG
ACAGCGCTGAATCTACCGGAGGCGTTGCGGGAAAAGTTGGGGAAGAGGTAA

Upstream 100 bases:

>100_bases
TTTTAAATACTTGGATTTATTTTATACTAAATTTTCATGCTTTCACAACACCGAAGCATTGAATTTATCTATATATTTCT
ACTTTGGCAATTTATTATTA

Downstream 100 bases:

>100_bases
ATTTGATCTCTGTACAGAACAAAAAATTGAGGAAAAGCTTGCAAAGTTTACAGGGAAGGGGTAGTTACCACAGAAACCCC
TATGAACCAGATTAACCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 576

Protein sequence:

>576_residues
MDKKMSELPHVWKLLQNYVRGTRSTDRPTTKYVGSRSFLPLGKHQQKPAKDVNFSQVNLQKEILCERLQISLEAWTREDG
KGKFSTSNSQLQQEIYDLLGNGALNSEIVEKVIELLILEAQFRPGLLFHRLEDFYQRWCRGEFIDAPPSENLPQRKLMEM
AAQNQAMGLRQIDIYAGLNVLILLLELHRYAQQQEELRQQINFYPSSPPDTDSFFTSQLLRVINYSDAIEIGNFSNIVGE
FLRGGNFQGAYLGNANLTGVNFSGANLSGAYLGDANLTGANFQDANLTGADFGDANLSSVNLSGANLSSADLSSANLTGA
NLSGANLQRADLSRADLSSSILNDGEFSHANLSGVNLRDAELRRANLSNAILFGANLSDANLNHADLSRADLCRADLSGA
DLTHATLNGTNLSDTILFSTNLSDAILEAADLSYAKLNGAKLNYARLNGAMFLGADLSGVDLTGVVLNDADLSGGILSEA
DLTGADLSDAILLGTDFSFANLNSANLSGSNLSGAILNGADLSSANLSYAILDDTDISEANLEEMTWGEIQQWEGVRGLE
TALNLPEALREKLGKR

Sequences:

>Translated_576_residues
MDKKMSELPHVWKLLQNYVRGTRSTDRPTTKYVGSRSFLPLGKHQQKPAKDVNFSQVNLQKEILCERLQISLEAWTREDG
KGKFSTSNSQLQQEIYDLLGNGALNSEIVEKVIELLILEAQFRPGLLFHRLEDFYQRWCRGEFIDAPPSENLPQRKLMEM
AAQNQAMGLRQIDIYAGLNVLILLLELHRYAQQQEELRQQINFYPSSPPDTDSFFTSQLLRVINYSDAIEIGNFSNIVGE
FLRGGNFQGAYLGNANLTGVNFSGANLSGAYLGDANLTGANFQDANLTGADFGDANLSSVNLSGANLSSADLSSANLTGA
NLSGANLQRADLSRADLSSSILNDGEFSHANLSGVNLRDAELRRANLSNAILFGANLSDANLNHADLSRADLCRADLSGA
DLTHATLNGTNLSDTILFSTNLSDAILEAADLSYAKLNGAKLNYARLNGAMFLGADLSGVDLTGVVLNDADLSGGILSEA
DLTGADLSDAILLGTDFSFANLNSANLSGSNLSGAILNGADLSSANLSYAILDDTDISEANLEEMTWGEIQQWEGVRGLE
TALNLPEALREKLGKR
>Mature_576_residues
MDKKMSELPHVWKLLQNYVRGTRSTDRPTTKYVGSRSFLPLGKHQQKPAKDVNFSQVNLQKEILCERLQISLEAWTREDG
KGKFSTSNSQLQQEIYDLLGNGALNSEIVEKVIELLILEAQFRPGLLFHRLEDFYQRWCRGEFIDAPPSENLPQRKLMEM
AAQNQAMGLRQIDIYAGLNVLILLLELHRYAQQQEELRQQINFYPSSPPDTDSFFTSQLLRVINYSDAIEIGNFSNIVGE
FLRGGNFQGAYLGNANLTGVNFSGANLSGAYLGDANLTGANFQDANLTGADFGDANLSSVNLSGANLSSADLSSANLTGA
NLSGANLQRADLSRADLSSSILNDGEFSHANLSGVNLRDAELRRANLSNAILFGANLSDANLNHADLSRADLCRADLSGA
DLTHATLNGTNLSDTILFSTNLSDAILEAADLSYAKLNGAKLNYARLNGAMFLGADLSGVDLTGVVLNDADLSGGILSEA
DLTGADLSDAILLGTDFSFANLNSANLSGSNLSGAILNGADLSSANLSYAILDDTDISEANLEEMTWGEIQQWEGVRGLE
TALNLPEALREKLGKR

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=165, Percent_Identity=36.3636363636364, Blast_Score=83, Evalue=6e-16,
Organism=Escherichia coli, GI1790502, Length=268, Percent_Identity=24.6268656716418, Blast_Score=69, Evalue=6e-13,
Organism=Drosophila melanogaster, GI221377802, Length=176, Percent_Identity=35.7954545454545, Blast_Score=85, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 62344; Mature: 62344

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKMSELPHVWKLLQNYVRGTRSTDRPTTKYVGSRSFLPLGKHQQKPAKDVNFSQVNLQ
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
KEILCERLQISLEAWTREDGKGKFSTSNSQLQQEIYDLLGNGALNSEIVEKVIELLILEA
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
QFRPGLLFHRLEDFYQRWCRGEFIDAPPSENLPQRKLMEMAAQNQAMGLRQIDIYAGLNV
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHH
LILLLELHRYAQQQEELRQQINFYPSSPPDTDSFFTSQLLRVINYSDAIEIGNFSNIVGE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHH
FLRGGNFQGAYLGNANLTGVNFSGANLSGAYLGDANLTGANFQDANLTGADFGDANLSSV
HHHCCCCCEEEECCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEE
NLSGANLSSADLSSANLTGANLSGANLQRADLSRADLSSSILNDGEFSHANLSGVNLRDA
ECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHH
ELRRANLSNAILFGANLSDANLNHADLSRADLCRADLSGADLTHATLNGTNLSDTILFST
HHHHHCCCCEEEEECCCCCCCCCHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEC
NLSDAILEAADLSYAKLNGAKLNYARLNGAMFLGADLSGVDLTGVVLNDADLSGGILSEA
CCHHHHHHHHCCCCEECCCCEEEEEEECCEEEECCCCCCCEEEEEEEECCCCCCCCCCCC
DLTGADLSDAILLGTDFSFANLNSANLSGSNLSGAILNGADLSSANLSYAILDDTDISEA
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCC
NLEEMTWGEIQQWEGVRGLETALNLPEALREKLGKR
CHHHCCHHHHHHHCCCHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MDKKMSELPHVWKLLQNYVRGTRSTDRPTTKYVGSRSFLPLGKHQQKPAKDVNFSQVNLQ
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH
KEILCERLQISLEAWTREDGKGKFSTSNSQLQQEIYDLLGNGALNSEIVEKVIELLILEA
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
QFRPGLLFHRLEDFYQRWCRGEFIDAPPSENLPQRKLMEMAAQNQAMGLRQIDIYAGLNV
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHH
LILLLELHRYAQQQEELRQQINFYPSSPPDTDSFFTSQLLRVINYSDAIEIGNFSNIVGE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHH
FLRGGNFQGAYLGNANLTGVNFSGANLSGAYLGDANLTGANFQDANLTGADFGDANLSSV
HHHCCCCCEEEECCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEE
NLSGANLSSADLSSANLTGANLSGANLQRADLSRADLSSSILNDGEFSHANLSGVNLRDA
ECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHH
ELRRANLSNAILFGANLSDANLNHADLSRADLCRADLSGADLTHATLNGTNLSDTILFST
HHHHHCCCCEEEEECCCCCCCCCHHHCCHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEC
NLSDAILEAADLSYAKLNGAKLNYARLNGAMFLGADLSGVDLTGVVLNDADLSGGILSEA
CCHHHHHHHHCCCCEECCCCEEEEEEECCEEEECCCCCCCEEEEEEEECCCCCCCCCCCC
DLTGADLSDAILLGTDFSFANLNSANLSGSNLSGAILNGADLSSANLSYAILDDTDISEA
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCCCCC
NLEEMTWGEIQQWEGVRGLETALNLPEALREKLGKR
CHHHCCHHHHHHHCCCHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]