| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230598
Identifier: 17230598
GI number: 17230598
Start: 3758745
End: 3759104
Strand: Direct
Name: 17230598
Synonym: alr3106
Alternate gene names: NA
Gene position: 3758745-3759104 (Clockwise)
Preceding gene: 17230597
Following gene: 17230601
Centisome position: 58.6
GC content: 37.78
Gene sequence:
>360_bases ATGGCAGGTAGTTTTAATATTAATACTGGCGGTGGTCAATTTAATCAAAATATTGGACGTGATTTGATCCAAGGTGATTA CTATGCGGCAGCACAGCCCCAAAGCCTTGCTGAAACTGCTGCTGAAATTCAACAGTTACTAAAACAATTAGAGCAAACAT ACCCGACTACAACTAGAGCAGAACAAAGGAGAGTAGCTACAGAAGCTATAAATCAAATTGAAAGTAATCCTGCATTTAAA GAGCGAATAATTAAAGCTGTCCAGTATGGTAGTTTAGCAGCTTTTGAAAAAGCTATTGATAATCCGCTTGGAGCATTCAT CACTGAAGCAATCAAAGGTTGGCAAGAATTTGAAAGCTAA
Upstream 100 bases:
>100_bases ATTTACTTATAAAATATATATTTTTAGTGAAAACTTACATAAAAGTTACCTGCATATAATTACAATGTAGATAATAATCT TAATTATCAGGAGCTAAAAA
Downstream 100 bases:
>100_bases TAACGTTATTTTCTAGCTAATCAATACAAGCGAAAAAATACCTCCTATAAATTAAACTAGGAGGTTTATAAATTATTGAT GTGTTATTAGTTATTTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MAGSFNINTGGGQFNQNIGRDLIQGDYYAAAQPQSLAETAAEIQQLLKQLEQTYPTTTRAEQRRVATEAINQIESNPAFK ERIIKAVQYGSLAAFEKAIDNPLGAFITEAIKGWQEFES
Sequences:
>Translated_119_residues MAGSFNINTGGGQFNQNIGRDLIQGDYYAAAQPQSLAETAAEIQQLLKQLEQTYPTTTRAEQRRVATEAINQIESNPAFK ERIIKAVQYGSLAAFEKAIDNPLGAFITEAIKGWQEFES >Mature_118_residues AGSFNINTGGGQFNQNIGRDLIQGDYYAAAQPQSLAETAAEIQQLLKQLEQTYPTTTRAEQRRVATEAINQIESNPAFKE RIIKAVQYGSLAAFEKAIDNPLGAFITEAIKGWQEFES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13113; Mature: 12982
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSFNINTGGGQFNQNIGRDLIQGDYYAAAQPQSLAETAAEIQQLLKQLEQTYPTTTRA CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH EQRRVATEAINQIESNPAFKERIIKAVQYGSLAAFEKAIDNPLGAFITEAIKGWQEFES HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AGSFNINTGGGQFNQNIGRDLIQGDYYAAAQPQSLAETAAEIQQLLKQLEQTYPTTTRA CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH EQRRVATEAINQIESNPAFKERIIKAVQYGSLAAFEKAIDNPLGAFITEAIKGWQEFES HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA