| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is yafE [C]
Identifier: 17230587
GI number: 17230587
Start: 3747036
End: 3748004
Strand: Direct
Name: yafE [C]
Synonym: alr3095
Alternate gene names: 17230587
Gene position: 3747036-3748004 (Clockwise)
Preceding gene: 17230584
Following gene: 17230588
Centisome position: 58.42
GC content: 45.3
Gene sequence:
>969_bases ATGACCTATTTAGAAACAGCCGCACAATTTTATAGCGAAGTTGCCCAAACGCCGCAAGTGGGGCTGTGTTGTGTTCAAAG TACACCTCTACAACTACCAGGGCTGAAAATTCCTTTACCCATGCAGGAGATGAACTATGGTTGTGGAACCACTGTTCATC CTACGGAACTTGGCAAGCAACCTACCGTCTTGTATGTTGGTGTGGGTGGTGGGTTAGAAGCATTGCAATTTGCTTATTTT TCTCGTCGCCCTGGTGCTGTGATTGCAGTTGAACCAGTTGCCGCGATGCGAGAAGCAGCAGCACGCAACCTAGAAATGGC TTTAACAGACAACCCTTGGTTTGACAGCAGTTTTGTAGAGATTCGTGAAGGAGATGCCTTTAATTTACCTGTGGCTGATG GGTCAGTTGATATCGTCGCTCAAAATTGTTTGTTTAATATTTTCGAGCCTGAAGATTTGACCCGTGCGTTAAAGGAAGCG TATCGGGTGTTAAAGCCTGGTGGACGGTTGCAAATGAGTGACCCTATTGCCACCAGTCCCGTCCCTGCACATTTGCAACA AGATGAACGGTTGCGCGCTATGTGTTTGTCTGGCGCACTTACCTACGAAGAATACACCCAGCGTATCATTGATGCAGGCT TTGGTCAGATTGAAATTCGGGCGCGTCGTCCTTATCGCTTACTAGATTCCCAAACTTATAACTTAGAAACGCATTTACTT TTAGAAAGTCTCGATTCCGTCTCATTCAAAGTGCCTATGCCAGAAGATGGCGCTTGCATTTTTACTGGTAGAACTGCAAT TTATGCCGGTTGTGACGCATTTTTTGATGACAAAGCCGGACATATCCTACAACGTGGCATTCCGGCAACCGTATGCGATA AAACTGCTGCTAAACTAGCAACTGTAAAGCCAAAAGAAGTAATAATTACTGATTCTACTTGGCATTATAACGGTGGTGGT TGCTGTTAA
Upstream 100 bases:
>100_bases TTGAAATTCATTCCCCTGCCCCTTACGCCTCTCCCTCCTGCTATATATTGAGAATGCAGAGAATCAACTCTACAACCCTA CACTCAATATCAAGACCGCG
Downstream 100 bases:
>100_bases TTTATACTCCTGAAAATGTTGTTAATTAGTCTATTTATTGCTACCCTGTTCCTGGCTTATGCTAATGGAGCTAATGACAA TTTTAAGGGTGTAGCTACGC
Product: hypothetical protein
Products: NA
Alternate protein names: Arsenite S-Adenosylmethyltransferase; Methyltransferase; Arsenite Methyltransferase; SAM-Dependent Methyltransferase; Methyltransferase Domain Family; Methyltransferase-Like; UbiE/COQ5 Family Methlytransferase; UbiE/COQ5 Methyltransferase; Arsenic Methyltransferase; 2-Heptaprenyl-1 4-Naphthoquinone Methyltransferase; Protein Containing Methyltransferase Domain; ArsR Family Transcriptional Regulator; SAM-Dependent Methyltransferases; Cyclopropane-Fatty-Acyl-Phospholipid Synthase; Methyltransferase UbiE-Family; Radical SAM Domain-Containing Protein; Transcriptional Regulator ArsR Family
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTYLETAAQFYSEVAQTPQVGLCCVQSTPLQLPGLKIPLPMQEMNYGCGTTVHPTELGKQPTVLYVGVGGGLEALQFAYF SRRPGAVIAVEPVAAMREAAARNLEMALTDNPWFDSSFVEIREGDAFNLPVADGSVDIVAQNCLFNIFEPEDLTRALKEA YRVLKPGGRLQMSDPIATSPVPAHLQQDERLRAMCLSGALTYEEYTQRIIDAGFGQIEIRARRPYRLLDSQTYNLETHLL LESLDSVSFKVPMPEDGACIFTGRTAIYAGCDAFFDDKAGHILQRGIPATVCDKTAAKLATVKPKEVIITDSTWHYNGGG CC
Sequences:
>Translated_322_residues MTYLETAAQFYSEVAQTPQVGLCCVQSTPLQLPGLKIPLPMQEMNYGCGTTVHPTELGKQPTVLYVGVGGGLEALQFAYF SRRPGAVIAVEPVAAMREAAARNLEMALTDNPWFDSSFVEIREGDAFNLPVADGSVDIVAQNCLFNIFEPEDLTRALKEA YRVLKPGGRLQMSDPIATSPVPAHLQQDERLRAMCLSGALTYEEYTQRIIDAGFGQIEIRARRPYRLLDSQTYNLETHLL LESLDSVSFKVPMPEDGACIFTGRTAIYAGCDAFFDDKAGHILQRGIPATVCDKTAAKLATVKPKEVIITDSTWHYNGGG CC >Mature_321_residues TYLETAAQFYSEVAQTPQVGLCCVQSTPLQLPGLKIPLPMQEMNYGCGTTVHPTELGKQPTVLYVGVGGGLEALQFAYFS RRPGAVIAVEPVAAMREAAARNLEMALTDNPWFDSSFVEIREGDAFNLPVADGSVDIVAQNCLFNIFEPEDLTRALKEAY RVLKPGGRLQMSDPIATSPVPAHLQQDERLRAMCLSGALTYEEYTQRIIDAGFGQIEIRARRPYRLLDSQTYNLETHLLL ESLDSVSFKVPMPEDGACIFTGRTAIYAGCDAFFDDKAGHILQRGIPATVCDKTAAKLATVKPKEVIITDSTWHYNGGGC C
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35252; Mature: 35120
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYLETAAQFYSEVAQTPQVGLCCVQSTPLQLPGLKIPLPMQEMNYGCGTTVHPTELGKQ CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEECCCCHHHCCCCCCCCCCHHHCCCC PTVLYVGVGGGLEALQFAYFSRRPGAVIAVEPVAAMREAAARNLEMALTDNPWFDSSFVE CCEEEEECCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCEEEEECCCCCCCCCEEE IREGDAFNLPVADGSVDIVAQNCLFNIFEPEDLTRALKEAYRVLKPGGRLQMSDPIATSP EECCCEEECEECCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC VPAHLQQDERLRAMCLSGALTYEEYTQRIIDAGFGQIEIRARRPYRLLDSQTYNLETHLL CCHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCHHHHHH LESLDSVSFKVPMPEDGACIFTGRTAIYAGCDAFFDDKAGHILQRGIPATVCDKTAAKLA HHHHCCCEEECCCCCCCCEEEECCEEEEECCCHHCCCCCCHHHHCCCCHHHHHHHHHHHE TVKPKEVIITDSTWHYNGGGCC ECCCCEEEEECCCEEECCCCCC >Mature Secondary Structure TYLETAAQFYSEVAQTPQVGLCCVQSTPLQLPGLKIPLPMQEMNYGCGTTVHPTELGKQ CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEECCCCHHHCCCCCCCCCCHHHCCCC PTVLYVGVGGGLEALQFAYFSRRPGAVIAVEPVAAMREAAARNLEMALTDNPWFDSSFVE CCEEEEECCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCEEEEECCCCCCCCCEEE IREGDAFNLPVADGSVDIVAQNCLFNIFEPEDLTRALKEAYRVLKPGGRLQMSDPIATSP EECCCEEECEECCCCCEEEEECCEEEECCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC VPAHLQQDERLRAMCLSGALTYEEYTQRIIDAGFGQIEIRARRPYRLLDSQTYNLETHLL CCHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCHHHHHH LESLDSVSFKVPMPEDGACIFTGRTAIYAGCDAFFDDKAGHILQRGIPATVCDKTAAKLA HHHHCCCEEECCCCCCCCEEEECCEEEEECCCHHCCCCCCHHHHCCCCHHHHHHHHHHHE TVKPKEVIITDSTWHYNGGGCC ECCCCEEEEECCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA