| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230583
Identifier: 17230583
GI number: 17230583
Start: 3739240
End: 3739968
Strand: Direct
Name: 17230583
Synonym: alr3091
Alternate gene names: NA
Gene position: 3739240-3739968 (Clockwise)
Preceding gene: 17230582
Following gene: 17230584
Centisome position: 58.3
GC content: 43.07
Gene sequence:
>729_bases GTGATTGTGAATGCAACACCAACCGGATGGGAAGTGATTTATCATCGTTCCCACGCTTTGTTAGCAGCGCAAATAGCAGG ACAATGGCAACGAAAAAACGCTCCAGCTAGAATATACGAAACCTTAGCCGCAATTTCTCATCATGATGATTTAGAGAAAG AATGGGAGGAAAATAATTTGACTCAAGCAGGCGCGCCAATGGATTTCATGATGAACAAAGAAGCTTCTGTGGAAAAACTG GCGAGTCTCATTAAAAATGCTCGTTACCGGGGACGATGGGTAACTTTATTAATTTCTATGCACATTAGCCGCTTGACGGA ACCAAAACGGGGACAGTCGGCTGAATTAGATGCTTTTTTAGATGAACAAATAGAGAATCAACGGCGTTGGCGTGAAGAAC TGGGGATAGAAAAAGATGAAGTAGATGCAGCTTATGCTTTCATGCAGTGGTGCGATCGCCTGTCTCTCATCTTATGCCAA AAAGAACTACCTGCGGATGAACGGTTTTTAGAAATTAGTAAAGGCCCCGACGGTCAACGCTATGACATCATGCAACGTAG CGATAATTTAGTCACAGTCAAACCTTGGCCTTTTGAAGACGATAAGTTTACGGTTAATGTCGAAGCTTGCGACTTACAAC AGGCCAAATTTGCGAGTAACAGCAAACTAACTCAAGCACTACAAACCGCCCCAATCAAGGTGCTAGAGTGGACTTTCGTT AAAAAGTAA
Upstream 100 bases:
>100_bases AATCCTGCTTTATCTTAACGATAATTATTTCTGTTGACCTACTTATATTTGATAAGAATTTATTTGAAAAATCACAATTT AAACTTTAGGAGATGAATTT
Downstream 100 bases:
>100_bases CAATTTGCCAATAATTAAAAAGCATCTGGGAGTGTTGCCGTGTTTCCACCCCAGATGCTTTTTAGTTTCAACTTGCTCCT CACACAACTAGAGGATATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MIVNATPTGWEVIYHRSHALLAAQIAGQWQRKNAPARIYETLAAISHHDDLEKEWEENNLTQAGAPMDFMMNKEASVEKL ASLIKNARYRGRWVTLLISMHISRLTEPKRGQSAELDAFLDEQIENQRRWREELGIEKDEVDAAYAFMQWCDRLSLILCQ KELPADERFLEISKGPDGQRYDIMQRSDNLVTVKPWPFEDDKFTVNVEACDLQQAKFASNSKLTQALQTAPIKVLEWTFV KK
Sequences:
>Translated_242_residues MIVNATPTGWEVIYHRSHALLAAQIAGQWQRKNAPARIYETLAAISHHDDLEKEWEENNLTQAGAPMDFMMNKEASVEKL ASLIKNARYRGRWVTLLISMHISRLTEPKRGQSAELDAFLDEQIENQRRWREELGIEKDEVDAAYAFMQWCDRLSLILCQ KELPADERFLEISKGPDGQRYDIMQRSDNLVTVKPWPFEDDKFTVNVEACDLQQAKFASNSKLTQALQTAPIKVLEWTFV KK >Mature_242_residues MIVNATPTGWEVIYHRSHALLAAQIAGQWQRKNAPARIYETLAAISHHDDLEKEWEENNLTQAGAPMDFMMNKEASVEKL ASLIKNARYRGRWVTLLISMHISRLTEPKRGQSAELDAFLDEQIENQRRWREELGIEKDEVDAAYAFMQWCDRLSLILCQ KELPADERFLEISKGPDGQRYDIMQRSDNLVTVKPWPFEDDKFTVNVEACDLQQAKFASNSKLTQALQTAPIKVLEWTFV KK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27980; Mature: 27980
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVNATPTGWEVIYHRSHALLAAQIAGQWQRKNAPARIYETLAAISHHDDLEKEWEENNL CEECCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCC TQAGAPMDFMMNKEASVEKLASLIKNARYRGRWVTLLISMHISRLTEPKRGQSAELDAFL CCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH DEQIENQRRWREELGIEKDEVDAAYAFMQWCDRLSLILCQKELPADERFLEISKGPDGQR HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCE YDIMQRSDNLVTVKPWPFEDDKFTVNVEACDLQQAKFASNSKLTQALQTAPIKVLEWTFV EHHEECCCCEEEECCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHCCCEEEEEEEC KK CC >Mature Secondary Structure MIVNATPTGWEVIYHRSHALLAAQIAGQWQRKNAPARIYETLAAISHHDDLEKEWEENNL CEECCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCC TQAGAPMDFMMNKEASVEKLASLIKNARYRGRWVTLLISMHISRLTEPKRGQSAELDAFL CCCCCCHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH DEQIENQRRWREELGIEKDEVDAAYAFMQWCDRLSLILCQKELPADERFLEISKGPDGQR HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCE YDIMQRSDNLVTVKPWPFEDDKFTVNVEACDLQQAKFASNSKLTQALQTAPIKVLEWTFV EHHEECCCCEEEECCCCCCCCCEEEEEECCCCHHHHHCCCHHHHHHHHHCCCEEEEEEEC KK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA