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The map label for this gene is yibD [C]

Identifier: 17230563

GI number: 17230563

Start: 3720982

End: 3721938

Strand: Direct

Name: yibD [C]

Synonym: alr3071

Alternate gene names: 17230563

Gene position: 3720982-3721938 (Clockwise)

Preceding gene: 17230562

Following gene: 17230564

Centisome position: 58.02

GC content: 40.96

Gene sequence:

>957_bases
ATGCCAAAAGTATCCGTCGTTATTCCCGCTTATAATGCAATGAAATACCTCCCCGCTACAGTGGAGAGTGTCTTACAACA
AAGCTTTACCGATATAGAAATTTTAATTATTAATGATGGTAGTTCAGACAATATTATTGCCTGGACTGCACAAATCACTG
ACCCACGAGTGCAAGTGATTTCCCAACAAAATCAAGGCTTATCAGGAGCGCGCAACACGGGAATTCACCACGCATCGGGA
GAATATATAGCCTTTATTGATGCTGATGATTTATGGCTACCAACTAAATTAGAAAAGCAAGTGAAATGTTTAGATAATTC
TCCACAAGCTGGTTTAGTTTATACTTGGACAGCTTGGACTGATGAAACTGGTAAACCTACTGGTGTGATAGTCGCTTCTC
ATGTCGAAGGGTATGTTTGGGAACAAATGGTTGTCAATGACAAAATATCTAACGGTAGTTCGGCGATGGTGCGTCGTATT
TGTTTTGACAAAGTAGGCTTATTTGACACAGAATTGACCAGTTCAGAAGACCGTGATATGTGGATTAGGCTGGCGGCTCA
TTATCACTTTGCGGTTGTCAAGGAACCCCTCACACTCTACCGCCGACATTCACAAAGTATGAGCAAAAATCGTCCGAAGA
TGCTCAAAAATATCCGTCGAGTTTTTGAAAAAACTTTTGCAACAGTTCCAACAGAGCTACTATACTTGCGAAACCGGAGC
TATGGGTGGATAAATTTGTATACAGCTTGGACTTGTATGGATGAAAAGAATTACCAGGAAGCAATCAAATATCGTCGCCA
AGCTCTTTTACATTACCCGCAGATTTTTTTCACAGCCTATTTCTTACGCTTGAGTGTAGCTATTGTGATTATGCAGTTAT
TAGGCTCTCAAGGCTATGATAACCTGCGATCGCTCATTCGTAACTTGCGTAGATTGGTTTTAGGTGCTGCAACCTAA

Upstream 100 bases:

>100_bases
GGATGGAGTTAGAAATATCAGTCGAGCTTTGCGAAGAAACATCTTAGCATTAATACCTTAAAATCCTGCATAATTCCGCA
TTGAAATTACCTCCAAACTT

Downstream 100 bases:

>100_bases
TCTTGCTATTTGTTTATGTATTTATTTCACCTGCTAATATCAACTGGCTGCTCATGTTAATTAAAAAGATAAAGCAACTA
TTATCAAGTCAATTTATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MPKVSVVIPAYNAMKYLPATVESVLQQSFTDIEILIINDGSSDNIIAWTAQITDPRVQVISQQNQGLSGARNTGIHHASG
EYIAFIDADDLWLPTKLEKQVKCLDNSPQAGLVYTWTAWTDETGKPTGVIVASHVEGYVWEQMVVNDKISNGSSAMVRRI
CFDKVGLFDTELTSSEDRDMWIRLAAHYHFAVVKEPLTLYRRHSQSMSKNRPKMLKNIRRVFEKTFATVPTELLYLRNRS
YGWINLYTAWTCMDEKNYQEAIKYRRQALLHYPQIFFTAYFLRLSVAIVIMQLLGSQGYDNLRSLIRNLRRLVLGAAT

Sequences:

>Translated_318_residues
MPKVSVVIPAYNAMKYLPATVESVLQQSFTDIEILIINDGSSDNIIAWTAQITDPRVQVISQQNQGLSGARNTGIHHASG
EYIAFIDADDLWLPTKLEKQVKCLDNSPQAGLVYTWTAWTDETGKPTGVIVASHVEGYVWEQMVVNDKISNGSSAMVRRI
CFDKVGLFDTELTSSEDRDMWIRLAAHYHFAVVKEPLTLYRRHSQSMSKNRPKMLKNIRRVFEKTFATVPTELLYLRNRS
YGWINLYTAWTCMDEKNYQEAIKYRRQALLHYPQIFFTAYFLRLSVAIVIMQLLGSQGYDNLRSLIRNLRRLVLGAAT
>Mature_317_residues
PKVSVVIPAYNAMKYLPATVESVLQQSFTDIEILIINDGSSDNIIAWTAQITDPRVQVISQQNQGLSGARNTGIHHASGE
YIAFIDADDLWLPTKLEKQVKCLDNSPQAGLVYTWTAWTDETGKPTGVIVASHVEGYVWEQMVVNDKISNGSSAMVRRIC
FDKVGLFDTELTSSEDRDMWIRLAAHYHFAVVKEPLTLYRRHSQSMSKNRPKMLKNIRRVFEKTFATVPTELLYLRNRSY
GWINLYTAWTCMDEKNYQEAIKYRRQALLHYPQIFFTAYFLRLSVAIVIMQLLGSQGYDNLRSLIRNLRRLVLGAAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI57770468, Length=117, Percent_Identity=31.6239316239316, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1790044, Length=98, Percent_Identity=45.9183673469388, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI1788372, Length=282, Percent_Identity=21.9858156028369, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787259, Length=95, Percent_Identity=38.9473684210526, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36380; Mature: 36249

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVSVVIPAYNAMKYLPATVESVLQQSFTDIEILIINDGSSDNIIAWTAQITDPRVQVI
CCCEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEECCCCHHHHH
SQQNQGLSGARNTGIHHASGEYIAFIDADDLWLPTKLEKQVKCLDNSPQAGLVYTWTAWT
HCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEC
DETGKPTGVIVASHVEGYVWEQMVVNDKISNGSSAMVRRICFDKVGLFDTELTSSEDRDM
CCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
WIRLAAHYHFAVVKEPLTLYRRHSQSMSKNRPKMLKNIRRVFEKTFATVPTELLYLRNRS
EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHEECCC
YGWINLYTAWTCMDEKNYQEAIKYRRQALLHYPQIFFTAYFLRLSVAIVIMQLLGSQGYD
CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
NLRSLIRNLRRLVLGAAT
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PKVSVVIPAYNAMKYLPATVESVLQQSFTDIEILIINDGSSDNIIAWTAQITDPRVQVI
CCEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEECCCCHHHHH
SQQNQGLSGARNTGIHHASGEYIAFIDADDLWLPTKLEKQVKCLDNSPQAGLVYTWTAWT
HCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEC
DETGKPTGVIVASHVEGYVWEQMVVNDKISNGSSAMVRRICFDKVGLFDTELTSSEDRDM
CCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
WIRLAAHYHFAVVKEPLTLYRRHSQSMSKNRPKMLKNIRRVFEKTFATVPTELLYLRNRS
EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHEECCC
YGWINLYTAWTCMDEKNYQEAIKYRRQALLHYPQIFFTAYFLRLSVAIVIMQLLGSQGYD
CCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
NLRSLIRNLRRLVLGAAT
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]