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The map label for this gene is yibD [C]

Identifier: 17230562

GI number: 17230562

Start: 3719986

End: 3720942

Strand: Direct

Name: yibD [C]

Synonym: alr3070

Alternate gene names: 17230562

Gene position: 3719986-3720942 (Clockwise)

Preceding gene: 17230561

Following gene: 17230563

Centisome position: 58.0

GC content: 38.14

Gene sequence:

>957_bases
ATGCCCAAAGTTTCTGTAGTGATTCCAGCTTATAATTCTATGGCTTATCTACCAACAACGCTGGAAACTGTTTTTGCTCA
GACGTTCACCGATTTTGAAGTATTAATAATTAATGACGGTAGTTCTGACAATATTGTTAATTGGGTTTCTAGTCTCGCCG
ATGCTAGAATCCGCCTCATCACCCAAGAAAACCAAGGTTTAACAGGCGCACACAATACAGGTGTGATGCAAGCACAAGGT
GAATACATAGCATTTTTGGATGCGGATGATCTTTGGGAACCAAGCAAACTAGAAAAGCAAGTATCTTGCCTAGATAAAAA
TCCAGAAGTTGGCTTAGTAGATACTTGGGTAATGTTAATTGATGAAACAGGGAAATCTACAGGGACTGTACTGAAAACTA
ATGCCGAAGGTAATGTTTGGAAACAAATTATTCAATGTCCTACTGTTGTCTGTGGTAGTTCTCCTCTAGTCAGGAACGCT
TGTTTTCAAGAGGTAGGTTTATTTGACCCAGAAATGGGTGGCTCATCCGATTGGGATATGTGGATTCGGATTGCGTCTCG
ATATAGTTTTGGCCTAATTAAAGAACCATTAACCCTTTATAGACAACATCGTAGCAGTATGTCAAAAAACTGCGAAAGAG
TTTTTAGAGAAAATCAATCTGTCATCGAAAAAACCTTTAAATCTGTACCACCAGAACTGCAAAACTTAAAACAACGTGCC
TATGCTTTAGTTTATTTATATCTCGCTTGGAGAGCTTTAGATAATAGAAATTACGAACAAGCTATTTATTATCGTCAACA
AGCTTACACCAGCGACCCTCAAGTTATTTATTCTAAATCTGGTTTGTCTCAAAAATTCGCCATACTGGTAACTCGTTTCT
TTGGTGCTTCTGGCTTGGATGGAGTTAGAAATATCAGTCGAGCTTTGCGAAGAAACATCTTAGCATTAATACCTTAA

Upstream 100 bases:

>100_bases
TTCAGTTGGGAAAACATAGCTTTAAGGTACCGTGACTTGATTTTAAAAACTATTCAAGGTCATCAACAAAATCATTAATT
ACATTCCAAAACCAAACATT

Downstream 100 bases:

>100_bases
AATCCTGCATAATTCCGCATTGAAATTACCTCCAAACTTATGCCAAAAGTATCCGTCGTTATTCCCGCTTATAATGCAAT
GAAATACCTCCCCGCTACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MPKVSVVIPAYNSMAYLPTTLETVFAQTFTDFEVLIINDGSSDNIVNWVSSLADARIRLITQENQGLTGAHNTGVMQAQG
EYIAFLDADDLWEPSKLEKQVSCLDKNPEVGLVDTWVMLIDETGKSTGTVLKTNAEGNVWKQIIQCPTVVCGSSPLVRNA
CFQEVGLFDPEMGGSSDWDMWIRIASRYSFGLIKEPLTLYRQHRSSMSKNCERVFRENQSVIEKTFKSVPPELQNLKQRA
YALVYLYLAWRALDNRNYEQAIYYRQQAYTSDPQVIYSKSGLSQKFAILVTRFFGASGLDGVRNISRALRRNILALIP

Sequences:

>Translated_318_residues
MPKVSVVIPAYNSMAYLPTTLETVFAQTFTDFEVLIINDGSSDNIVNWVSSLADARIRLITQENQGLTGAHNTGVMQAQG
EYIAFLDADDLWEPSKLEKQVSCLDKNPEVGLVDTWVMLIDETGKSTGTVLKTNAEGNVWKQIIQCPTVVCGSSPLVRNA
CFQEVGLFDPEMGGSSDWDMWIRIASRYSFGLIKEPLTLYRQHRSSMSKNCERVFRENQSVIEKTFKSVPPELQNLKQRA
YALVYLYLAWRALDNRNYEQAIYYRQQAYTSDPQVIYSKSGLSQKFAILVTRFFGASGLDGVRNISRALRRNILALIP
>Mature_317_residues
PKVSVVIPAYNSMAYLPTTLETVFAQTFTDFEVLIINDGSSDNIVNWVSSLADARIRLITQENQGLTGAHNTGVMQAQGE
YIAFLDADDLWEPSKLEKQVSCLDKNPEVGLVDTWVMLIDETGKSTGTVLKTNAEGNVWKQIIQCPTVVCGSSPLVRNAC
FQEVGLFDPEMGGSSDWDMWIRIASRYSFGLIKEPLTLYRQHRSSMSKNCERVFRENQSVIEKTFKSVPPELQNLKQRAY
ALVYLYLAWRALDNRNYEQAIYYRQQAYTSDPQVIYSKSGLSQKFAILVTRFFGASGLDGVRNISRALRRNILALIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=225, Percent_Identity=28.4444444444444, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788372, Length=208, Percent_Identity=25.4807692307692, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 35879; Mature: 35748

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVSVVIPAYNSMAYLPTTLETVFAQTFTDFEVLIINDGSSDNIVNWVSSLADARIRLI
CCCEEEEEECCCCCEECHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCEEEEE
TQENQGLTGAHNTGVMQAQGEYIAFLDADDLWEPSKLEKQVSCLDKNPEVGLVDTWVMLI
EECCCCCCCCCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHEEEEE
DETGKSTGTVLKTNAEGNVWKQIIQCPTVVCGSSPLVRNACFQEVGLFDPEMGGSSDWDM
ECCCCCCCCEEEECCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHH
WIRIASRYSFGLIKEPLTLYRQHRSSMSKNCERVFRENQSVIEKTFKSVPPELQNLKQRA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHH
YALVYLYLAWRALDNRNYEQAIYYRQQAYTSDPQVIYSKSGLSQKFAILVTRFFGASGLD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCH
GVRNISRALRRNILALIP
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PKVSVVIPAYNSMAYLPTTLETVFAQTFTDFEVLIINDGSSDNIVNWVSSLADARIRLI
CCEEEEEECCCCCEECHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCEEEEE
TQENQGLTGAHNTGVMQAQGEYIAFLDADDLWEPSKLEKQVSCLDKNPEVGLVDTWVMLI
EECCCCCCCCCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHEEEEE
DETGKSTGTVLKTNAEGNVWKQIIQCPTVVCGSSPLVRNACFQEVGLFDPEMGGSSDWDM
ECCCCCCCCEEEECCCCHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHH
WIRIASRYSFGLIKEPLTLYRQHRSSMSKNCERVFRENQSVIEKTFKSVPPELQNLKQRA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHH
YALVYLYLAWRALDNRNYEQAIYYRQQAYTSDPQVIYSKSGLSQKFAILVTRFFGASGLD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCH
GVRNISRALRRNILALIP
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA