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The map label for this gene is 17230552

Identifier: 17230552

GI number: 17230552

Start: 3708146

End: 3709555

Strand: Direct

Name: 17230552

Synonym: alr3060

Alternate gene names: NA

Gene position: 3708146-3709555 (Clockwise)

Preceding gene: 17230551

Following gene: 17230553

Centisome position: 57.82

GC content: 42.7

Gene sequence:

>1410_bases
ATGAGGAATTATCAGCGCTCAATTAACTTTTCTGCTCTAGCCATCTGGTTAGGAGTGATAATTATCGGTTTGATTGCCGG
GTTTGCTGCTGGTGCTAGTCCAGTTTTACCTGGTTTAGCGGTAGTTTCATTAGTAGTACTGGGTTTCTTTTTTAGAAATC
TAGAACAAGCCGTATTGAGCGCTTTGATTATTCGCAGTGCCATAGATGGTATTGTTTCTCCGCCCTTACCCTCTGCGTTT
GCGATCGCTATCGACATCCTCACCTTACTATATGTAGTCGTTCTGTTGTTTCAAAAGCGCACTGTACACACCGATTGCTT
TTTGTGGTTCTTCGTTGCTTGGGTAATTTTCCAAGCGATGTGGTTAGTGCTTTTACCTATAGGTGGACTAGGACTGGATG
GCGCAGTTTTTGCTACTAGTTTACGAGAATGGGTTCGCTTGTTCTCTTGGCTGATGGTTTATTTACTAGTCATGCAGCTA
AAGGAGAAGACTCACCCCCAAACCGTGATCAATCTCCTGTTTTGGGCTTTAGTCATACCTCTGGCGATCGCATTTTTGCA
AATGTTCGTGCCTGGGCTTTTGCCATCCCAGTTTGCACCTTTGTCTGGGGGGGTTTTGTCTGAAGGTTCTCGCATTAGAG
GTAGTATTGGGCATCCTAACAGTTTTGCTACCTTCTTATTATTATTTATTGGTCTGACTACCTGGAAGCTAACTATTACT
AAAGTACGCTGGCCTTGGTTGCTGTTGCTGGGCTTACTGGCTTTCTTTTATGTCAGTACAAAAGCATTGTTTAGCTTGAT
GATGTTGGCTGTATTCATGCTGGTGTTAATTGCTCCCAGATTAAGTTTATTGAAACTTATCGGTGCAGTGTTTTTCTTCG
GCTTAGTAATATTTCTGTTCGGTAGTACAGAGTTTGGACAACAACGGCTGGGATCAATAGCACAAACACCATTGCTCAAC
CCAGATATAGATATATGGCGAGCAATTCTCTTATCTTATAGCGACAATAACAGCTTCAACTGGCGAATTGCTCAATGGCA
CGAATTACTCGAAGCCTGGAAACAGTACCCACTGTTCGGTTACGGGTTGGGCGTGACTACACATATTGCTAGTAACGGTT
TATATGCCCATAACGATTACGTCCGGGCATTAACAGAAGGTGGAATTGTTGGTTTAGTCAGCTTTATAGCCTTCTTTGGT
GTACAGATTGGGCGAATTGTGCAGTTAATGAGGCGATCGCTATTCAATAAAACACAGAATAGTCTTTGCTTGGTTTTATT
AGCACTTATTTTAACAATGCCTGTGGGAATGATTACTGAAAATGTTTGGAGTCATACCATGTTGTTCTTTTATTGGTTTA
CTTTGCTGGCGGTAGCCGGTTGGGATTGGAACGCCAAGCCCACAACGTAA

Upstream 100 bases:

>100_bases
CGGAGGAATATCCCTCGATATTATCTAGACCGTTGAGACGTTTAACATCTCTGGGTAGTAGCGCCAGAAATTCATCCAAC
GATTCTAGGTCGAACTGAAG

Downstream 100 bases:

>100_bases
TACAATTCAAAATTCAAAATAAACATTCTTAAATTCCATATTACACAGATTAATAATAAGGAAGCATCATGGCTGATAAT
TCTCAAACTAAGAAAAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MRNYQRSINFSALAIWLGVIIIGLIAGFAAGASPVLPGLAVVSLVVLGFFFRNLEQAVLSALIIRSAIDGIVSPPLPSAF
AIAIDILTLLYVVVLLFQKRTVHTDCFLWFFVAWVIFQAMWLVLLPIGGLGLDGAVFATSLREWVRLFSWLMVYLLVMQL
KEKTHPQTVINLLFWALVIPLAIAFLQMFVPGLLPSQFAPLSGGVLSEGSRIRGSIGHPNSFATFLLLFIGLTTWKLTIT
KVRWPWLLLLGLLAFFYVSTKALFSLMMLAVFMLVLIAPRLSLLKLIGAVFFFGLVIFLFGSTEFGQQRLGSIAQTPLLN
PDIDIWRAILLSYSDNNSFNWRIAQWHELLEAWKQYPLFGYGLGVTTHIASNGLYAHNDYVRALTEGGIVGLVSFIAFFG
VQIGRIVQLMRRSLFNKTQNSLCLVLLALILTMPVGMITENVWSHTMLFFYWFTLLAVAGWDWNAKPTT

Sequences:

>Translated_469_residues
MRNYQRSINFSALAIWLGVIIIGLIAGFAAGASPVLPGLAVVSLVVLGFFFRNLEQAVLSALIIRSAIDGIVSPPLPSAF
AIAIDILTLLYVVVLLFQKRTVHTDCFLWFFVAWVIFQAMWLVLLPIGGLGLDGAVFATSLREWVRLFSWLMVYLLVMQL
KEKTHPQTVINLLFWALVIPLAIAFLQMFVPGLLPSQFAPLSGGVLSEGSRIRGSIGHPNSFATFLLLFIGLTTWKLTIT
KVRWPWLLLLGLLAFFYVSTKALFSLMMLAVFMLVLIAPRLSLLKLIGAVFFFGLVIFLFGSTEFGQQRLGSIAQTPLLN
PDIDIWRAILLSYSDNNSFNWRIAQWHELLEAWKQYPLFGYGLGVTTHIASNGLYAHNDYVRALTEGGIVGLVSFIAFFG
VQIGRIVQLMRRSLFNKTQNSLCLVLLALILTMPVGMITENVWSHTMLFFYWFTLLAVAGWDWNAKPTT
>Mature_469_residues
MRNYQRSINFSALAIWLGVIIIGLIAGFAAGASPVLPGLAVVSLVVLGFFFRNLEQAVLSALIIRSAIDGIVSPPLPSAF
AIAIDILTLLYVVVLLFQKRTVHTDCFLWFFVAWVIFQAMWLVLLPIGGLGLDGAVFATSLREWVRLFSWLMVYLLVMQL
KEKTHPQTVINLLFWALVIPLAIAFLQMFVPGLLPSQFAPLSGGVLSEGSRIRGSIGHPNSFATFLLLFIGLTTWKLTIT
KVRWPWLLLLGLLAFFYVSTKALFSLMMLAVFMLVLIAPRLSLLKLIGAVFFFGLVIFLFGSTEFGQQRLGSIAQTPLLN
PDIDIWRAILLSYSDNNSFNWRIAQWHELLEAWKQYPLFGYGLGVTTHIASNGLYAHNDYVRALTEGGIVGLVSFIAFFG
VQIGRIVQLMRRSLFNKTQNSLCLVLLALILTMPVGMITENVWSHTMLFFYWFTLLAVAGWDWNAKPTT

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52433; Mature: 52433

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA