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The map label for this gene is 17230540

Identifier: 17230540

GI number: 17230540

Start: 3690925

End: 3691578

Strand: Reverse

Name: 17230540

Synonym: all3048

Alternate gene names: NA

Gene position: 3691578-3690925 (Counterclockwise)

Preceding gene: 17230541

Following gene: 17230539

Centisome position: 57.56

GC content: 45.87

Gene sequence:

>654_bases
ATGAGCGAGCTGGAGCGGTATTATAGGGTATTGGAATTGGAAGTAGGGGCTACCCTTGAGGAAGTTAACCAAGCTTATAA
GGATTTGGTGTTTGTGTGGCATCCCGATCGCCTACCCAAAGATAATGTCCGCTTGCAACAAAAAGCACAAGACAAACTCA
AGGCCATTAACGAAGCTCGTGACAAATTGCGCTCGTTAAATGGCAATGGTAAGGCTCATCATGTTTATCACCATCGCCCA
CCGGAACCCCAAAAATCATACCAAGAAACCCATCAGCCACAAAAACAGAACTCAGACTTGAGTGGCAAAGATTTTAGTCG
GGCAAATTTGAGTAACAAAGATTTATCTGGCAGAAACCTCAGCTATGCTAACCTGAGCGGTGCTAATCTCAGTGACACTT
TTATGCACAAAGTGATTCTCAGAGGTGCGGATTTGTCAGAGGCCAACTTGTTTAGAGCCAATTTACTCTTAGCTGACTTA
AGAGAAGCGAATTTGCGCTCTGCTAATTTAATTGGTGCTGATCTCAGTGGTGCTGACTTGCGGGGTGCAGACCTGACAGG
AGCGCGGATTCGTTCAGGCGATCGCCTACTGGTAAAGTTGATAGGCGCAAACTTAAGTGGTGCGATTATGCCTGATGGGC
TTGTTCATCGCTAA

Upstream 100 bases:

>100_bases
TAAACTATGTAAAAGTGACTACGGAACTGCCCAGTCCCTATTGATAAATATGGAGGGCTATATCTCTCATAATTAAGTTG
ATTCGCCACTAAAACATCTT

Downstream 100 bases:

>100_bases
TAAACTGTGCTGGGTAGGGAATTCTTGTTTTAAGCTAAATTTCCCATTGATCAATCAGTTATTTGGTTAAAATCTATTTC
AATTCCTGACGGGGATTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSELERYYRVLELEVGATLEEVNQAYKDLVFVWHPDRLPKDNVRLQQKAQDKLKAINEARDKLRSLNGNGKAHHVYHHRP
PEPQKSYQETHQPQKQNSDLSGKDFSRANLSNKDLSGRNLSYANLSGANLSDTFMHKVILRGADLSEANLFRANLLLADL
REANLRSANLIGADLSGADLRGADLTGARIRSGDRLLVKLIGANLSGAIMPDGLVHR

Sequences:

>Translated_217_residues
MSELERYYRVLELEVGATLEEVNQAYKDLVFVWHPDRLPKDNVRLQQKAQDKLKAINEARDKLRSLNGNGKAHHVYHHRP
PEPQKSYQETHQPQKQNSDLSGKDFSRANLSNKDLSGRNLSYANLSGANLSDTFMHKVILRGADLSEANLFRANLLLADL
REANLRSANLIGADLSGADLRGADLTGARIRSGDRLLVKLIGANLSGAIMPDGLVHR
>Mature_216_residues
SELERYYRVLELEVGATLEEVNQAYKDLVFVWHPDRLPKDNVRLQQKAQDKLKAINEARDKLRSLNGNGKAHHVYHHRPP
EPQKSYQETHQPQKQNSDLSGKDFSRANLSNKDLSGRNLSYANLSGANLSDTFMHKVILRGADLSEANLFRANLLLADLR
EANLRSANLIGADLSGADLRGADLTGARIRSGDRLLVKLIGANLSGAIMPDGLVHR

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 24212; Mature: 24080

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELERYYRVLELEVGATLEEVNQAYKDLVFVWHPDRLPKDNVRLQQKAQDKLKAINEAR
CHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
DKLRSLNGNGKAHHVYHHRPPEPQKSYQETHQPQKQNSDLSGKDFSRANLSNKDLSGRNL
HHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
SYANLSGANLSDTFMHKVILRGADLSEANLFRANLLLADLREANLRSANLIGADLSGADL
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC
RGADLTGARIRSGDRLLVKLIGANLSGAIMPDGLVHR
CCCCCCCHHHCCCCCEEEHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SELERYYRVLELEVGATLEEVNQAYKDLVFVWHPDRLPKDNVRLQQKAQDKLKAINEAR
HHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
DKLRSLNGNGKAHHVYHHRPPEPQKSYQETHQPQKQNSDLSGKDFSRANLSNKDLSGRNL
HHHHHCCCCCCEEEEECCCCCCHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
SYANLSGANLSDTFMHKVILRGADLSEANLFRANLLLADLREANLRSANLIGADLSGADL
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCC
RGADLTGARIRSGDRLLVKLIGANLSGAIMPDGLVHR
CCCCCCCHHHCCCCCEEEHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA