| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230536
Identifier: 17230536
GI number: 17230536
Start: 3686631
End: 3687125
Strand: Reverse
Name: 17230536
Synonym: all3044
Alternate gene names: NA
Gene position: 3687125-3686631 (Counterclockwise)
Preceding gene: 17230537
Following gene: 17230533
Centisome position: 57.49
GC content: 36.16
Gene sequence:
>495_bases GTGGATTGGTTTAGCTTGCTTAAAGGTGCAATCATTGGGGGAGTGCTTTTATTTTTATGGAGTGGACTCACCCAAAGCTT AACACCTTGGGGTATTAGAAGTGTTAAGGAGTTGGAAACTCAATCAACCGTGGGTGAAATTTTGGAACGCCAATCCACGA AAGGATTGTATTATATAAAAGACAAAGTTACAGCGTTTATCGCGGTCAGGACTGAGAGCTACTATTCCATAAGTCGATTC TTTATCATTGAATTTATTACTGAATTACTGGTTGCAACTACTTTGACATCAATATTGCTGTTAACAGCAACACAATCTAT TTATACACGATTATTATTGATTGTGTTAACAACTCTCACCAGTATTTTCAGTGTTGATTTGCAATATTGGAATTGGTGGG GATTTTCTACTATTTACAGCTTGGGAATTTCTATAAACCGTTTGATTGGTCACTTGCTAATTAGCTTCATTCTCATATCA TTTGTCTTGCCATAA
Upstream 100 bases:
>100_bases AAATCATAGAGGGGTTATTGTAAGAATTCATAAATCTTTCTCTGTTTAGTATAATTATGTGTGAATGTCACCAAAATACA TACTTTAGAGGAGATAAAAC
Downstream 100 bases:
>100_bases GGATGTAGATTGTTTTCTGTATGACATTTTCATTAATCTATCAATCACTGCTCATCCCGCATCACGATGAATATCTATCT TAATTTTTGAACTCCGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MDWFSLLKGAIIGGVLLFLWSGLTQSLTPWGIRSVKELETQSTVGEILERQSTKGLYYIKDKVTAFIAVRTESYYSISRF FIIEFITELLVATTLTSILLLTATQSIYTRLLLIVLTTLTSIFSVDLQYWNWWGFSTIYSLGISINRLIGHLLISFILIS FVLP
Sequences:
>Translated_164_residues MDWFSLLKGAIIGGVLLFLWSGLTQSLTPWGIRSVKELETQSTVGEILERQSTKGLYYIKDKVTAFIAVRTESYYSISRF FIIEFITELLVATTLTSILLLTATQSIYTRLLLIVLTTLTSIFSVDLQYWNWWGFSTIYSLGISINRLIGHLLISFILIS FVLP >Mature_164_residues MDWFSLLKGAIIGGVLLFLWSGLTQSLTPWGIRSVKELETQSTVGEILERQSTKGLYYIKDKVTAFIAVRTESYYSISRF FIIEFITELLVATTLTSILLLTATQSIYTRLLLIVLTTLTSIFSVDLQYWNWWGFSTIYSLGISINRLIGHLLISFILIS FVLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18658; Mature: 18658
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWFSLLKGAIIGGVLLFLWSGLTQSLTPWGIRSVKELETQSTVGEILERQSTKGLYYIK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH DKVTAFIAVRTESYYSISRFFIIEFITELLVATTLTSILLLTATQSIYTRLLLIVLTTLT HHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIFSVDLQYWNWWGFSTIYSLGISINRLIGHLLISFILISFVLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDWFSLLKGAIIGGVLLFLWSGLTQSLTPWGIRSVKELETQSTVGEILERQSTKGLYYIK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH DKVTAFIAVRTESYYSISRFFIIEFITELLVATTLTSILLLTATQSIYTRLLLIVLTTLT HHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIFSVDLQYWNWWGFSTIYSLGISINRLIGHLLISFILISFVLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA