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The map label for this gene is 17230520

Identifier: 17230520

GI number: 17230520

Start: 3668179

End: 3669273

Strand: Reverse

Name: 17230520

Synonym: all3028

Alternate gene names: NA

Gene position: 3669273-3668179 (Counterclockwise)

Preceding gene: 17230521

Following gene: 17230517

Centisome position: 57.21

GC content: 43.38

Gene sequence:

>1095_bases
ATGAAACGCCGAGAAGTTTTGAATACTGCTGCGATCGCCACAGCAACTACAGCTTTAGTTTCCTGTACCCAAACTAATAC
ATCTTCCGTACAAGCAGGATTACCAAACGTGCGCTGGCGAATGACGACTAGCTGGCCTAAGTCTTTAGGAACTTTTATTG
GTGCAGAAACCGTTGCCAAAAGAGTAGCAGAAATGACCAACGGGCGTTTCAAAATTACACCATTTGCGGCGGGGGAATTA
GTACCAGGTTTGCAAGTTCTCGATGCTGTACAAGCCGGAACTGTGGAATGTGGTCATACATCCAGTTACTATTACATCGG
TAAAAGTCCGGCTTTGGCTTTCGCCACCTCTGTACCCTTCGGTTTAAATGCCCAACAACAGTATGCTTGGCTTTACCAGG
GTGGTGGACTAGCGGCTATCCAAAAAATTTATGCTAATTTCAATGTGATTAATTTTCCGGCTGGTAGTACCGGCGCACAG
ATGGGGGGATGGTTCAAAAAAGAAATTAAATCTGTCTCTGACCTCAAAGGCTTGAAAATGCGGATTCCGGGCTTAGGCGG
ACAAGTTATGTCCCGTTTAGGTGTAAATGTGCAAGTATTACCAGGAGGCGAAATTTATTTAGCTTTAGACAGAGGTGCAA
TTGATGCAGCCGAATGGGTAGGCCCCTACGATGACGAGAAACTGGGACTGAATAAAGCTGCCCAATTTTACTATTATCCT
GGTTGGTGGGAACCAGGCCCAACTTTGGATGTATTAGTTAACCTGAATGCTTGGAATCGTCTCCCAAAGGAATATCAGGA
AATATTTAAAACGGCGACTGTAGAAGCTAACTTAACGATGCTCAATCAGTATGATGCTTTAAATGGAGAAGCGCTTACAA
GATTACTAGCAGGTGGGACAAAGCTTGTTCCCTACAGTCAAGAAATTATGCAGGCGGCTCAGAAAATTTCTTTTGATATT
TTTGAAGAAAATGCTAGTAAAGATGCAGCTTTCAAACAAGTTTACGAGCAGTGGAAAGCCTTCCGTAAGCAGATTTTCGC
CTGGAATCGGGTTAATGAATTGAGCTATGAAAATTTTGCTAGTTCTAGTCAATAG

Upstream 100 bases:

>100_bases
TTTCGCTTAATGGAATTAAGAATAAGCAAAAAATGGCAAAAAACTGATAAAGTTCTGTATCAGCCTGGATTTACGTCATT
TCCCTAACTAACACCAAACT

Downstream 100 bases:

>100_bases
TCAGTTGTCAGTTGCTAATAGTTTTTTTAGAGGGTATAGGGGTGTAAGGGTGTGGGGGTGTAGGGGAAAGATATCTTTCA
TCTATGACTGTGAAATTTTT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: Twin-Arginine Translocation Pathway Signal; TRAP Dicarboxylate Transporter Subunit DctP; Trap Dicarboxylate Transporter- Dctp Subunit; Transporter Periplasmic Component; TRAP Mannitol/C4-Dicarboxylate Transporter; TRAP-Type Mannitol/Chloroaromatic Compound Transport System; TRAP Dicarboxylate Transporter DctP Subunit; Tat Pathway Signal Sequence Domain-Containing Protein; Periplasmic TRAP-Type Dicarboxylate Transporter Protein; Trap-T Transport System Periplasmic Component; TRAP Dicarboxylate Transporter-DctP Subunit; C4-Dicarboxylate Transporter; TRAP Transporter; Tat Pathway Signal Sequence Domain-Containing; TRAP Dicarboxylate Transporter; TRAP Dicarboxylate Transporter- Dctp Subunit

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKRREVLNTAAIATATTALVSCTQTNTSSVQAGLPNVRWRMTTSWPKSLGTFIGAETVAKRVAEMTNGRFKITPFAAGEL
VPGLQVLDAVQAGTVECGHTSSYYYIGKSPALAFATSVPFGLNAQQQYAWLYQGGGLAAIQKIYANFNVINFPAGSTGAQ
MGGWFKKEIKSVSDLKGLKMRIPGLGGQVMSRLGVNVQVLPGGEIYLALDRGAIDAAEWVGPYDDEKLGLNKAAQFYYYP
GWWEPGPTLDVLVNLNAWNRLPKEYQEIFKTATVEANLTMLNQYDALNGEALTRLLAGGTKLVPYSQEIMQAAQKISFDI
FEENASKDAAFKQVYEQWKAFRKQIFAWNRVNELSYENFASSSQ

Sequences:

>Translated_364_residues
MKRREVLNTAAIATATTALVSCTQTNTSSVQAGLPNVRWRMTTSWPKSLGTFIGAETVAKRVAEMTNGRFKITPFAAGEL
VPGLQVLDAVQAGTVECGHTSSYYYIGKSPALAFATSVPFGLNAQQQYAWLYQGGGLAAIQKIYANFNVINFPAGSTGAQ
MGGWFKKEIKSVSDLKGLKMRIPGLGGQVMSRLGVNVQVLPGGEIYLALDRGAIDAAEWVGPYDDEKLGLNKAAQFYYYP
GWWEPGPTLDVLVNLNAWNRLPKEYQEIFKTATVEANLTMLNQYDALNGEALTRLLAGGTKLVPYSQEIMQAAQKISFDI
FEENASKDAAFKQVYEQWKAFRKQIFAWNRVNELSYENFASSSQ
>Mature_364_residues
MKRREVLNTAAIATATTALVSCTQTNTSSVQAGLPNVRWRMTTSWPKSLGTFIGAETVAKRVAEMTNGRFKITPFAAGEL
VPGLQVLDAVQAGTVECGHTSSYYYIGKSPALAFATSVPFGLNAQQQYAWLYQGGGLAAIQKIYANFNVINFPAGSTGAQ
MGGWFKKEIKSVSDLKGLKMRIPGLGGQVMSRLGVNVQVLPGGEIYLALDRGAIDAAEWVGPYDDEKLGLNKAAQFYYYP
GWWEPGPTLDVLVNLNAWNRLPKEYQEIFKTATVEANLTMLNQYDALNGEALTRLLAGGTKLVPYSQEIMQAAQKISFDI
FEENASKDAAFKQVYEQWKAFRKQIFAWNRVNELSYENFASSSQ

Specific function: Unknown

COG id: COG4663

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40012; Mature: 40012

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRREVLNTAAIATATTALVSCTQTNTSSVQAGLPNVRWRMTTSWPKSLGTFIGAETVAK
CCHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH
RVAEMTNGRFKITPFAAGELVPGLQVLDAVQAGTVECGHTSSYYYIGKSPALAFATSVPF
HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCEECCCCCCEEEEECCCCEEEEECCCC
GLNAQQQYAWLYQGGGLAAIQKIYANFNVINFPAGSTGAQMGGWFKKEIKSVSDLKGLKM
CCCCCHHEEEEEECCCHHHHHHHHHCCCEEECCCCCCCCHHCCHHHHHHHHHHHCCCCEE
RIPGLGGQVMSRLGVNVQVLPGGEIYLALDRGAIDAAEWVGPYDDEKLGLNKAAQFYYYP
ECCCCCHHHHHHHCCEEEEECCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCEEEEECC
GWWEPGPTLDVLVNLNAWNRLPKEYQEIFKTATVEANLTMLNQYDALNGEALTRLLAGGT
CCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHCEEECEEEEECCCCCCHHHHHHHHHCCC
KLVPYSQEIMQAAQKISFDIFEENASKDAAFKQVYEQWKAFRKQIFAWNRVNELSYENFA
EECCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHC
SSSQ
CCCC
>Mature Secondary Structure
MKRREVLNTAAIATATTALVSCTQTNTSSVQAGLPNVRWRMTTSWPKSLGTFIGAETVAK
CCHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHH
RVAEMTNGRFKITPFAAGELVPGLQVLDAVQAGTVECGHTSSYYYIGKSPALAFATSVPF
HHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCEECCCCCCEEEEECCCCEEEEECCCC
GLNAQQQYAWLYQGGGLAAIQKIYANFNVINFPAGSTGAQMGGWFKKEIKSVSDLKGLKM
CCCCCHHEEEEEECCCHHHHHHHHHCCCEEECCCCCCCCHHCCHHHHHHHHHHHCCCCEE
RIPGLGGQVMSRLGVNVQVLPGGEIYLALDRGAIDAAEWVGPYDDEKLGLNKAAQFYYYP
ECCCCCHHHHHHHCCEEEEECCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCEEEEECC
GWWEPGPTLDVLVNLNAWNRLPKEYQEIFKTATVEANLTMLNQYDALNGEALTRLLAGGT
CCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHCEEECEEEEECCCCCCHHHHHHHHHCCC
KLVPYSQEIMQAAQKISFDIFEENASKDAAFKQVYEQWKAFRKQIFAWNRVNELSYENFA
EECCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHC
SSSQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA