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The map label for this gene is yafE [C]

Identifier: 17230508

GI number: 17230508

Start: 3658002

End: 3658664

Strand: Reverse

Name: yafE [C]

Synonym: all3016

Alternate gene names: 17230508

Gene position: 3658664-3658002 (Counterclockwise)

Preceding gene: 17230513

Following gene: 17230506

Centisome position: 57.04

GC content: 43.44

Gene sequence:

>663_bases
ATGCACAGACAACTAGAACCAGAAGTGATGGATAGTTGGGAGGAAGCTAGTGAATATGATGCAATGGATTTTACCGAGGT
AAATAATGCTTTTGCGGAAGAGGCAGTGGCTTGTGGTCTATCAGAACATGGTTTAGTCTTGGATGCGGGTACTGGTACTG
CACGGATTCCGGTTTTAATCTGTCAGAAACGTCCTCAGTGGCAGTTAGTGGCGATTGATATGGCTGAAAATATGCTACAA
ATTGCTACACAGCACGTCCAGCAGTCTGGGTTACAAGAACATATTCGTTTGGAACTGGTAGATGCGAAACGTTTACCTTA
CGAGGATGGGATATTTGATTTGGTCGTTTCTAACAGTCTAGTTCACCATCTACCTGACCCTTTACCTTTTTTTGCCGAAA
TCAAGCGCGTTTGCAAACCTCAAGGCGGTATTTTTATCCGTGATTTACTTCGTCCTGAGGATGAAGCAACGATGAACGCT
TTAGTGGCAAGTATTGGGAATGAATACGATGACTATCAGAAAAAATTATTTCGTGATTCGCTCCACGCTGCATTGACGTT
AGATGAGGTTAATCAGCTGATTATAACAGCAGGGTTAACAGGTGTGGAGATTTATCAGTCAAGCGATCGCCACTGGACGG
CTAAACGCAGTTGGACTAATTAG

Upstream 100 bases:

>100_bases
TGTTTTCATTTCAGTAAAATAACTAGTTCAATTCTCCATCCATAGCCTCAGCGTCCCTATTTCTTGCTAGTTTTTACTTA
TACGGATAGAGGTATTAGCA

Downstream 100 bases:

>100_bases
AAATCTCATACTGTTCGGCTTCCGCTAGCCAGCTTAATCTATTGATTGGTGTTTTTGTTTGCCAAATTTGTTCAAACTCG
GCTCTTGTAATCCCAAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: SAM-Dependent Methyltransferase; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; UbiE/COQ5 Methyltransferase; Methyltransferase; SAM Dependent Methyltransferase; Protein Yxbb; Methyltransferase Domain Family; Methylase

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MHRQLEPEVMDSWEEASEYDAMDFTEVNNAFAEEAVACGLSEHGLVLDAGTGTARIPVLICQKRPQWQLVAIDMAENMLQ
IATQHVQQSGLQEHIRLELVDAKRLPYEDGIFDLVVSNSLVHHLPDPLPFFAEIKRVCKPQGGIFIRDLLRPEDEATMNA
LVASIGNEYDDYQKKLFRDSLHAALTLDEVNQLIITAGLTGVEIYQSSDRHWTAKRSWTN

Sequences:

>Translated_220_residues
MHRQLEPEVMDSWEEASEYDAMDFTEVNNAFAEEAVACGLSEHGLVLDAGTGTARIPVLICQKRPQWQLVAIDMAENMLQ
IATQHVQQSGLQEHIRLELVDAKRLPYEDGIFDLVVSNSLVHHLPDPLPFFAEIKRVCKPQGGIFIRDLLRPEDEATMNA
LVASIGNEYDDYQKKLFRDSLHAALTLDEVNQLIITAGLTGVEIYQSSDRHWTAKRSWTN
>Mature_220_residues
MHRQLEPEVMDSWEEASEYDAMDFTEVNNAFAEEAVACGLSEHGLVLDAGTGTARIPVLICQKRPQWQLVAIDMAENMLQ
IATQHVQQSGLQEHIRLELVDAKRLPYEDGIFDLVVSNSLVHHLPDPLPFFAEIKRVCKPQGGIFIRDLLRPEDEATMNA
LVASIGNEYDDYQKKLFRDSLHAALTLDEVNQLIITAGLTGVEIYQSSDRHWTAKRSWTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24857; Mature: 24857

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRQLEPEVMDSWEEASEYDAMDFTEVNNAFAEEAVACGLSEHGLVLDAGTGTARIPVLI
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEE
CQKRPQWQLVAIDMAENMLQIATQHVQQSGLQEHIRLELVDAKRLPYEDGIFDLVVSNSL
ECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHH
VHHLPDPLPFFAEIKRVCKPQGGIFIRDLLRPEDEATMNALVASIGNEYDDYQKKLFRDS
HHHCCCCCCHHHHHHHHHCCCCCEEHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LHAALTLDEVNQLIITAGLTGVEIYQSSDRHWTAKRSWTN
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCC
>Mature Secondary Structure
MHRQLEPEVMDSWEEASEYDAMDFTEVNNAFAEEAVACGLSEHGLVLDAGTGTARIPVLI
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEE
CQKRPQWQLVAIDMAENMLQIATQHVQQSGLQEHIRLELVDAKRLPYEDGIFDLVVSNSL
ECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHH
VHHLPDPLPFFAEIKRVCKPQGGIFIRDLLRPEDEATMNALVASIGNEYDDYQKKLFRDS
HHHCCCCCCHHHHHHHHHCCCCCEEHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LHAALTLDEVNQLIITAGLTGVEIYQSSDRHWTAKRSWTN
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA