| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230461
Identifier: 17230461
GI number: 17230461
Start: 3611012
End: 3612751
Strand: Reverse
Name: 17230461
Synonym: all2969
Alternate gene names: NA
Gene position: 3612751-3611012 (Counterclockwise)
Preceding gene: 17230462
Following gene: 17230457
Centisome position: 56.33
GC content: 33.05
Gene sequence:
>1740_bases GTGATGTATGATACTAGAAATCAATGCTTAAACACTAAGTATTCAGTTTCACATCATCATTATCAAAATATAATTATTAT GTTTAAACTTAGCTCAGAGTTAAAGAATCTTAGTAAGATCACGCTTATAGGATACAGTCTGATATTTTTAGCGATCGCCG TCGGTTTTATCACCAGAATCATCGCTGTTTTTCAATATGTTTCATTCGATATTGGCCCAGCGCCTGATCAAATTAAAGAT GCCTTTACTGTTATTAATATGTGGAAAGGAGAGTTGCCTACACTTGGCCCCCAAGCTGCTGTAGGCGGACACCATATTTT ACCCCTCTATTATTATCTTTTCTTTCCTTTCACCCTTTTAGGAGCATCTCCGGTTTTTCAAGCTTTCCCAAACGCCTTAT TCTCTTTTTTATCTATCCCTCTATTAATTTATTTAGTTTACCAATTATTAGAAAATGTTGAACCACAAACCAGAATTATG CTAAGTGGTTTAGCTGGATTTTGGTACAGTGTGCTTTACGGGGAAATATTTATTAGTAACTTTCAATGGAATCCAAGTTC GGTTCCTTTCTTTTTAATAGCCTTTACATTGCTGTACTATTTTCAAATGGAGGGTAAATTTTCTCTCCCTATACAAGCAA TATGTTGGGCAGTATATGGAGTAGTTTTAGCTATATTAATGAGTTTGCACTCCTCCACGCTATTTGTCATGCCCGTGGTA TTTATTATTAATTGCGCTATTTTTATATATAAAGCAGTTAAAAGAAAAAGCTACTCATTAATAACTTTACCTATCATCAG TATTTTGGCGAGCGCAATTGTATTATTGCCGTATTGGATAGGTGAATTTGGACGGGGGTTTAAAAATACAAAGTATATTC TTAAAACTATATTTAAGGCTAAGTCAGCATCAGATAATTCTTTGTTGATGAGCCTGGGTAAAAGACTAAGCAATTTATTT CTGAACTATTACAAGCTATTTCAAGAAGCATATCTTTGGCATCCATCTTGGATTTACTTCCTCATAACTCTTATCTTTAT CTCTTTAGTTACATATTTGGGGATAATTAAATTTAAGGGAAATCAATATATTTGGGGTAGTTTGTGTGCTACATGGGGCA TTTATCTATATGCTGCTTCTAACCTTGATTCAGAAATAACTTATTTTCATTATAAGTTACTCATTGTATTTGCACCCATT GTTTTAACAATTACATCCCTGGCATACAACAAATTTTCCCAAAGCAAGAAACGGATTCTTTATATATTTAGTGGCATCAT TATTACCATTTCCTGCTTTAGTAATTTATTTTATGAATCTCAGTTTCTATTAAGTAAATATGGTAGCAATCGGGTAATGA ACACAGCAGATATGACTGAAATAATTAGTAAATTACCTTCAGATGCAGTCCTCTGCGACCCCAGAATTAGGAAGAGGAGA AAAATTCATAATCAATATAATTATATTGATAGTAATATTACGCGTCAGGGAATTAAACTTGTTAACGTTTGTGAAGCTGG CAATTATGTCATCCATCCTAAAAGATTATTGCTGCTTGAGAGTGGTTATATTAATGACACGAGTTATGAAAAACCATACT ATGTAAAATTTACACAATCAGATTTGCAGAATCTATGGCCAATATTTAAAATTGCTGATAATACCAAAATTACTAGACCA GCCAAGGTTTTTTTAGAAACAGATACAGCGACAGTGTATATTTTAGATCAACAAGGGTGA
Upstream 100 bases:
>100_bases CAAAAAAGTTGATGTGTTTTTTGTCACTATAATAAAATGCTTGACTTTCTAAGTATCTTCATGGATACATAGCAATAAAA AAACAAAAATTTATAAACTC
Downstream 100 bases:
>100_bases ACTACACAATACACCTGAAATTATGTCACATGATATAGCTGGGGACTGGGGACTAGGGACTGGGGAGTGGGTTAAAAGTC TTGTTGTGTCTAGGTTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 579; Mature: 579
Protein sequence:
>579_residues MMYDTRNQCLNTKYSVSHHHYQNIIIMFKLSSELKNLSKITLIGYSLIFLAIAVGFITRIIAVFQYVSFDIGPAPDQIKD AFTVINMWKGELPTLGPQAAVGGHHILPLYYYLFFPFTLLGASPVFQAFPNALFSFLSIPLLIYLVYQLLENVEPQTRIM LSGLAGFWYSVLYGEIFISNFQWNPSSVPFFLIAFTLLYYFQMEGKFSLPIQAICWAVYGVVLAILMSLHSSTLFVMPVV FIINCAIFIYKAVKRKSYSLITLPIISILASAIVLLPYWIGEFGRGFKNTKYILKTIFKAKSASDNSLLMSLGKRLSNLF LNYYKLFQEAYLWHPSWIYFLITLIFISLVTYLGIIKFKGNQYIWGSLCATWGIYLYAASNLDSEITYFHYKLLIVFAPI VLTITSLAYNKFSQSKKRILYIFSGIIITISCFSNLFYESQFLLSKYGSNRVMNTADMTEIISKLPSDAVLCDPRIRKRR KIHNQYNYIDSNITRQGIKLVNVCEAGNYVIHPKRLLLLESGYINDTSYEKPYYVKFTQSDLQNLWPIFKIADNTKITRP AKVFLETDTATVYILDQQG
Sequences:
>Translated_579_residues MMYDTRNQCLNTKYSVSHHHYQNIIIMFKLSSELKNLSKITLIGYSLIFLAIAVGFITRIIAVFQYVSFDIGPAPDQIKD AFTVINMWKGELPTLGPQAAVGGHHILPLYYYLFFPFTLLGASPVFQAFPNALFSFLSIPLLIYLVYQLLENVEPQTRIM LSGLAGFWYSVLYGEIFISNFQWNPSSVPFFLIAFTLLYYFQMEGKFSLPIQAICWAVYGVVLAILMSLHSSTLFVMPVV FIINCAIFIYKAVKRKSYSLITLPIISILASAIVLLPYWIGEFGRGFKNTKYILKTIFKAKSASDNSLLMSLGKRLSNLF LNYYKLFQEAYLWHPSWIYFLITLIFISLVTYLGIIKFKGNQYIWGSLCATWGIYLYAASNLDSEITYFHYKLLIVFAPI VLTITSLAYNKFSQSKKRILYIFSGIIITISCFSNLFYESQFLLSKYGSNRVMNTADMTEIISKLPSDAVLCDPRIRKRR KIHNQYNYIDSNITRQGIKLVNVCEAGNYVIHPKRLLLLESGYINDTSYEKPYYVKFTQSDLQNLWPIFKIADNTKITRP AKVFLETDTATVYILDQQG >Mature_579_residues MMYDTRNQCLNTKYSVSHHHYQNIIIMFKLSSELKNLSKITLIGYSLIFLAIAVGFITRIIAVFQYVSFDIGPAPDQIKD AFTVINMWKGELPTLGPQAAVGGHHILPLYYYLFFPFTLLGASPVFQAFPNALFSFLSIPLLIYLVYQLLENVEPQTRIM LSGLAGFWYSVLYGEIFISNFQWNPSSVPFFLIAFTLLYYFQMEGKFSLPIQAICWAVYGVVLAILMSLHSSTLFVMPVV FIINCAIFIYKAVKRKSYSLITLPIISILASAIVLLPYWIGEFGRGFKNTKYILKTIFKAKSASDNSLLMSLGKRLSNLF LNYYKLFQEAYLWHPSWIYFLITLIFISLVTYLGIIKFKGNQYIWGSLCATWGIYLYAASNLDSEITYFHYKLLIVFAPI VLTITSLAYNKFSQSKKRILYIFSGIIITISCFSNLFYESQFLLSKYGSNRVMNTADMTEIISKLPSDAVLCDPRIRKRR KIHNQYNYIDSNITRQGIKLVNVCEAGNYVIHPKRLLLLESGYINDTSYEKPYYVKFTQSDLQNLWPIFKIADNTKITRP AKVFLETDTATVYILDQQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66558; Mature: 66558
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMYDTRNQCLNTKYSVSHHHYQNIIIMFKLSSELKNLSKITLIGYSLIFLAIAVGFITRI CCCCCCHHHCCCCCCCCHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAVFQYVSFDIGPAPDQIKDAFTVINMWKGELPTLGPQAAVGGHHILPLYYYLFFPFTLL HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH GASPVFQAFPNALFSFLSIPLLIYLVYQLLENVEPQTRIMLSGLAGFWYSVLYGEIFISN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC FQWNPSSVPFFLIAFTLLYYFQMEGKFSLPIQAICWAVYGVVLAILMSLHSSTLFVMPVV CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH FIINCAIFIYKAVKRKSYSLITLPIISILASAIVLLPYWIGEFGRGFKNTKYILKTIFKA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH KSASDNSLLMSLGKRLSNLFLNYYKLFQEAYLWHPSWIYFLITLIFISLVTYLGIIKFKG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECC NQYIWGSLCATWGIYLYAASNLDSEITYFHYKLLIVFAPIVLTITSLAYNKFSQSKKRIL CEEEHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIFSGIIITISCFSNLFYESQFLLSKYGSNRVMNTADMTEIISKLPSDAVLCDPRIRKRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEECHHHHHHH KIHNQYNYIDSNITRQGIKLVNVCEAGNYVIHPKRLLLLESGYINDTSYEKPYYVKFTQS HHHHHHHHHCCHHHHHHHHEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCEEEEECHH DLQNLWPIFKIADNTKITRPAKVFLETDTATVYILDQQG HHHHCCHHEEECCCCCCCCCEEEEEEECCEEEEEEECCC >Mature Secondary Structure MMYDTRNQCLNTKYSVSHHHYQNIIIMFKLSSELKNLSKITLIGYSLIFLAIAVGFITRI CCCCCCHHHCCCCCCCCHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAVFQYVSFDIGPAPDQIKDAFTVINMWKGELPTLGPQAAVGGHHILPLYYYLFFPFTLL HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH GASPVFQAFPNALFSFLSIPLLIYLVYQLLENVEPQTRIMLSGLAGFWYSVLYGEIFISN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC FQWNPSSVPFFLIAFTLLYYFQMEGKFSLPIQAICWAVYGVVLAILMSLHSSTLFVMPVV CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH FIINCAIFIYKAVKRKSYSLITLPIISILASAIVLLPYWIGEFGRGFKNTKYILKTIFKA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH KSASDNSLLMSLGKRLSNLFLNYYKLFQEAYLWHPSWIYFLITLIFISLVTYLGIIKFKG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECC NQYIWGSLCATWGIYLYAASNLDSEITYFHYKLLIVFAPIVLTITSLAYNKFSQSKKRIL CEEEHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIFSGIIITISCFSNLFYESQFLLSKYGSNRVMNTADMTEIISKLPSDAVLCDPRIRKRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEECHHHHHHH KIHNQYNYIDSNITRQGIKLVNVCEAGNYVIHPKRLLLLESGYINDTSYEKPYYVKFTQS HHHHHHHHHCCHHHHHHHHEEEEECCCCEEECCCEEEEEECCCCCCCCCCCCEEEEECHH DLQNLWPIFKIADNTKITRPAKVFLETDTATVYILDQQG HHHHCCHHEEECCCCCCCCCEEEEEEECCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA