Click here to switch to the map view.

The map label for this gene is rcp1 [H]

Identifier: 17230390

GI number: 17230390

Start: 3537220

End: 3537729

Strand: Reverse

Name: rcp1 [H]

Synonym: all2898

Alternate gene names: 17230390

Gene position: 3537729-3537220 (Counterclockwise)

Preceding gene: 17230391

Following gene: 17230389

Centisome position: 55.16

GC content: 37.65

Gene sequence:

>510_bases
ATGTGTAGCAACATGACCAATTCAAAATTTAGAGAACTTTTAAGCACTCCCCAGATGATTGGTAACAACACCCAACCTTT
ATTAGTAATTGAAGATAGCGACGAAGACTTTGAAGCCTTCCAGCGAGTCATGCAACGAGAAGTAGTGTTAAATCCTGTTT
TTCGTTGCACTGATGGCGAGGATGCTTTAGATTTTCTCTACCATGCAGGAGCTTATCTCAACCTGGAAATGGCTCCTTGT
CCCTCGATTATTTTGCTTGATCTTAATTTACCGGGAACTGATGGACGAGAAGTATTAGCCCAAATTAAACAGGATCATAA
CCTGAGACATATTCCTGTGATTGTCCTCACAACTTCTTGTAATCCTAAAGATATTGAAATATGTTACCGATATTGCGTCG
CTAGTTATATCCTTAAGCCTATAGATATAAACCGTTTAGTTAAAACAATTCACAGTTTTTTAACTTACTGGTTAGATATT
GTGATTCTTCCTGATGCTGTTAGCAATTAG

Upstream 100 bases:

>100_bases
GGACTCACCATAGCCAAAAAAATTGTCGAACGACACGGCGGTAAAATTTGGGTGGAGTCAACCTACGGCGAAGGTAGTAC
GTTTTATTTCACGCTGCAAG

Downstream 100 bases:

>100_bases
TCATGGCACAACCGCTAACCGTTCTAATTATTGATGATTGTGTTGAAGATCGCCAAGTTTATCGCCGCTATCTCCAGCAA
GACCAAGAGCATAACTATAC

Product: two-component system response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MCSNMTNSKFRELLSTPQMIGNNTQPLLVIEDSDEDFEAFQRVMQREVVLNPVFRCTDGEDALDFLYHAGAYLNLEMAPC
PSIILLDLNLPGTDGREVLAQIKQDHNLRHIPVIVLTTSCNPKDIEICYRYCVASYILKPIDINRLVKTIHSFLTYWLDI
VILPDAVSN

Sequences:

>Translated_169_residues
MCSNMTNSKFRELLSTPQMIGNNTQPLLVIEDSDEDFEAFQRVMQREVVLNPVFRCTDGEDALDFLYHAGAYLNLEMAPC
PSIILLDLNLPGTDGREVLAQIKQDHNLRHIPVIVLTTSCNPKDIEICYRYCVASYILKPIDINRLVKTIHSFLTYWLDI
VILPDAVSN
>Mature_169_residues
MCSNMTNSKFRELLSTPQMIGNNTQPLLVIEDSDEDFEAFQRVMQREVVLNPVFRCTDGEDALDFLYHAGAYLNLEMAPC
PSIILLDLNLPGTDGREVLAQIKQDHNLRHIPVIVLTTSCNPKDIEICYRYCVASYILKPIDINRLVKTIHSFLTYWLDI
VILPDAVSN

Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: 2.7.3.-

Molecular weight: Translated: 19244; Mature: 19244

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSNMTNSKFRELLSTPQMIGNNTQPLLVIEDSDEDFEAFQRVMQREVVLNPVFRCTDGE
CCCCCCHHHHHHHHCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCHHEECCCCC
DALDFLYHAGAYLNLEMAPCPSIILLDLNLPGTDGREVLAQIKQDHNLRHIPVIVLTTSC
HHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEECCC
NPKDIEICYRYCVASYILKPIDINRLVKTIHSFLTYWLDIVILPDAVSN
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MCSNMTNSKFRELLSTPQMIGNNTQPLLVIEDSDEDFEAFQRVMQREVVLNPVFRCTDGE
CCCCCCHHHHHHHHCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCHHEECCCCC
DALDFLYHAGAYLNLEMAPCPSIILLDLNLPGTDGREVLAQIKQDHNLRHIPVIVLTTSC
HHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEEEECCC
NPKDIEICYRYCVASYILKPIDINRLVKTIHSFLTYWLDIVILPDAVSN
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9278513 [H]