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The map label for this gene is ruvB [H]

Identifier: 17230386

GI number: 17230386

Start: 3532795

End: 3533895

Strand: Reverse

Name: ruvB [H]

Synonym: all2894

Alternate gene names: 17230386

Gene position: 3533895-3532795 (Counterclockwise)

Preceding gene: 17230389

Following gene: 17230385

Centisome position: 55.1

GC content: 48.77

Gene sequence:

>1101_bases
ATGGCGATCATCTCCTCAAAAAAACAGCCCCCAGAACCCAACGGACAACCAAACAAGCGCCCGGAGTCAGCACCATCCGT
TCCCAAAGAGAAGGTTTTGCAACCTGAAGCTGCTATTGATGAGCAAGGTAAGCAAGAAGAAAGTATCAGACCACAAAGAT
TTGCCGACTACATCGGGCAGAAAGACCTGAAAGACGTGCTGGACATTGCCATCAAAGCAGCCAAGTCGCGGGGTGAAGTT
TTGGATCACTTGCTACTGTATGGCCCGCCAGGATTGGGTAAAACAACAATGGCAATGATATTAGCTTCGGAAATGGGAGT
CAATTACAAAATCACTAGTGCGCCTGCTTTAGAACGTCCCAGGGATATTGTCGGGCTACTAGTGAACCTCAAACCCGGTG
ATATTTTATTTATTGATGAAATCCATCGACTTTCGCGGATGACCGAAGAAATTCTCTATCCGGCAATGGAAGACTACCGC
TTAGATATCACGGTGGGTAAAGGTTCCAGCGCCCGGATTCGGAGTATACCTTTGTCCAAGTTTACCTTAGTGGGGGCAAC
AACCCGCGTGGGTGCATTAACTTCACCACTGCGCGATCGCTTCGGCTTAATTCAAAAACTGCGCTTTTACGAAGTTGACG
AACTCAGTCAAATAGTCCTGCGGAGCGCTCAGTTACTCCAAACCCAAGTTACCGACGACGGAGCCACAGAAATTGCCCGT
CGTTCACGGGGAACACCACGTATTGCCAATCGCTTACTTAAACGCGTCCGCGATTATGCACAGGTAAAATCCTGTGCAGA
AGTTAGCCAAAACATTGCCGCCGAAGCACTACAGCTATTTCAAGTAGACCCATGCGGACTCGATTGGACAGACCGCCGAA
TGCTCAGTGTGATTATCGAGCAGTTTAACGGTGGCCCCGTAGGTTTAGAAACAATCGCCGCCGCTACCGGAGAAGATACC
CAAACAATAGAAGAAGTATACGAACCTTACCTGATGCAAATTGGCTATCTCAGTCGGACTCCCCGTGGTCGCACAGCCAC
CAAAGCCGCATATAAACACATGGGCTTTACACCACCAAATGAGCAGCTATCTTTACTGTAG

Upstream 100 bases:

>100_bases
GTGTATTTTCTCACTAAAATCTTCGCCGCCATTTCTACTACCAGTATTACGGCGAAGAATTAACGCAAACAGTCCTAAAC
TTAGAGTTGCAAGCTGAATT

Downstream 100 bases:

>100_bases
TAATTAGTCAACAGTCAACAGTCAACAGTCAACCCAGATAATGATTAAGTTAATTAGTGTTGTTCTCAGCTTATTAGTTT
TATTTGGCTGGGTTACACCA

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MAIISSKKQPPEPNGQPNKRPESAPSVPKEKVLQPEAAIDEQGKQEESIRPQRFADYIGQKDLKDVLDIAIKAAKSRGEV
LDHLLLYGPPGLGKTTMAMILASEMGVNYKITSAPALERPRDIVGLLVNLKPGDILFIDEIHRLSRMTEEILYPAMEDYR
LDITVGKGSSARIRSIPLSKFTLVGATTRVGALTSPLRDRFGLIQKLRFYEVDELSQIVLRSAQLLQTQVTDDGATEIAR
RSRGTPRIANRLLKRVRDYAQVKSCAEVSQNIAAEALQLFQVDPCGLDWTDRRMLSVIIEQFNGGPVGLETIAAATGEDT
QTIEEVYEPYLMQIGYLSRTPRGRTATKAAYKHMGFTPPNEQLSLL

Sequences:

>Translated_366_residues
MAIISSKKQPPEPNGQPNKRPESAPSVPKEKVLQPEAAIDEQGKQEESIRPQRFADYIGQKDLKDVLDIAIKAAKSRGEV
LDHLLLYGPPGLGKTTMAMILASEMGVNYKITSAPALERPRDIVGLLVNLKPGDILFIDEIHRLSRMTEEILYPAMEDYR
LDITVGKGSSARIRSIPLSKFTLVGATTRVGALTSPLRDRFGLIQKLRFYEVDELSQIVLRSAQLLQTQVTDDGATEIAR
RSRGTPRIANRLLKRVRDYAQVKSCAEVSQNIAAEALQLFQVDPCGLDWTDRRMLSVIIEQFNGGPVGLETIAAATGEDT
QTIEEVYEPYLMQIGYLSRTPRGRTATKAAYKHMGFTPPNEQLSLL
>Mature_365_residues
AIISSKKQPPEPNGQPNKRPESAPSVPKEKVLQPEAAIDEQGKQEESIRPQRFADYIGQKDLKDVLDIAIKAAKSRGEVL
DHLLLYGPPGLGKTTMAMILASEMGVNYKITSAPALERPRDIVGLLVNLKPGDILFIDEIHRLSRMTEEILYPAMEDYRL
DITVGKGSSARIRSIPLSKFTLVGATTRVGALTSPLRDRFGLIQKLRFYEVDELSQIVLRSAQLLQTQVTDDGATEIARR
SRGTPRIANRLLKRVRDYAQVKSCAEVSQNIAAEALQLFQVDPCGLDWTDRRMLSVIIEQFNGGPVGLETIAAATGEDTQ
TIEEVYEPYLMQIGYLSRTPRGRTATKAAYKHMGFTPPNEQLSLL

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

Organism=Escherichia coli, GI1788167, Length=314, Percent_Identity=58.2802547770701, Blast_Score=393, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 40598; Mature: 40467

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIISSKKQPPEPNGQPNKRPESAPSVPKEKVLQPEAAIDEQGKQEESIRPQRFADYIGQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCCCHHCCCHHHHHHHHCH
KDLKDVLDIAIKAAKSRGEVLDHLLLYGPPGLGKTTMAMILASEMGVNYKITSAPALERP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCC
RDIVGLLVNLKPGDILFIDEIHRLSRMTEEILYPAMEDYRLDITVGKGSSARIRSIPLSK
HHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHCCHHCEEEEEEECCCCCCEEEECCCHH
FTLVGATTRVGALTSPLRDRFGLIQKLRFYEVDELSQIVLRSAQLLQTQVTDDGATEIAR
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RSRGTPRIANRLLKRVRDYAQVKSCAEVSQNIAAEALQLFQVDPCGLDWTDRRMLSVIIE
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QFNGGPVGLETIAAATGEDTQTIEEVYEPYLMQIGYLSRTPRGRTATKAAYKHMGFTPPN
HHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC
EQLSLL
CCCCCC
>Mature Secondary Structure 
AIISSKKQPPEPNGQPNKRPESAPSVPKEKVLQPEAAIDEQGKQEESIRPQRFADYIGQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHCCCCHHCCCHHHHHHHHCH
KDLKDVLDIAIKAAKSRGEVLDHLLLYGPPGLGKTTMAMILASEMGVNYKITSAPALERP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCC
RDIVGLLVNLKPGDILFIDEIHRLSRMTEEILYPAMEDYRLDITVGKGSSARIRSIPLSK
HHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHCCHHCEEEEEEECCCCCCEEEECCCHH
FTLVGATTRVGALTSPLRDRFGLIQKLRFYEVDELSQIVLRSAQLLQTQVTDDGATEIAR
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RSRGTPRIANRLLKRVRDYAQVKSCAEVSQNIAAEALQLFQVDPCGLDWTDRRMLSVIIE
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
QFNGGPVGLETIAAATGEDTQTIEEVYEPYLMQIGYLSRTPRGRTATKAAYKHMGFTPPN
HHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCC
EQLSLL
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA