| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is wbjE [H]
Identifier: 17230359
GI number: 17230359
Start: 3491419
End: 3492636
Strand: Direct
Name: wbjE [H]
Synonym: alr2867
Alternate gene names: 17230359
Gene position: 3491419-3492636 (Clockwise)
Preceding gene: 17230358
Following gene: 17230364
Centisome position: 54.44
GC content: 32.84
Gene sequence:
>1218_bases ATGGAAAAAATTGCAATTATTACTCAATATTTTTATCCTAGCTATGCTGCTACTGCCCAATTAATGACTGACTTAGCCAC AGGACTGTCCCAAAAAGGTTATCATGTGGATATATTTACAGGTTCTCAGGCAGATCATACTAAACCTGCATTATCCAACC TACTCACAGTCCAACGTGCCTTTTCTCCCATTGCATCTAGCACTAGTATTTTAAGTAAAGGGATTAGCTCAATATTTTTC CTGTTGGGAGGATTGAAATATTTATTATTTTCTCTACCCCATACTACTACTTTACTCATTGCATCTAATCCACCGTATGC AGGCCTTTTAGGTACTATTTTTAAAATTATTTGCGGTGGTAAATATTATTTTTTACTCCAAGATATATTCCCTGAATCTG CTGTAATGTCTGGCATTTTACAAAAAAATAGCTTTTCATTTATTTTTTTTAGTAAATTAAATTATTTAACTTATAAGTTT GCAGACAAAATTGTAGTACTCAGTACTTCTATGCAGTGCTTTTTAGAAAATAAATATCCTGAATTAAAACACAAAATTAA AGTAATTGAAAATTGGGCATTAGAAAATATTATTGGCTGTGATAAGCAAGAAAATGATTTTGCTAAACAGCACAATTTTG ATAAAAATTTCACAGTTTTATACTCCGGTAATTTGGGGAGATTGCATGATATAGAAACTATTACTGAAGCAGCCAAAATC CTAAAAGATAGTCCTATTCAATTTGTCTTTATTGGTGCTGGAGCGAAAACGAAATTAGTTGAGAAAGCAATTCAAACGGA TGGACTAAAGAATATAATTTTATTACCTTACCAGTCTAGAGAAGTGCTACCTCTATCTCTTACAGCTTGCGACATTTCAC TAGTTAGTCTAATACCTGGAGCAGAATCAATAGTTGCACCTTCTAAACTCTACGGAATGCTAGCCGCAGGTAGAGGAATT ATTGCTATCTCTGCAACCAATTCATACATCGATAAGCTTTTAACAAATTCTAATTGCGGTATAAATATACCTCCCCATAA TCCGCAACAACTTGCCAATTTAATCTATGAATTAGCTAATGACAACCAAAGAGTTAAGATAATGGGTGAAAAGGCACGTA AAATTTATGAAAGTAGATACACTTTTCAGCGTGCCTTAGAGGAATATCAACAAATTTTATTTGAAGATGATGCTTACCAA GAAATAAATATGCTGTAA
Upstream 100 bases:
>100_bases TCTACTTTATGCCATGTATGAATTTATGACAGTTGTCAAAATCATAGAACTAAGACGTAAAAAATCTGGATTACCTCTTT GATAACGCCAAAATAAATAC
Downstream 100 bases:
>100_bases CCTCTGGTCAGCAAAATCTCCTGCCAAAGTCGTGAAATTAGTCACAGTATCCGTTTTACTAATTTCAGTTTACGTCTCAT CTCATACTATTTGGATTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MEKIAIITQYFYPSYAATAQLMTDLATGLSQKGYHVDIFTGSQADHTKPALSNLLTVQRAFSPIASSTSILSKGISSIFF LLGGLKYLLFSLPHTTTLLIASNPPYAGLLGTIFKIICGGKYYFLLQDIFPESAVMSGILQKNSFSFIFFSKLNYLTYKF ADKIVVLSTSMQCFLENKYPELKHKIKVIENWALENIIGCDKQENDFAKQHNFDKNFTVLYSGNLGRLHDIETITEAAKI LKDSPIQFVFIGAGAKTKLVEKAIQTDGLKNIILLPYQSREVLPLSLTACDISLVSLIPGAESIVAPSKLYGMLAAGRGI IAISATNSYIDKLLTNSNCGINIPPHNPQQLANLIYELANDNQRVKIMGEKARKIYESRYTFQRALEEYQQILFEDDAYQ EINML
Sequences:
>Translated_405_residues MEKIAIITQYFYPSYAATAQLMTDLATGLSQKGYHVDIFTGSQADHTKPALSNLLTVQRAFSPIASSTSILSKGISSIFF LLGGLKYLLFSLPHTTTLLIASNPPYAGLLGTIFKIICGGKYYFLLQDIFPESAVMSGILQKNSFSFIFFSKLNYLTYKF ADKIVVLSTSMQCFLENKYPELKHKIKVIENWALENIIGCDKQENDFAKQHNFDKNFTVLYSGNLGRLHDIETITEAAKI LKDSPIQFVFIGAGAKTKLVEKAIQTDGLKNIILLPYQSREVLPLSLTACDISLVSLIPGAESIVAPSKLYGMLAAGRGI IAISATNSYIDKLLTNSNCGINIPPHNPQQLANLIYELANDNQRVKIMGEKARKIYESRYTFQRALEEYQQILFEDDAYQ EINML >Mature_405_residues MEKIAIITQYFYPSYAATAQLMTDLATGLSQKGYHVDIFTGSQADHTKPALSNLLTVQRAFSPIASSTSILSKGISSIFF LLGGLKYLLFSLPHTTTLLIASNPPYAGLLGTIFKIICGGKYYFLLQDIFPESAVMSGILQKNSFSFIFFSKLNYLTYKF ADKIVVLSTSMQCFLENKYPELKHKIKVIENWALENIIGCDKQENDFAKQHNFDKNFTVLYSGNLGRLHDIETITEAAKI LKDSPIQFVFIGAGAKTKLVEKAIQTDGLKNIILLPYQSREVLPLSLTACDISLVSLIPGAESIVAPSKLYGMLAAGRGI IAISATNSYIDKLLTNSNCGINIPPHNPQQLANLIYELANDNQRVKIMGEKARKIYESRYTFQRALEEYQQILFEDDAYQ EINML
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1788363, Length=104, Percent_Identity=40.3846153846154, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 45159; Mature: 45159
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIAIITQYFYPSYAATAQLMTDLATGLSQKGYHVDIFTGSQADHTKPALSNLLTVQRA CCCEEEEEEHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH FSPIASSTSILSKGISSIFFLLGGLKYLLFSLPHTTTLLIASNPPYAGLLGTIFKIICGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCC KYYFLLQDIFPESAVMSGILQKNSFSFIFFSKLNYLTYKFADKIVVLSTSMQCFLENKYP EEEEEEHHHCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCEEEEEECCHHHHHCCCCH ELKHKIKVIENWALENIIGCDKQENDFAKQHNFDKNFTVLYSGNLGRLHDIETITEAAKI HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHH LKDSPIQFVFIGAGAKTKLVEKAIQTDGLKNIILLPYQSREVLPLSLTACDISLVSLIPG HHCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEHHEEHHHHCCC AESIVAPSKLYGMLAAGRGIIAISATNSYIDKLLTNSNCGINIPPHNPQQLANLIYELAN CHHHCCHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHC DNQRVKIMGEKARKIYESRYTFQRALEEYQQILFEDDAYQEINML CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC >Mature Secondary Structure MEKIAIITQYFYPSYAATAQLMTDLATGLSQKGYHVDIFTGSQADHTKPALSNLLTVQRA CCCEEEEEEHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH FSPIASSTSILSKGISSIFFLLGGLKYLLFSLPHTTTLLIASNPPYAGLLGTIFKIICGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCC KYYFLLQDIFPESAVMSGILQKNSFSFIFFSKLNYLTYKFADKIVVLSTSMQCFLENKYP EEEEEEHHHCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCEEEEEECCHHHHHCCCCH ELKHKIKVIENWALENIIGCDKQENDFAKQHNFDKNFTVLYSGNLGRLHDIETITEAAKI HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHH LKDSPIQFVFIGAGAKTKLVEKAIQTDGLKNIILLPYQSREVLPLSLTACDISLVSLIPG HHCCCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEHHEEHHHHCCC AESIVAPSKLYGMLAAGRGIIAISATNSYIDKLLTNSNCGINIPPHNPQQLANLIYELAN CHHHCCHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHC DNQRVKIMGEKARKIYESRYTFQRALEEYQQILFEDDAYQEINML CCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10400585; 10828401; 12057956 [H]