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The map label for this gene is yibD [C]

Identifier: 17230328

GI number: 17230328

Start: 3456248

End: 3457216

Strand: Direct

Name: yibD [C]

Synonym: alr2836

Alternate gene names: 17230328

Gene position: 3456248-3457216 (Clockwise)

Preceding gene: 17230327

Following gene: 17230329

Centisome position: 53.89

GC content: 43.76

Gene sequence:

>969_bases
ATGAAAATTTCCGTCATCATCTCGAATTACAACTATGCTCGTTATCTTTCTAGAGCAATCAACTCTGTTCTCGCTCAAAC
TCACTCAGACATTGAAATCGTTATCGTAGATGATGGTTCTACAGATAACAGCCGTGATGTTATTACCCAACTGCAAGAAC
AAGCACCGGATAAAATCAAGCCCATCTTTCAAGCAAATCAAGGACAGGGAGGCGCTTTCAATGCGGGGTTTGCGGCGGCG
ACTGGCGAAGTCGTAGCTTTTCTTGATGCAGACGATGTGTGGAAACCTCATAAATTACAGCGTATTGTTGAGGTATTTCA
GACATCGGATGTAGTTGGTGTCATGCACCATTTGGATATCATAGATGGCAATGACAAAACAATTGATCAAGCTTCGACTC
AAGGGCCGAAACTGAGTGAAGATTTAGCCTCAGTCATATTGCAGACAGGGAATGCTTGGTGTTTTCCGCCCACGTCTGGA
CTAGCTTATCGTCGTGAAGTGCTGGAAAAAGTATTTCCCATCGATCCCGTGAAATGGCGCATTTGGGCTGATGGTTGCAT
TATTTACTGCACAGCCTTCCTCGGTAAAATTAAGACATTACAGGAAAATTTGGCGTACTATCGCATACATGGTGCGAACA
ATCACATGAGTGCAGCGAGCGCCACCAGTGAACAAGAAGCCAAATCTCAAGCGGGAATTGAGATGACGAACCAATATATC
AACGATTTTTTAGTACGTATTGGTTATGGTGCAAGAGTTGACTTATCCCGCAATCTCCAATATCGACGCACAAAATATTA
TCAACGCTCTCAATGGGATCTCCGGGAGGTGTGGGGTATCTCACGCTTAATACTGGGATGGCCTTTTTACTCTGGGCAAG
AGCGAGCCTATTACCTAGCTCGATTTTTATTCAAAAGTGGAAAATTTTTGCTTCGTTCCGATGTTCATACGGAAAGCACC
ACAATTTAG

Upstream 100 bases:

>100_bases
TTTTTCAAATCGGTATAACTCCCCAATCCCCAATCCCCAATCTCCAGTCCCCAATCCCCAATCCCCAATCCCCAATCCCC
AGTCCCCAATCCCCAATCCC

Downstream 100 bases:

>100_bases
CCGTAAGTATGTTTAGCCGTTATCTCTCCTCCTTTGAAGGCGCTGTTAGCGATAGCGGGGCGTTCAGCCCGTGCTGAGTA
CTGAGTAAAAATCCCAGTCT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MKISVIISNYNYARYLSRAINSVLAQTHSDIEIVIVDDGSTDNSRDVITQLQEQAPDKIKPIFQANQGQGGAFNAGFAAA
TGEVVAFLDADDVWKPHKLQRIVEVFQTSDVVGVMHHLDIIDGNDKTIDQASTQGPKLSEDLASVILQTGNAWCFPPTSG
LAYRREVLEKVFPIDPVKWRIWADGCIIYCTAFLGKIKTLQENLAYYRIHGANNHMSAASATSEQEAKSQAGIEMTNQYI
NDFLVRIGYGARVDLSRNLQYRRTKYYQRSQWDLREVWGISRLILGWPFYSGQERAYYLARFLFKSGKFLLRSDVHTEST
TI

Sequences:

>Translated_322_residues
MKISVIISNYNYARYLSRAINSVLAQTHSDIEIVIVDDGSTDNSRDVITQLQEQAPDKIKPIFQANQGQGGAFNAGFAAA
TGEVVAFLDADDVWKPHKLQRIVEVFQTSDVVGVMHHLDIIDGNDKTIDQASTQGPKLSEDLASVILQTGNAWCFPPTSG
LAYRREVLEKVFPIDPVKWRIWADGCIIYCTAFLGKIKTLQENLAYYRIHGANNHMSAASATSEQEAKSQAGIEMTNQYI
NDFLVRIGYGARVDLSRNLQYRRTKYYQRSQWDLREVWGISRLILGWPFYSGQERAYYLARFLFKSGKFLLRSDVHTEST
TI
>Mature_322_residues
MKISVIISNYNYARYLSRAINSVLAQTHSDIEIVIVDDGSTDNSRDVITQLQEQAPDKIKPIFQANQGQGGAFNAGFAAA
TGEVVAFLDADDVWKPHKLQRIVEVFQTSDVVGVMHHLDIIDGNDKTIDQASTQGPKLSEDLASVILQTGNAWCFPPTSG
LAYRREVLEKVFPIDPVKWRIWADGCIIYCTAFLGKIKTLQENLAYYRIHGANNHMSAASATSEQEAKSQAGIEMTNQYI
NDFLVRIGYGARVDLSRNLQYRRTKYYQRSQWDLREVWGISRLILGWPFYSGQERAYYLARFLFKSGKFLLRSDVHTEST
TI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family

Homologues:

Organism=Escherichia coli, GI1790044, Length=166, Percent_Identity=33.1325301204819, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI1787259, Length=144, Percent_Identity=28.4722222222222, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2836_NOSS1 (P22639)

Other databases:

- EMBL:   BA000019
- EMBL:   AF031959
- PIR:   AE2160
- PIR:   B35391
- RefSeq:   NP_486876.1
- ProteinModelPortal:   P22639
- SMR:   P22639
- STRING:   P22639
- GeneID:   1106434
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr2836
- NMPDR:   fig|103690.1.peg.3143
- eggNOG:   COG0463
- HOGENOM:   HBG139716
- OMA:   LRPRIMI
- ProtClustDB:   CLSK379288
- BioCyc:   NSP103690:ALR2836-MONOMER
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36389; Mature: 36389

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISVIISNYNYARYLSRAINSVLAQTHSDIEIVIVDDGSTDNSRDVITQLQEQAPDKIK
CEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHH
PIFQANQGQGGAFNAGFAAATGEVVAFLDADDVWKPHKLQRIVEVFQTSDVVGVMHHLDI
HHHCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHEE
IDGNDKTIDQASTQGPKLSEDLASVILQTGNAWCFPPTSGLAYRREVLEKVFPIDPVKWR
ECCCCCCCHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEE
IWADGCIIYCTAFLGKIKTLQENLAYYRIHGANNHMSAASATSEQEAKSQAGIEMTNQYI
EEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHCCCCHHHHHHHCCHHHHHHHH
NDFLVRIGYGARVDLSRNLQYRRTKYYQRSQWDLREVWGISRLILGWPFYSGQERAYYLA
HHHHHHHCCCCEEEHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH
RFLFKSGKFLLRSDVHTESTTI
HHHHHCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MKISVIISNYNYARYLSRAINSVLAQTHSDIEIVIVDDGSTDNSRDVITQLQEQAPDKIK
CEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCHHHH
PIFQANQGQGGAFNAGFAAATGEVVAFLDADDVWKPHKLQRIVEVFQTSDVVGVMHHLDI
HHHCCCCCCCCCCCCCCEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHEE
IDGNDKTIDQASTQGPKLSEDLASVILQTGNAWCFPPTSGLAYRREVLEKVFPIDPVKWR
ECCCCCCCHHCCCCCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEE
IWADGCIIYCTAFLGKIKTLQENLAYYRIHGANNHMSAASATSEQEAKSQAGIEMTNQYI
EEECCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHCCCCHHHHHHHCCHHHHHHHH
NDFLVRIGYGARVDLSRNLQYRRTKYYQRSQWDLREVWGISRLILGWPFYSGQERAYYLA
HHHHHHHCCCCEEEHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH
RFLFKSGKFLLRSDVHTESTTI
HHHHHCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840; 2111805