Click here to switch to the map view.

The map label for this gene is 17230301

Identifier: 17230301

GI number: 17230301

Start: 3418575

End: 3419219

Strand: Direct

Name: 17230301

Synonym: alr2809

Alternate gene names: NA

Gene position: 3418575-3419219 (Clockwise)

Preceding gene: 17230299

Following gene: 161353747

Centisome position: 53.3

GC content: 35.97

Gene sequence:

>645_bases
ATGCTGCGAGGAAATATGCTGTTAACTGAACTTCGTGCTGATCGGGTAGTTCTCCATAATATTAGTTGGCAACAATTTGA
GAATTTATTAGTAAATTTAGGTGAAAGTAGAGCAGCTAGGATTGCTTACGATGATGGCACTTTAGAGATTATGACCCCAT
TACCAGAACACGAATATTATAAAGAAATAATTGGTGACATTATCAAAGATACGGCTGAAGTTTTAGAGTTAGATTATGAA
TGTTATGGTTCAACTACCTGGAAACGAGAATTAAAAAAGGCTGGGATAGAATCTGACAATTGCTTTTATTTCCAAAATGA
AGCCTTAATTAGAGGTAAGCTCAGTTTTGATTTAAATCAAGACCCACCTCCAGATTTAGCTTTAGAAATTGATGTTACGA
GTAAATCATTAGATAGATTTCCTCTCTATGTTCGGTTAGGTGTGCCTGAAATCTGGTGTTATGATGCTGGAGACATCAAA
ATTTACCAATTGCAAGGTGAGAAATATATCCAAACCGAAACAAGTTTAGTATTTCCTAATTTAAATATTCAAGAAATTCC
ATCACTAATTGAAAGATACCGCATGGCGGGAAGGCGGGTATTTCGACAAGTAATTAGGGAATGGGTACGAGGACAGATGG
GGTAA

Upstream 100 bases:

>100_bases
GAAAGTTCCGTGGGAAGAAGGTGGTTAGGGTTGGGAAATATTTATCAATCATCATTGATAAAATGAAGTAGGTTGACACT
CCTCAGCCTAATACTCACTG

Downstream 100 bases:

>100_bases
AGCGATCGCACCTGCCTCTATATAATCAAGTTGGGTATTACCCACTCTGAGTACAATCTAGCTATTAAAAAGTCACCACA
CTGCGAATCGATTCACCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MLRGNMLLTELRADRVVLHNISWQQFENLLVNLGESRAARIAYDDGTLEIMTPLPEHEYYKEIIGDIIKDTAEVLELDYE
CYGSTTWKRELKKAGIESDNCFYFQNEALIRGKLSFDLNQDPPPDLALEIDVTSKSLDRFPLYVRLGVPEIWCYDAGDIK
IYQLQGEKYIQTETSLVFPNLNIQEIPSLIERYRMAGRRVFRQVIREWVRGQMG

Sequences:

>Translated_214_residues
MLRGNMLLTELRADRVVLHNISWQQFENLLVNLGESRAARIAYDDGTLEIMTPLPEHEYYKEIIGDIIKDTAEVLELDYE
CYGSTTWKRELKKAGIESDNCFYFQNEALIRGKLSFDLNQDPPPDLALEIDVTSKSLDRFPLYVRLGVPEIWCYDAGDIK
IYQLQGEKYIQTETSLVFPNLNIQEIPSLIERYRMAGRRVFRQVIREWVRGQMG
>Mature_214_residues
MLRGNMLLTELRADRVVLHNISWQQFENLLVNLGESRAARIAYDDGTLEIMTPLPEHEYYKEIIGDIIKDTAEVLELDYE
CYGSTTWKRELKKAGIESDNCFYFQNEALIRGKLSFDLNQDPPPDLALEIDVTSKSLDRFPLYVRLGVPEIWCYDAGDIK
IYQLQGEKYIQTETSLVFPNLNIQEIPSLIERYRMAGRRVFRQVIREWVRGQMG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24959; Mature: 24959

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGNMLLTELRADRVVLHNISWQQFENLLVNLGESRAARIAYDDGTLEIMTPLPEHEYY
CCCCCCHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCHHHH
KEIIGDIIKDTAEVLELDYECYGSTTWKRELKKAGIESDNCFYFQNEALIRGKLSFDLNQ
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCEEEEEEEEECCCC
DPPPDLALEIDVTSKSLDRFPLYVRLGVPEIWCYDAGDIKIYQLQGEKYIQTETSLVFPN
CCCCCEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCEEEEEECCCEEEECCCEEEECC
LNIQEIPSLIERYRMAGRRVFRQVIREWVRGQMG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLRGNMLLTELRADRVVLHNISWQQFENLLVNLGESRAARIAYDDGTLEIMTPLPEHEYY
CCCCCCHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCCHHHH
KEIIGDIIKDTAEVLELDYECYGSTTWKRELKKAGIESDNCFYFQNEALIRGKLSFDLNQ
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEECCEEEEEEEEECCCC
DPPPDLALEIDVTSKSLDRFPLYVRLGVPEIWCYDAGDIKIYQLQGEKYIQTETSLVFPN
CCCCCEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCEEEEEECCCEEEECCCEEEECC
LNIQEIPSLIERYRMAGRRVFRQVIREWVRGQMG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA