| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is glgP [H]
Identifier: 17230298
GI number: 17230298
Start: 3414155
End: 3416368
Strand: Reverse
Name: glgP [H]
Synonym: all2806
Alternate gene names: 17230298
Gene position: 3416368-3414155 (Counterclockwise)
Preceding gene: 17230300
Following gene: 17230297
Centisome position: 53.27
GC content: 46.52
Gene sequence:
>2214_bases ATGTCTCAGAGCAGTGCAAATACAGCAGCCTTACATTTAAGTGAAAAGCTACCTTTTTCCCTCAAGCGATTAGCAGATTT AGCTTATAATTATTGGTGGAGTTGGAGTGGCGATCGCCTAGCATTATTCCAAGCCATTGATCCCCAAGAGTGGGAACGCT GTGGACATAACCCAGTGGCAATTTTAGAGTCAGTCAGCTACGAACGCCTCACCCAGTTAGCTGAAGACCCGTTTTATCTC AAGCAAGTTTCTGCCTTGGCGCAGGAGTTTGACCAATATATCAACCAGAAAGATACTTGGGTGAGTCGAGTAGCGCCCCA AGTTTCCCACGAAAACCCCGTTGCTTATTTTTGTGCCGAATTTGGTATTCATGAATCTCTACCAATTTACTCTGGTGGGT TGGGGATTTTGGCTGGGGATCACCTGAAATCATCATCCGATTTGGGTGTACCGTTGGTGGGTATTGGCTTGCTATATCGC CAAGGTTATTTTCGTCAGCGCTTGAGCCGTCAAGGTTGGCAAGAAGATTATTATGTGGATAATTCCTTCCATCGGATGCC CATTGAGTTGATTAAAAATGAGCATGGGGAACCACTAACAATTAAATTGGAGATTCGCCAGCGTCAGGTAACAGTGCAAA TCTGGCGCGTGCAAGTAGGAAGGGTAAGTTTATATTTACTCGATAGCGATCGCCATGACAATGATCCCATTGACCGTTGG TTGACAGGACATTTATACGGTGGGAATACAGAAACCCGCATCGCCCAAGAAGTCGTCTTAGGAATTGGCGGTGTGAGAGC GTTGCAAGCCTTGGGGATCAAACCTTCTGTCTATCACCTCAACGAAGGTCATGCCGCTTTCTGTACCTTAGAAATTGCCC GTCTGGAAATCGAACGCACAGGTAAATCCTTCTACGATATTGAAGCCAGTGTGCGGAATAGTTGCGTATTCACCACCCAT ACACCAGTTCCCGCCGGTCACGATGTCTTCTCACCCGATTTAATTGACTCCTTCTTTGCCCACTACTGGACACAATTACG TCTCTCCCGTGAACAATTCTTAGCTTTAGGCGCACGGCGATTAGGTGACCCCTGGGAACCCTTTGGTATGACTGTGTTAG CCTTGCGAATGTCCCGCGCTTGTAACGGTGTGAGTGAACTACATGGTCAAGTATCCCGCAAGATGTGGACTGTCCTCTAT CCCCAAAGGTCGGAGGAGAAAGTACCAATTGGTTACATTACCAATGGTGTACACGCACCCACCTGGACAGCACCTTTATT AGCCGACTTATATAATCAATACTTGGGTGCAGACTGGAGAACCCAAGCCATTGATCCCAAAATGTGGGCAAAAGTGGACG ACATCCCCGATGAGGAATTATGGTCACGCCATCTCATCCTCAAAGAAAGATTAGTCGCCTACACCCGTTATAAAGTCAGA AAATCACGGGAACATCGGGGTGAAGACCAAAGACTCATTCAAGCCAGTGATAGTCTACTAGATCCCAAAATCCTCACCAT TGGTTTTGCTAGACGCTTCAGCCCTTACAAACGTGGCGACTTAATTTTACGTGATGCAGAACGAGCGTTACGCATTTTCA GCAACGCTGAACGTCCAGTGCAGATAGTGTTTGCCGGCAAAGCCCACCCAGCCGATGAAGAAGGTAAGCGGATTATCCAA CGCTTGATGGAATGGTGTCATAATTCAGGCATTATTAACCGTGTCGCCTTTATTGAAGATTACGACATTTACACAGGGCA GAAATTAGTCCAAGGTGTGGATGTGTGGTTAAATAATCCCCGTCGTCCCCTAGAAGCATCGGGAACAAGTGGACAGAAAG TCTGCTTCAACGGTGGGATTAATTGCAGCGTCCTTGATGGTTGGTGGTGTGAAGGTTATCAAGCCGATGCAAATGGTAAA GGCTTAAATGGTTGGGCGATTGGTGAAGATGCTCACACCAGCGACCAAGAATTACAAGACCGCATTGATTCCCAATCCCT GTATAAGTTGCTAGAAGAGGAAATTGTACCTCTATACTACGACCAAGATGCCAACGGGATTCCCCATCGTTGGGTGCAAG TCATGAAAGCATCCATCAAAACCAATGCACCATTATTTAATACAGACAGAATGATTGCTGACTACGTTACACAGGTGTAT GTACCAGAAATCTCTACCCGTGTGCAGCCAATTTTAGCTAAGGTTCTGCTGTAG
Upstream 100 bases:
>100_bases CAAGACGTTTACTAATGCTGTGTTGTCAACCATACAGCAAGAAAGTATTTCTTTGATAACCGCAAGTATCTCACACGTAA TTTCCAAAGCGTAGAATTTT
Downstream 100 bases:
>100_bases CTAATAATCTAAGTTTCCTGGTTCGGTAAGGGGGTAGTATATCTACCCCTTTTTTTGGTAATTATTGATAAGGATTAATT AAATTATCTAGCCTTTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 737; Mature: 736
Protein sequence:
>737_residues MSQSSANTAALHLSEKLPFSLKRLADLAYNYWWSWSGDRLALFQAIDPQEWERCGHNPVAILESVSYERLTQLAEDPFYL KQVSALAQEFDQYINQKDTWVSRVAPQVSHENPVAYFCAEFGIHESLPIYSGGLGILAGDHLKSSSDLGVPLVGIGLLYR QGYFRQRLSRQGWQEDYYVDNSFHRMPIELIKNEHGEPLTIKLEIRQRQVTVQIWRVQVGRVSLYLLDSDRHDNDPIDRW LTGHLYGGNTETRIAQEVVLGIGGVRALQALGIKPSVYHLNEGHAAFCTLEIARLEIERTGKSFYDIEASVRNSCVFTTH TPVPAGHDVFSPDLIDSFFAHYWTQLRLSREQFLALGARRLGDPWEPFGMTVLALRMSRACNGVSELHGQVSRKMWTVLY PQRSEEKVPIGYITNGVHAPTWTAPLLADLYNQYLGADWRTQAIDPKMWAKVDDIPDEELWSRHLILKERLVAYTRYKVR KSREHRGEDQRLIQASDSLLDPKILTIGFARRFSPYKRGDLILRDAERALRIFSNAERPVQIVFAGKAHPADEEGKRIIQ RLMEWCHNSGIINRVAFIEDYDIYTGQKLVQGVDVWLNNPRRPLEASGTSGQKVCFNGGINCSVLDGWWCEGYQADANGK GLNGWAIGEDAHTSDQELQDRIDSQSLYKLLEEEIVPLYYDQDANGIPHRWVQVMKASIKTNAPLFNTDRMIADYVTQVY VPEISTRVQPILAKVLL
Sequences:
>Translated_737_residues MSQSSANTAALHLSEKLPFSLKRLADLAYNYWWSWSGDRLALFQAIDPQEWERCGHNPVAILESVSYERLTQLAEDPFYL KQVSALAQEFDQYINQKDTWVSRVAPQVSHENPVAYFCAEFGIHESLPIYSGGLGILAGDHLKSSSDLGVPLVGIGLLYR QGYFRQRLSRQGWQEDYYVDNSFHRMPIELIKNEHGEPLTIKLEIRQRQVTVQIWRVQVGRVSLYLLDSDRHDNDPIDRW LTGHLYGGNTETRIAQEVVLGIGGVRALQALGIKPSVYHLNEGHAAFCTLEIARLEIERTGKSFYDIEASVRNSCVFTTH TPVPAGHDVFSPDLIDSFFAHYWTQLRLSREQFLALGARRLGDPWEPFGMTVLALRMSRACNGVSELHGQVSRKMWTVLY PQRSEEKVPIGYITNGVHAPTWTAPLLADLYNQYLGADWRTQAIDPKMWAKVDDIPDEELWSRHLILKERLVAYTRYKVR KSREHRGEDQRLIQASDSLLDPKILTIGFARRFSPYKRGDLILRDAERALRIFSNAERPVQIVFAGKAHPADEEGKRIIQ RLMEWCHNSGIINRVAFIEDYDIYTGQKLVQGVDVWLNNPRRPLEASGTSGQKVCFNGGINCSVLDGWWCEGYQADANGK GLNGWAIGEDAHTSDQELQDRIDSQSLYKLLEEEIVPLYYDQDANGIPHRWVQVMKASIKTNAPLFNTDRMIADYVTQVY VPEISTRVQPILAKVLL >Mature_736_residues SQSSANTAALHLSEKLPFSLKRLADLAYNYWWSWSGDRLALFQAIDPQEWERCGHNPVAILESVSYERLTQLAEDPFYLK QVSALAQEFDQYINQKDTWVSRVAPQVSHENPVAYFCAEFGIHESLPIYSGGLGILAGDHLKSSSDLGVPLVGIGLLYRQ GYFRQRLSRQGWQEDYYVDNSFHRMPIELIKNEHGEPLTIKLEIRQRQVTVQIWRVQVGRVSLYLLDSDRHDNDPIDRWL TGHLYGGNTETRIAQEVVLGIGGVRALQALGIKPSVYHLNEGHAAFCTLEIARLEIERTGKSFYDIEASVRNSCVFTTHT PVPAGHDVFSPDLIDSFFAHYWTQLRLSREQFLALGARRLGDPWEPFGMTVLALRMSRACNGVSELHGQVSRKMWTVLYP QRSEEKVPIGYITNGVHAPTWTAPLLADLYNQYLGADWRTQAIDPKMWAKVDDIPDEELWSRHLILKERLVAYTRYKVRK SREHRGEDQRLIQASDSLLDPKILTIGFARRFSPYKRGDLILRDAERALRIFSNAERPVQIVFAGKAHPADEEGKRIIQR LMEWCHNSGIINRVAFIEDYDIYTGQKLVQGVDVWLNNPRRPLEASGTSGQKVCFNGGINCSVLDGWWCEGYQADANGKG LNGWAIGEDAHTSDQELQDRIDSQSLYKLLEEEIVPLYYDQDANGIPHRWVQVMKASIKTNAPLFNTDRMIADYVTQVYV PEISTRVQPILAKVLL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Escherichia coli, GI2367228, Length=385, Percent_Identity=23.6363636363636, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 84086; Mature: 83955
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSSANTAALHLSEKLPFSLKRLADLAYNYWWSWSGDRLALFQAIDPQEWERCGHNPVA CCCCCCCCEEEEECCCCCHHHHHHHHHHHHCEEECCCCEEEEEECCCHHHHHHCCCCHHH ILESVSYERLTQLAEDPFYLKQVSALAQEFDQYINQKDTWVSRVAPQVSHENPVAYFCAE HHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEHHHH FGIHESLPIYSGGLGILAGDHLKSSSDLGVPLVGIGLLYRQGYFRQRLSRQGWQEDYYVD HCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEC NSFHRMPIELIKNEHGEPLTIKLEIRQRQVTVQIWRVQVGRVSLYLLDSDRHDNDPIDRW CCCCCCCHHHHHCCCCCEEEEEEEEECCEEEEEEEEEEECEEEEEEEECCCCCCCCHHHH LTGHLYGGNTETRIAQEVVLGIGGVRALQALGIKPSVYHLNEGHAAFCTLEIARLEIERT EEEEEECCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCEEEEEEEEEHHHHHHC GKSFYDIEASVRNSCVFTTHTPVPAGHDVFSPDLIDSFFAHYWTQLRLSREQFLALGARR CCCEEEEEHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH LGDPWEPFGMTVLALRMSRACNGVSELHGQVSRKMWTVLYPQRSEEKVPIGYITNGVHAP CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCCEEEEECCCCCC TWTAPLLADLYNQYLGADWRTQAIDPKMWAKVDDIPDEELWSRHLILKERLVAYTRYKVR CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KSREHRGEDQRLIQASDSLLDPKILTIGFARRFSPYKRGDLILRDAERALRIFSNAERPV HHHHHCCCHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCCEEEHHHHHHHHHHHCCCCCE QIVFAGKAHPADEEGKRIIQRLMEWCHNSGIINRVAFIEDYDIYTGQKLVQGVDVWLNNP EEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEHEEEEECCCCCCHHHHHHHHHHHHCCC RRPLEASGTSGQKVCFNGGINCSVLDGWWCEGYQADANGKGLNGWAIGEDAHTSDQELQD CCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEECCCCCCCCCCEECCCCCCCCHHHHHH RIDSQSLYKLLEEEIVPLYYDQDANGIPHRWVQVMKASIKTNAPLFNTDRMIADYVTQVY HHCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VPEISTRVQPILAKVLL CCHHHHHHHHHHHHHCC >Mature Secondary Structure SQSSANTAALHLSEKLPFSLKRLADLAYNYWWSWSGDRLALFQAIDPQEWERCGHNPVA CCCCCCCEEEEECCCCCHHHHHHHHHHHHCEEECCCCEEEEEECCCHHHHHHCCCCHHH ILESVSYERLTQLAEDPFYLKQVSALAQEFDQYINQKDTWVSRVAPQVSHENPVAYFCAE HHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEHHHH FGIHESLPIYSGGLGILAGDHLKSSSDLGVPLVGIGLLYRQGYFRQRLSRQGWQEDYYVD HCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEC NSFHRMPIELIKNEHGEPLTIKLEIRQRQVTVQIWRVQVGRVSLYLLDSDRHDNDPIDRW CCCCCCCHHHHHCCCCCEEEEEEEEECCEEEEEEEEEEECEEEEEEEECCCCCCCCHHHH LTGHLYGGNTETRIAQEVVLGIGGVRALQALGIKPSVYHLNEGHAAFCTLEIARLEIERT EEEEEECCCCHHHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCEEEEEEEEEHHHHHHC GKSFYDIEASVRNSCVFTTHTPVPAGHDVFSPDLIDSFFAHYWTQLRLSREQFLALGARR CCCEEEEEHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH LGDPWEPFGMTVLALRMSRACNGVSELHGQVSRKMWTVLYPQRSEEKVPIGYITNGVHAP CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCCCCCCCEEEEECCCCCC TWTAPLLADLYNQYLGADWRTQAIDPKMWAKVDDIPDEELWSRHLILKERLVAYTRYKVR CCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH KSREHRGEDQRLIQASDSLLDPKILTIGFARRFSPYKRGDLILRDAERALRIFSNAERPV HHHHHCCCHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCCEEEHHHHHHHHHHHCCCCCE QIVFAGKAHPADEEGKRIIQRLMEWCHNSGIINRVAFIEDYDIYTGQKLVQGVDVWLNNP EEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEHEEEEECCCCCCHHHHHHHHHHHHCCC RRPLEASGTSGQKVCFNGGINCSVLDGWWCEGYQADANGKGLNGWAIGEDAHTSDQELQD CCCCCCCCCCCCEEEECCCCEEEEECCCCCCCEECCCCCCCCCCEECCCCCCCCHHHHHH RIDSQSLYKLLEEEIVPLYYDQDANGIPHRWVQVMKASIKTNAPLFNTDRMIADYVTQVY HHCHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VPEISTRVQPILAKVLL CCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]