| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230213
Identifier: 17230213
GI number: 17230213
Start: 3316785
End: 3317528
Strand: Reverse
Name: 17230213
Synonym: all2721
Alternate gene names: NA
Gene position: 3317528-3316785 (Counterclockwise)
Preceding gene: 17230216
Following gene: 17230212
Centisome position: 51.73
GC content: 35.48
Gene sequence:
>744_bases ATGCAAACATTACCTAAGCCATCATTTTTAAATGGTTACTGGCAAAATTCATTTAACTTAAAGCAGCATATACAGGAGTT TTTAAATATAGATGCAGAAACGCTAGAAACAAAGTTAGAGTTCAGTCAGCAACAAATGGCTGAATTGGGTCACAAAGATT TTGACTGGGAAAAAGCCACAGCTTTTTATCGTGACAAAGTACGGGAATCTTATTTATTTGAATTGGGTGCATGGCATTTA ACTAGCCAAGATTATATAGGCGATACGCTGCGTTTGGTGGCGGATTATAGTCAGGGTCGAGTGTTAGATTTTGGTGGGGG TATTGGCACTCACGCCATTGGTGCTGCTCTTTGTCCTCAAGTTGAGCAAGTAATTTATTGCGATATTAATCCTATTAATC GTGATTTTGTGAAGTATAGAGCCGAAAAGTTGGGTTTAAATGAAAAGATAACTTTCTGTCTTGAAGTCCCGCCACAAGAA AATTTTGACACCATCATATCTTTTGATGTTTTAGAACATTTACCAGACCCCAGTTTGCAATTAATCAACTTTTACGAAAT TCTGAACAACGAAGGAAAGATTATACTCAACTGGTGTTTCTTTAAGGGTTTTAATCAAGAGTATCCCTTTCATATAGATG ACCATCAAGTAATAGAGCAATTTTTTAAAATTCTGCAAACCAAATACTTAGAATTGTTTCAGCCTTATAATATTACTGCT CGATGTTATCGTAAATGGAGATAA
Upstream 100 bases:
>100_bases TTTTACATCAATAGAAAAATGATCAATTTGCTTGATCGTTATTTTTCTGCACTATTATAAGGTATCATACATAAGTTGTA TTTCTTATATTACAGAGATT
Downstream 100 bases:
>100_bases GATTTATGGGTAACAATAGACCTAATTAATTTATTAATAACATCAGTAAAAATTCGATTAATTACAATCAAATGACTTCA TCTCCAAGCGACTTACTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MQTLPKPSFLNGYWQNSFNLKQHIQEFLNIDAETLETKLEFSQQQMAELGHKDFDWEKATAFYRDKVRESYLFELGAWHL TSQDYIGDTLRLVADYSQGRVLDFGGGIGTHAIGAALCPQVEQVIYCDINPINRDFVKYRAEKLGLNEKITFCLEVPPQE NFDTIISFDVLEHLPDPSLQLINFYEILNNEGKIILNWCFFKGFNQEYPFHIDDHQVIEQFFKILQTKYLELFQPYNITA RCYRKWR
Sequences:
>Translated_247_residues MQTLPKPSFLNGYWQNSFNLKQHIQEFLNIDAETLETKLEFSQQQMAELGHKDFDWEKATAFYRDKVRESYLFELGAWHL TSQDYIGDTLRLVADYSQGRVLDFGGGIGTHAIGAALCPQVEQVIYCDINPINRDFVKYRAEKLGLNEKITFCLEVPPQE NFDTIISFDVLEHLPDPSLQLINFYEILNNEGKIILNWCFFKGFNQEYPFHIDDHQVIEQFFKILQTKYLELFQPYNITA RCYRKWR >Mature_247_residues MQTLPKPSFLNGYWQNSFNLKQHIQEFLNIDAETLETKLEFSQQQMAELGHKDFDWEKATAFYRDKVRESYLFELGAWHL TSQDYIGDTLRLVADYSQGRVLDFGGGIGTHAIGAALCPQVEQVIYCDINPINRDFVKYRAEKLGLNEKITFCLEVPPQE NFDTIISFDVLEHLPDPSLQLINFYEILNNEGKIILNWCFFKGFNQEYPFHIDDHQVIEQFFKILQTKYLELFQPYNITA RCYRKWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29160; Mature: 29160
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLPKPSFLNGYWQNSFNLKQHIQEFLNIDAETLETKLEFSQQQMAELGHKDFDWEKAT CCCCCCCCHHCCHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AFYRDKVRESYLFELGAWHLTSQDYIGDTLRLVADYSQGRVLDFGGGIGTHAIGAALCPQ HHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH VEQVIYCDINPINRDFVKYRAEKLGLNEKITFCLEVPPQENFDTIISFDVLEHLPDPSLQ HHEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHH LINFYEILNNEGKIILNWCFFKGFNQEYPFHIDDHQVIEQFFKILQTKYLELFQPYNITA HHHHHHHHCCCCCEEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCHHH RCYRKWR HHHHCCC >Mature Secondary Structure MQTLPKPSFLNGYWQNSFNLKQHIQEFLNIDAETLETKLEFSQQQMAELGHKDFDWEKAT CCCCCCCCHHCCHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AFYRDKVRESYLFELGAWHLTSQDYIGDTLRLVADYSQGRVLDFGGGIGTHAIGAALCPQ HHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH VEQVIYCDINPINRDFVKYRAEKLGLNEKITFCLEVPPQENFDTIISFDVLEHLPDPSLQ HHEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCHH LINFYEILNNEGKIILNWCFFKGFNQEYPFHIDDHQVIEQFFKILQTKYLELFQPYNITA HHHHHHHHCCCCCEEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCHHH RCYRKWR HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA