| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230169
Identifier: 17230169
GI number: 17230169
Start: 3247587
End: 3248264
Strand: Reverse
Name: 17230169
Synonym: all2677
Alternate gene names: NA
Gene position: 3248264-3247587 (Counterclockwise)
Preceding gene: 17230173
Following gene: 17230168
Centisome position: 50.65
GC content: 43.66
Gene sequence:
>678_bases ATGAATGATTCTTATCTAGAAAGATTGTGTCAGCAAACCATCACTGCATCAGAGTTAATATCTCTGTTGGCAGGTTATCA GATGCTACCTCAACTATATCGTGAGTTGTTAATTGACCAAGCCATAGCCTCTATAGAATGTACTCCAGAAGAAATAGAGC AGGCAAAACAGGAAGATCCTCAACAGACAACAGCACTAGCAACTAGAAAATTACGGTTAGAGAAATTTAAACAAGCGACT TGGGGACATAAAGTAGAGTCTTATTTCCTCACCCAAAAAGCCCAACTAGACCAGGTAACTTATTCTCTGCTACGAACCCG TGATATGGCACTAGCTCAAGAATTATACTTTCGGATTAAAGCCAAAGAGCAAAGTTTTGCGGAAATTGCCCGTCAATACT CCCAAGGGCCGGAAGCACAGACAGGCGGATTAATCGGCCCCACACCCCTTACCCAACCCCATCCCCAGTTAGTAGCCAAA CTCCGCGCCAGTCAACCAGGACAACTATTACCCCCCACGCGTCTAGGGGAATGGATAGTTATTGTGCGGTTAGAACAGAT GGTTCACGCCAAATTAGATGACTCTACGCGGAAAAAACTCCTGAATAAACTCTTCCAGGAATGGTTACAAGAATCATTAC AAGCAACTTTAAATAAAACTCTGTGTACCTCCGCGTGA
Upstream 100 bases:
>100_bases CGTAATTCTTATTGAATGTTATCAACTTGATCAAGCAATTTGCAACAGTAATTACTATTGCAAACATTACATCCCACCAA ACTGTCCACTTGATTTTGCA
Downstream 100 bases:
>100_bases ACCTCCGCGATACTACCCTGCGGGAACGCTTATCAGCGAATGCGTTTGAAAAGATTTTATTTCACGCAGAGGCGCAGAGA CGCAGAGAGTTTGAGAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MNDSYLERLCQQTITASELISLLAGYQMLPQLYRELLIDQAIASIECTPEEIEQAKQEDPQQTTALATRKLRLEKFKQAT WGHKVESYFLTQKAQLDQVTYSLLRTRDMALAQELYFRIKAKEQSFAEIARQYSQGPEAQTGGLIGPTPLTQPHPQLVAK LRASQPGQLLPPTRLGEWIVIVRLEQMVHAKLDDSTRKKLLNKLFQEWLQESLQATLNKTLCTSA
Sequences:
>Translated_225_residues MNDSYLERLCQQTITASELISLLAGYQMLPQLYRELLIDQAIASIECTPEEIEQAKQEDPQQTTALATRKLRLEKFKQAT WGHKVESYFLTQKAQLDQVTYSLLRTRDMALAQELYFRIKAKEQSFAEIARQYSQGPEAQTGGLIGPTPLTQPHPQLVAK LRASQPGQLLPPTRLGEWIVIVRLEQMVHAKLDDSTRKKLLNKLFQEWLQESLQATLNKTLCTSA >Mature_225_residues MNDSYLERLCQQTITASELISLLAGYQMLPQLYRELLIDQAIASIECTPEEIEQAKQEDPQQTTALATRKLRLEKFKQAT WGHKVESYFLTQKAQLDQVTYSLLRTRDMALAQELYFRIKAKEQSFAEIARQYSQGPEAQTGGLIGPTPLTQPHPQLVAK LRASQPGQLLPPTRLGEWIVIVRLEQMVHAKLDDSTRKKLLNKLFQEWLQESLQATLNKTLCTSA
Specific function: Unknown
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25671; Mature: 25671
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDSYLERLCQQTITASELISLLAGYQMLPQLYRELLIDQAIASIECTPEEIEQAKQEDP CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH QQTTALATRKLRLEKFKQATWGHKVESYFLTQKAQLDQVTYSLLRTRDMALAQELYFRIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKEQSFAEIARQYSQGPEAQTGGLIGPTPLTQPHPQLVAKLRASQPGQLLPPTRLGEWIV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHCHHHH IVRLEQMVHAKLDDSTRKKLLNKLFQEWLQESLQATLNKTLCTSA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNDSYLERLCQQTITASELISLLAGYQMLPQLYRELLIDQAIASIECTPEEIEQAKQEDP CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH QQTTALATRKLRLEKFKQATWGHKVESYFLTQKAQLDQVTYSLLRTRDMALAQELYFRIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKEQSFAEIARQYSQGPEAQTGGLIGPTPLTQPHPQLVAKLRASQPGQLLPPTRLGEWIV HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHCHHHH IVRLEQMVHAKLDDSTRKKLLNKLFQEWLQESLQATLNKTLCTSA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA